Tenacibaculum pacificus: PG913_10525
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Entry
PG913_10525 CDS
T08859
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tpac
Tenacibaculum pacificus
Pathway
tpac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG913_10525 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpac03019
]
PG913_10525 (groL)
03110 Chaperones and folding catalysts [BR:
tpac03110
]
PG913_10525 (groL)
03029 Mitochondrial biogenesis [BR:
tpac03029
]
PG913_10525 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpac04147
]
PG913_10525 (groL)
Enzymes [BR:
tpac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PG913_10525 (groL)
Messenger RNA biogenesis [BR:
tpac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PG913_10525 (groL)
Chaperones and folding catalysts [BR:
tpac03110
]
Heat shock proteins
HSP60 / Chaperonin
PG913_10525 (groL)
Mitochondrial biogenesis [BR:
tpac03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PG913_10525 (groL)
Exosome [BR:
tpac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PG913_10525 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PG913_10525 (groL)
Exosomal proteins of breast cancer cells
PG913_10525 (groL)
Exosomal proteins of colorectal cancer cells
PG913_10525 (groL)
Exosomal proteins of bladder cancer cells
PG913_10525 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
WBX73280
LinkDB
All DBs
Position
2307806..2309434
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDVDARNGLKRGVDALANAVKVTLGPKGRNVIISKAFGAPHVTKDGVTVAKEIE
LEDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVQEGLKNVAAGANPMDLKRGID
KAVIAITEDLAKQAKEVGDSSEKIQQVASISANNDKVIGDLIATAFTKVGKEGVITVEEA
KGMETYVDVVEGMQFDRGYLSPYFVTDADKMIATLDNPYILLFDKKISNLQEILPILEPV
SQAGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFSLENATLDLLGTAETVTIDKDNTTVVNGAGDDTQIKARVNQVKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKKVLKAITTENLDETTGIQIVYKAIEAPLRTIVENAGGEGSVVINKVLEGKKGFGYDA
KSEAYVDMLEAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEEAAAMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatgtagacgctcgtaacggtttaaaacgtggagttgat
gcattagcaaatgcagtaaaagtaactttaggtcctaaaggacgtaacgtaattatttcg
aaagctttcggtgctcctcacgttacaaaagatggtgttactgttgctaaagaaattgaa
ttagaagatcctttagaaaatatgggagctcaaatggttaaagaagtagcatctaaaact
aacgatttagctggtgatggaactacaactgcaactgtattagctcaagctattgtacaa
gaaggtttaaaaaatgttgctgcgggtgcaaatcctatggatttaaaacgtggtattgat
aaagccgttattgcaattactgaagatttagctaaacaagctaaagaagttggtgattca
tcagaaaaaatacaacaagtagcttctatctctgctaataatgataaagttattggagat
ttaattgcaactgcttttactaaagttggtaaagaaggtgtaattactgttgaagaagct
aaaggaatggaaacttatgttgacgttgtggaaggtatgcaattcgatagaggttattta
tcgccttactttgttaccgatgctgataaaatgattgctactttagataatccttatatc
ttattatttgataaaaagatttctaacttacaagaaattcttccaatattagagcctgtt
tctcaagctggaagacctttattaattattgctgaagatgttgacggacaagcattagct
actttagtagttaataaattacgtggtggtttaaaaattgctgctgtaaaagctcctggt
tttggtgatcgtagaaaagcaatgttagaagatattgctatcttaactggtggaactgtt
atttctgaagaaagaggtttctctttagaaaatgctactttagatttattaggtactgct
gaaacagttactattgataaagataatactactgttgttaatggtgctggtgatgataca
caaattaaagcacgtgtaaatcaagttaaagctcaaattgaaactactacttctgattac
gataaagaaaaattacaagaacgtttagctaagttagctggtggtgttgcagttttatat
gttggtgctgcttctgaagtagaaatgaaagaaaagaaagatcgtgttgatgatgcttta
catgcaactcgtgctgctgtagaagaaggtattgttgctggtggtggtgttgctttagtt
cgtgctaaaaaagttttaaaagctattacaactgaaaacttagacgaaactacaggtata
caaattgtttacaaagcaattgaagcgcctttaagaactattgttgaaaatgcaggtggt
gaaggatcagttgttattaacaaagttttagaaggtaaaaaaggatttggttatgatgct
aaatctgaagcttatgttgatatgcttgaagctggtattattgaccctaaaaaagtaact
cgtgttgctttagaaaatgcagcatctgttgcagggatgattttaactaccgaatgtgct
ttaattgatattaaagaagaagctgctgctatgcctccaatgggtggtggtatgccagga
atgatgtaa
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