Tenacibaculum pacificus: PG913_05580
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Entry
PG913_05580 CDS
T08859
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tpac
Tenacibaculum pacificus
Pathway
tpac00260
Glycine, serine and threonine metabolism
tpac00460
Cyanoamino acid metabolism
tpac00630
Glyoxylate and dicarboxylate metabolism
tpac00670
One carbon pool by folate
tpac00680
Methane metabolism
tpac01100
Metabolic pathways
tpac01110
Biosynthesis of secondary metabolites
tpac01120
Microbial metabolism in diverse environments
tpac01200
Carbon metabolism
tpac01230
Biosynthesis of amino acids
tpac01240
Biosynthesis of cofactors
tpac04981
Folate transport and metabolism
Module
tpac_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PG913_05580
09102 Energy metabolism
00680 Methane metabolism
PG913_05580
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PG913_05580
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PG913_05580
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PG913_05580
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PG913_05580
Enzymes [BR:
tpac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PG913_05580
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WBX74644
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All DBs
Position
1218320..1219594
Genome browser
AA seq
424 aa
AA seq
DB search
MQKDHQIFDLIQEEKERQLNGLELIASENFVSEQVMEAQGSILTNKYAEGYPGKRYYGGC
EVVDVVEQIAIDRAKELFGAEYVNVQPHSGSQANTAVFAACLNPGDTILGFDLSHGGHLT
HGSPVNFSGKLYNPVFYGVDKETGQIDYNHLEQQAKEHKPKLIIAGASAYSRDMDFAKFR
EIADSVGAILMADISHPAGLIAKGILSDPIPHCHIVTTTTHKTLRGPRGGIIMIGKDFEN
PFGLKLKSGKLKKMSTLINSSVFPGNQGGPLEHVIAAKAVAFGEALTDEFLEYQIQVKEN
AQAMAKAFVAKGYNIISGGTDNHCMLIDLRNKDITGKDAEIALGKADITVNKNMVPFDTQ
SPFVTSGIRIGTSAITTRGLQEEDMQVVVDLIDAAIQNATNEEKLSEISEDVHNLMQHRR
LFIM
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagatcatcaaatatttgatttaattcaagaagaaaaagaacgtcagctaaat
ggtttagaattgattgcttctgaaaactttgtaagcgaacaagtaatggaagctcaaggt
tctattttaacaaacaaatacgccgaaggataccctggtaaacgttattacggtgggtgt
gaagttgtagatgttgtagagcaaatagcaattgacagagctaaagaattatttggagct
gaatacgtaaatgttcaaccacattcaggttcacaagctaatacggcagtttttgcggca
tgtttaaaccctggagatactattttaggttttgacttgtctcacggaggacacttaaca
cacggatcacctgtaaatttttcaggaaaattatataatcctgttttttacggagtagat
aaagaaactggtcaaattgattataatcatttagaacaacaagctaaagaacataagcca
aaattaataatcgcaggagcttcggcatattctcgtgatatggattttgcaaagtttaga
gaaattgctgatagtgttggtgctattttaatggcagatatttctcatccagcaggttta
attgctaaaggaattttatctgacccaatacctcattgtcatattgtaacgacaactact
cataaaacattacgtggaccacgtggtggaattattatgattggtaaagattttgaaaat
ccttttggattaaaattaaaatcaggaaagttaaagaaaatgtcaacattgataaattct
tcagtttttccaggaaatcaaggtggacctttagaacacgttattgctgctaaagctgtt
gcttttggtgaagctttaactgatgagtttttagaataccaaattcaagtaaaagaaaac
gcacaagcaatggcgaaagcttttgtagcaaaaggatacaatattatttctggaggaaca
gacaatcactgtatgttaatcgatttaagaaataaagatattactggtaaagatgctgaa
atagcattaggaaaagcagatattactgtaaacaagaacatggttccttttgatactcaa
agtccatttgtaacttcaggtatccgtattggtacttctgcaattactactcgtggttta
caggaagaggatatgcaagtagttgttgatttaattgatgcagctattcaaaatgcgaca
aacgaagaaaaacttagtgaaattagtgaagatgttcataatttaatgcaacaccgtaga
ctatttataatgtaa
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