Tenacibaculum pacificus: PG913_07425
Help
Entry
PG913_07425 CDS
T08859
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tpac
Tenacibaculum pacificus
Pathway
tpac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PG913_07425 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpac03400
]
PG913_07425 (priA)
Enzymes [BR:
tpac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG913_07425 (priA)
DNA repair and recombination proteins [BR:
tpac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PG913_07425 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
WHD_PriA_bact
ResIII
HTH_65
Zn_ribbon_PriA
Helicase_C
PriA_C
nSTAND3
AAA_30
Nrap_D6
AAA_19
AAA_11
nSTAND_NTPase5
SRP54
NPHP3_N
Zn_ribbon_6
AAA_22
SLFN-g3_helicase
Viral_helicase1
nSTAND6
PIF1
tRNA_synt_1c_R1
Zot
Cript
IstB_IS21
GDH_HM1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
WBX72742
LinkDB
All DBs
Position
complement(1659477..1661918)
Genome browser
AA seq
813 aa
AA seq
DB search
MYFIDVILPIPLKKTFTYSVNEAEFSFLKKGMRVAVSFGKSKIYTALVFDIHQNAPESYK
AKDINQILDEFPIVNELQLKHWQWISSYYMCSLGDVYRAALPSAFILESETIIYKNETFT
DENSLTDEEFLIFEALQNSSQLTIHEVANIIDKKNVLPIIDTLINKEAAFIKEEIYETYK
PKLVKYVRLNAMHQSNEALQKLLENLSRAKKQREAVLTYFQLSIAKKPIKAKDLEEKSGV
SSSILKALVDKEIFEFYQIQTDRINFKGATNQIKELNDFQQQSFNEIKTSFKTQNVTLLH
GVTGSGKTEIYVKLIKEVVAEGKQVLFLLPEIALTTQIIARLQRYFGDFISVFHSKYSMN
ERVEVWNNVLENKPKAQIILGARSSGFLPFSNLGLIVVDEEHETSYKQFEPSPRYNARDT
AIVLAHLHKAKVLLGSATPSLESYFNAKQNKYGFVELTRRFGNIQLPKIELIDVKEKQRK
KEMKGLFSDRLLKMINDALEVKEQVILFQNRRGFSPVVECTTCGVSPQCPNCDVSLTFHK
FRRELKCHYCQYQRAMPNNCGACGSTTLDTKGFGTEQIELELKTLFPNHNIGRMDLDTTR
GKYGYQKIIGAFEAQEIDILVGTQMLSKGLDFENVSLVGILNADSMLNFPDFRAHERAYQ
LMVQVSGRAGRSKKQGKVAIQTYNPNHQILQQVSTTNYSEMYKEQLQDRWQFHYPPYYKL
IKITLKHKDPVRVERGVNWLVKSLQNAFGENVLGPTTPAVSRIRNLYIKNLVIKIPPKQS
LGKTKELIGKVKNSFEGVKDFRSIRFIMDVDAY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatcgacgttatattacctattcctttaaaaaaaacatttacgtattctgta
aatgaagcagaattttcatttcttaaaaaaggaatgcgagtagctgtttcttttggaaaa
agtaaaatttatacggcacttgtttttgatattcatcaaaatgcacctgaatcttataaa
gcaaaagatattaatcaaattttagatgaatttcctattgtaaacgaattacagttaaaa
cattggcagtggatttcgagttattatatgtgttcgttaggtgatgtttacagagcagct
ttgccatcggcatttatactagaaagtgaaactattatttataaaaatgaaacttttact
gatgaaaattctttaacagatgaagagtttttaatttttgaagcactacaaaatagttct
caattaactattcatgaagttgctaatattatcgataaaaaaaatgttttacctattatt
gatactttaattaataaagaagctgcttttattaaagaagaaatttacgaaacatataaa
ccaaaattagtaaaatatgttcgtttaaatgcgatgcatcaatctaatgaagcacttcaa
aaattattagaaaatttatcaagagcaaaaaaacaacgagaagcagtacttacttatttt
caattatcaattgctaaaaaaccaataaaagcaaaagatttagaagagaaatcaggcgta
tcatcatcaatattaaaagcattagttgataaagaaatttttgaattttatcaaattcaa
acagatagaatcaattttaaaggagcaactaatcaaataaaagaattaaatgattttcaa
cagcaatcttttaacgaaattaaaacatcttttaaaactcaaaatgtaacattattacac
ggagttacaggttcaggaaaaacagaaatttatgtaaaactgataaaagaagttgttgca
gaaggaaaacaagtattgtttttattgccagaaatagctttaacaactcaaataattgca
cgattacaacgttattttggcgattttatatccgtttttcattcaaaatattcaatgaat
gaacgtgtagaagtttggaataacgtattagaaaataaaccaaaagcacaaattatttta
ggcgctcgttcatcagggtttttacctttttcaaacttaggtttaattgttgttgatgaa
gaacatgaaacatcatacaaacaatttgagccatcaccaagatacaatgctcgtgatacg
gctattgttttagcacatttacataaagcaaaagtgttgttaggttctgcaactccatca
ttagaaagttattttaatgcgaaacaaaataaatatggttttgttgaattaactcgtcgt
tttggaaatattcaattgcccaaaatagagctaatcgatgtaaaagaaaaacaacgaaaa
aaggaaatgaaaggtttgttttcagaccgtttattaaaaatgattaatgatgctttagag
gtaaaagaacaagtgattttgtttcagaatcgtcgtggtttttctcctgttgttgaatgt
actacttgcggagtttctccacaatgcccaaattgtgatgtgagtttaacatttcataaa
tttagaagggaattaaaatgtcattattgtcaatatcaacgtgctatgcctaataattgt
ggtgcttgtggaagtacaactcttgatacaaaaggttttggaacagaacaaattgagtta
gaattaaaaacattatttcctaatcataatattggaagaatggatttagataccacacga
ggtaaatatggttatcaaaaaataattggagcttttgaagctcaagaaatagatatttta
gtaggaacacaaatgttatcaaaaggattagattttgaaaatgtatcattagtaggtatt
ttaaatgccgattctatgttgaatttcccagattttcgagcgcatgaacgagcttatcaa
ttaatggttcaggtttcgggtagggcaggacgtagcaaaaaacaagggaaagtagctata
caaacttataatccgaatcatcaaatattacagcaagtttctacgactaattattctgaa
atgtataaagaacaattgcaagatcgttggcaatttcattatccaccttattataaattg
attaaaattacgctaaaacataaagatccagttcgtgttgaaagaggggtgaattggcta
gtaaaatcattacaaaatgcttttggcgaaaatgttttaggaccaacaaccccagcagta
tcacgtattcgaaatttatatattaaaaatttagtgattaaaattccgccaaaacaatcg
ctaggaaaaacaaaagaattaataggtaaagttaaaaattcttttgaaggtgtgaaagat
tttagatcaatccgttttattatggatgtggatgcttattaa
DBGET
integrated database retrieval system
