Tenacibaculum pacificus: PG913_01755
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Entry
PG913_01755 CDS
T08859
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
tpac
Tenacibaculum pacificus
Pathway
tpac02020
Two-component system
tpac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PG913_01755 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PG913_01755 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpac03021
]
PG913_01755 (rpoN)
Transcription machinery [BR:
tpac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PG913_01755 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
DUF6621
SF3b1
Motif
Other DBs
NCBI-ProteinID:
WBX73995
LinkDB
All DBs
Position
complement(390578..392038)
Genome browser
AA seq
486 aa
AA seq
DB search
MLKQSLHYKLLQKLSPQQIQLMKLIQLPTQAFEERLKQEIEENPALDTGKEEPENFEDTL
TDSEDFDEGTEKIDTNDINIDEYLSDDEYPSYKTQANNYSADDEERQIPYAAGTSFHQSL
NNQLNTYRINEEERAIADFLVGSIDDSGYIRREIIDLVDDLAFTQNVFTSEEKVEDILIN
VVQKLDPIGVGARDLKECLIIQLKSKSVKETRTFAIDILENAFDHFVKKHYKKLLEKFNI
EEDQLKEIITEIGKLNPKPGSSYAGNNKLAEQIVPDFSIQIIDGNLELTLNSRNAPELHV
SREYNNMLKGYSDSKKKSKSQKDAVMFIKQKLDAAKWFIDAIKQRQQTLLITMNAIMLRQ
EAYFLTGDERKLKPMILKDIADEIHMDVSTVSRVANSKYVTTPYGTKLIKVFFSESMKND
QGEDVSTREIKKILETVIQEEDKRKPLTDEKLSKILKEKGYPIARRTVAKYREQLDISVA
RLRKEI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaaagtttacattataagttacttcaaaaattatcgcctcaacaaattcag
ttgatgaagttaattcaattgcctacacaagcttttgaagaacgtttaaagcaagaaatt
gaagaaaaccctgctttagatactggtaaagaagaaccagaaaactttgaagatacttta
acagattctgaagattttgatgaaggaactgaaaaaatagatactaatgatatcaatatt
gatgagtatttaagcgatgatgaatatccgagttataaaacacaagcaaacaattattca
gccgatgatgaagaaaggcaaattccgtatgcagctggaacaagttttcatcaatcatta
aataatcaattaaatacttacagaattaatgaagaagaacgtgctattgctgatttttta
gtaggaagtattgatgatagtggttatataagaagagaaattatcgatttagtagatgat
ttagccttcacgcaaaatgtttttacatccgaagaaaaagtagaagatattttaattaat
gtagttcaaaaattagatcctattggtgttggtgctcgtgatttaaaagagtgtttaatt
attcaattaaaatcaaaatcagtaaaagaaacaagaacatttgctattgatattcttgaa
aatgcattcgatcactttgttaaaaagcattacaaaaaacttcttgaaaaatttaatatt
gaagaagatcaacttaaagaaataattactgaaatcggaaaattaaatccgaaacctggt
agttcgtatgcaggaaataataaattagcagaacaaatagttcctgatttttcaatacaa
attattgatggaaatttagaattgactttaaactctcgtaatgcacctgaattacatgtt
tctcgtgaatacaataatatgttaaaaggttatagcgattctaaaaagaaaagcaaaagt
caaaaagatgctgtaatgtttattaagcagaaattagatgctgcaaaatggtttattgat
gctataaaacaacgtcaacaaaccttgttaattactatgaatgctataatgctacgtcag
gaagcatattttttaacaggtgacgagcgtaagctaaaaccgatgattttaaaagatatt
gctgatgaaatacacatggatgtctctactgtttcaagagttgcaaatagtaaatatgta
acaacgccttacggaactaaattgattaaagtatttttctctgaatcgatgaaaaatgac
caaggtgaagatgtatctacacgtgaaattaaaaaaatactagaaacagttattcaagaa
gaagataaacgaaagcctcttacagatgaaaaattatctaaaatattaaaagaaaaaggt
tatccaattgcaagaagaactgttgctaaataccgtgagcaattagatatttcggtagca
aggttacgtaaagaaatataa
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