Tenacibaculum pacificus: PG913_05290
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Entry
PG913_05290 CDS
T08859
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tpac
Tenacibaculum pacificus
Pathway
tpac02024
Quorum sensing
tpac03060
Protein export
tpac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PG913_05290 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PG913_05290 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PG913_05290 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tpac02044
]
PG913_05290 (ffh)
Enzymes [BR:
tpac01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PG913_05290 (ffh)
Secretion system [BR:
tpac02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PG913_05290 (ffh)
Eukaryotic Sec-SRP protein
PG913_05290 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
CLP1_P
KTI12
Zeta_toxin
AAA_17
APS_kinase
AAA_31
nSTAND3
AAA_30
AAA_33
SRPRB
cobW
AAA_18
AAA_14
ArsA_ATPase
ATP_bind_1
AAA
AAA_16
NACHT
TsaE
MMR_HSR1
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WBX74800
LinkDB
All DBs
Position
1152672..1154000
Genome browser
AA seq
442 aa
AA seq
DB search
MFNNLSEKLDKALHTLKGHGKITEVNVAETLKEVRRALLDADVNFKIAKDFTKRVQQKAI
GQDVLTTLNPGQLMVKLVKDELTDLMGGDTVGINLGGSMSVILMSGLQGSGKTTFSGKLA
NFLKTKKSKEVLLVGCDVYRPAAINQLQVVGEQIGVEVYAEVDNKNPIEISENAIKRTKA
TGKNVVIIDTAGRLAVDQEMMDEISNIHKAINPQETLFVVDSMTGQDAVNTAKAFNDILN
FDGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMDAIDIFHPDRMADRILGMGDVI
SLVERAQEQYDEDEARKLQKKIAKDQFGFDDFLSQIQQIKKMGSMKDLVGMIPGAGKALK
DVEIDEGAFTGIEAIIQSMTPFERSNPASIDANRKKRIAKGSGTSIQEINQLMKQFNQMS
KMMKMMQGGGGKKMMQMMQNMK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataatttaagtgaaaagttagataaagcgttacatacgcttaaaggacacggg
aaaattacagaagttaatgttgctgaaacactaaaagaagttcgtagagctttattagat
gccgatgttaactttaaaattgcgaaagactttactaaaagagtacaacaaaaagccata
ggacaagacgtattaacaacgttaaacccagggcaattaatggttaaattagttaaagat
gaattgactgatttaatgggtggtgacactgttggtattaatttaggtggttcaatgagt
gttatcctaatgtctggtttacaggggtctggtaaaactactttttcaggaaaattagcg
aacttcttaaaaactaaaaaatcgaaagaagtattattagttggttgtgatgtttatcgt
cctgcggctattaatcagttacaagttgttggagaacaaattggtgttgaagtgtatgcg
gaagtagacaataaaaacccaattgaaatttctgaaaatgcaattaagcgtacaaaggca
acgggtaaaaatgtagttattattgatactgctggtcgtttagctgttgatcaggaaatg
atggatgaaatttcaaacattcataaagctataaatcctcaagaaacattatttgttgta
gattctatgacaggtcaagatgctgtaaatacggcaaaggcttttaatgatattttaaat
tttgacggtgttgtacttaccaaattagatggtgatacacgtggtggagctgcgttatct
attaaatcagttgttaataaacctattaagtttattggtactggtgaaaagatggatgca
attgatatttttcacccagatcgtatggcagatcgtattttaggaatgggagatgttatc
tcattagtagaacgtgcccaagaacaatacgatgaagacgaagctagaaaacttcagaaa
aaaattgcaaaagatcaatttggttttgatgactttttaagtcaaattcaacaaatcaaa
aagatgggtagcatgaaagatttagtaggaatgattcctggtgctggtaaagccttaaaa
gatgttgaaattgatgaaggtgcttttacaggtattgaagcaattatacaatcgatgact
ccgtttgaaagaagtaatcctgcttctattgatgcaaatcgtaaaaaacgaattgcaaaa
ggttctggtacatcaatacaagaaattaatcagttgatgaagcaattcaatcaaatgagt
aaaatgatgaagatgatgcaaggcggtggcggaaaaaaaatgatgcaaatgatgcaaaac
atgaaatag
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