Tenacibaculum pacificus: PG913_05450
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Entry
PG913_05450 CDS
T08859
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpac
Tenacibaculum pacificus
Pathway
tpac03420
Nucleotide excision repair
tpac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PG913_05450
03430 Mismatch repair
PG913_05450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpac03400
]
PG913_05450
Enzymes [BR:
tpac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG913_05450
DNA repair and recombination proteins [BR:
tpac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG913_05450
MMR (mismatch excision repair)
Other MMR factors
PG913_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
ResIII
ERF
AAA_11
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WBX74623
LinkDB
All DBs
Position
1187705..1190035
Genome browser
AA seq
776 aa
AA seq
DB search
MNTYLEQLNEPQRAAVLQKDGPMIIIAGAGSGKTRVLTYRIAHLMEQGIDSFNILSLTFT
NKAAREMKERIGGVVGTSEAKNLWMGTFHSVFSRILRSESDRLGYPSNFTIYDTQDSVRL
ISSIIKEMQLDKEQYKPKQILSRISSFKNSLITVRAYSLNPELQEADLKARRPRVGDIYK
AYVDRCFKAGAMDFDDLLLRTNELLTRFPEVLAKYQNRFKYIMVDEYQDTNHSQYLIVKA
LADRFQNICVVGDDSQSIYSFRGANINNILNFQKDYPDVKTFKLEQNYRSTNNIVEAANS
VIDKNKTKLDKEVWTANDAGESIKIMRTISDGEEGRFVAQSILDNKEEHQLTNDSFAILY
RTNAQSRAMEDALRKKDIKYKIYGGISFYQRKEIKDLLSYLRILINPNDEEALKRIINYP
ARGIGASTMDKLAIAADHYNKSIFDILVNINTIDLKINAGTKNKLANFTRMIQRFQIEAQ
KMNAFEIADLVVKRIELVQDLQKDGTQEGVNKVENIQELLNGIKDFITDKIETGDDASLP
IFLEDVALATDFDSETDDTPMVSLMTIHLSKGLEYPYVYIVGLEEGLFPSAMSMTTRSEL
EEERRLFYVALTRAEKVAYLTYAKTRYRWGKLTDGDPSRFLEEIAPEFVEYLSPKISGRL
ENRFMDDDLFDTNDFSRKIRFEKPIQKQRKEFISKKEKPNLIPSKSKLKIKPQLNIPINL
FSGEINIGNFVEHNRFGTGEVIALEGKGPNKKAEIKFGTVGKKKLLLQFAKLKVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacttatttagagcaacttaacgaaccacaaagagcagccgttttacaaaaagat
ggcccaatgataattatagcaggagcaggatctggtaaaacacgagttttaacttatcgt
attgctcatttaatggaacaaggaattgattcttttaatattttatcgctaacatttaca
aacaaagcagcacgtgaaatgaaagaacgtattggcggagttgttggaactagtgaggct
aaaaatttatggatgggaacttttcattctgttttttctcgaattttaagatcggaatca
gaccgtttagggtatccttctaattttacaatttacgatacacaagattctgttcgttta
atatcaagtattatcaaagaaatgcaacttgataaagagcagtataaaccaaaacaaatt
ttaagtagaatttcatcttttaaaaatagtttaataactgttcgtgcttattctttaaat
ccagaattgcaagaagccgatttaaaagccagaagacctagagtaggtgatatttataaa
gcttatgttgatagatgtttcaaagctggagcaatggattttgatgatttattgttaaga
acaaatgaattgttaactcgttttcctgaagtattagctaaatatcaaaatcgttttaaa
tatattatggttgatgagtatcaagatacaaatcattcgcaatatttaattgtaaaagct
ttggctgatcgttttcagaatatttgtgttgttggtgatgattcgcaaagtatttatagt
ttccgtggagctaacatcaataatattttaaattttcaaaaagattatcctgatgttaaa
acctttaaactagaacaaaattatcgatcaacaaataatattgtagaagctgcaaatagt
gttatcgataaaaataaaacaaagttagataaggaagtctggactgcaaatgatgcaggt
gaaagcattaaaataatgcgtactatttctgatggtgaagaaggtcgttttgttgcacaa
tctattttagataataaagaagagcatcaattaacaaatgattcgtttgctattttatac
agaaccaatgcgcaatcaagagcaatggaagatgctttgcgtaaaaaagatatcaaatat
aaaatttacggaggaatctctttttatcaacgaaaagaaataaaagatttattatcatat
ttacgtattttaataaatccgaatgatgaagaagcattaaagcgaattattaattatcca
gcaagaggaattggagctagtactatggataaattagcaatagctgctgatcattataat
aaatcaatctttgatattttggtaaatataaataccatcgatttaaaaataaatgcagga
actaaaaataaattagctaattttacaagaatgattcagcgttttcaaatagaagcgcaa
aaaatgaatgcttttgaaattgctgatttagtcgtaaaacgaattgaactagttcaagat
ttacaaaaagacggtacacaagaaggtgtaaataaagttgaaaatattcaagaattatta
aatggtataaaagattttattacagataaaattgaaacaggcgatgatgcatcattacct
atatttttagaagatgtggcgttggcaacagattttgatagtgaaactgatgatacaccg
atggtttcattaatgacaattcatttatcaaaaggattagaatatccgtatgtatatatt
gtaggtttagaagaaggtttgtttccttcggcaatgagtatgactactcgtagtgaacta
gaagaagaacgtcgtttgttttatgtagccttaactagagctgaaaaagttgcttattta
acatatgcaaaaactcgttatcgttgggggaaattaacagatggagatcctagtcgtttt
ttagaagaaatcgctcctgaatttgtagagtatttatcacctaaaatttcaggaagacta
gaaaatcgatttatggatgatgatttgtttgatacaaatgatttttctagaaaaataaga
tttgaaaaaccaatacaaaaacaacgaaaagaatttatatctaaaaaagaaaagcctaat
ttaataccttcaaaaagtaaactgaaaataaagcctcaattaaatataccaatcaattta
ttttcaggagaaattaatattggtaattttgtagagcataatcgttttggaactggtgaa
gtaattgccttagaaggaaaaggacctaataaaaaagcagaaattaaatttggtacggtt
ggtaaaaagaaattattattacaatttgcaaaactaaaggtaatcggataa
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