Tenacibaculum pacificus: PG913_11110
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Entry
PG913_11110 CDS
T08859
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
tpac
Tenacibaculum pacificus
Pathway
tpac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PG913_11110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpac03021
]
PG913_11110
Transcription machinery [BR:
tpac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PG913_11110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-ProteinID:
WBX73383
LinkDB
All DBs
Position
2437503..2438366
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYAFLEQENERPPSPEEIAKKLDMTVNDVKESMKNSGRHV
SMDAPLIEGEDSNLYDVLNSGESPNPDRTLLHESLRIEINRALETLTPREADVVKLYFGL
GEHQPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILMTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattacgaaacaggttactaatagagaaaccgcttcattagataaa
tatttacaagaaataggaaaagtagatttaattactgctgatgaagaagtagaattagca
caaagaattaaagctggtgaccaaagagcattagaaaaattaactaaagctaacttacgt
ttcgttgtttcggtagcaaaacaatatcaaaatcaaggattaactttacccgatttaatt
aacgaaggtaacttaggtttaattaaagcggcaaaacgttttgatgaaactcgtggtttt
aaatttatctcatatgctgtatggtggattcgtcaatcaatattacaagcattagctgaa
caatctcgtattgtacgtttaccgttaaataaaattggttctatcaataaaattaacaaa
atgtacgcctttttagagcaagaaaacgaaagacctccaagtcctgaagaaattgccaaa
aagttagatatgactgtgaatgacgtaaaagaatcaatgaaaaattctggtcgtcacgta
tcaatggatgctcctttaattgaaggtgaagattctaatttatacgatgtattaaattca
ggtgaatcaccaaaccctgatagaactttattacacgaatctttacgtattgaaattaac
cgtgctttagaaacattaacgccacgtgaggctgatgttgtaaaattatacttcggatta
ggtgagcaccaaccaatgactttagaagaaattggtgaaactttcgatttaactcgtgag
cgtgttcgtcagattaaagaaaaagcaatccgcagattaaaacatacttctcgtagtaaa
attttaatgacttacttaggataa
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