Tenacibaculum pacificus: PG913_12295
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Entry
PG913_12295 CDS
T08859
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tpac
Tenacibaculum pacificus
Pathway
tpac03030
DNA replication
tpac03410
Base excision repair
tpac03420
Nucleotide excision repair
tpac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG913_12295 (polA)
03410 Base excision repair
PG913_12295 (polA)
03420 Nucleotide excision repair
PG913_12295 (polA)
03440 Homologous recombination
PG913_12295 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpac03032
]
PG913_12295 (polA)
03400 DNA repair and recombination proteins [BR:
tpac03400
]
PG913_12295 (polA)
Enzymes [BR:
tpac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG913_12295 (polA)
DNA replication proteins [BR:
tpac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PG913_12295 (polA)
DNA repair and recombination proteins [BR:
tpac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PG913_12295 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG913_12295 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
RNase_H_2
HHH
HHH_5
DUF1198
Motif
Other DBs
NCBI-ProteinID:
WBX73592
LinkDB
All DBs
Position
2679442..2682300
Genome browser
AA seq
952 aa
AA seq
DB search
MADQKRLFLLDAFALIFRGYYAFIKNPRINSKGMDVSAILGFTNSMLDVIKRERPDHLAV
CFDRGGSVARKDAFPEYKANRQETPEAIRIAIPYIEAMLEAMNIPVIVKTGYEADDIIGT
LAKKAEKEGYQTFMVTPDKDFAQLVSENIFMYRPRFGGGYETWGVAEVQEKFGVERPEQV
IDYLGMMGDSVDNIPGLPGVGEKTAKKFLAQYGSMENLLANTADLKGKMKEKIEANAELG
LLSKELATIMLDVPVDFHEEDFEMCQPNIQATADIFNELEFKRLSDTFVRIFKAAVPVKA
GEKTSEENTENKEETTAKAISATDSAGQFDLFAAPGTGTVSKEAVISGFKTIENTPHFYQ
HINSPIARKLLLSKLMQQTAVCFDTETTGLKALEVELIGISFSWEIGKGYYIYFPENQEE
TTAILEEFSPFFEASTIEKIGHNLKYDIKVLSNYKITVKGKLFDTMIAHYLINPDMRHGM
DILAETYLNYQPVPITELIGKKGKNQLSMRTVEIAKQTEYAVEDADITLQLKEHFTKELE
SGNVTKLFNEIETPLVSVLTAMEIEGINLNVPFLKELSVDLTSDIERLEKNIYEQAGEEF
NIGSPKQLGIVLFENMKLVEKPKKTKTGQYSTAEDVLSFLAKEHQIIRDIQEYRQYKKLK
STYVDALPNEVNTKTGRIHTSYAQAVAATGRLSSNNPNLQNIPIRTKRGQEIRKSFIPRN
ENYVLLAADYSQIELRIIASLSQEETMIEAFKNGEDIHASTASKVFNVPLEEVTREQRSN
AKTVNFGIVYGVSAFGLSNQTDLSRKEAKALIDTYYETYPKLKKYMAEQVDFARDNGYVE
TVLNRRRYLKDINSRNGIVRSAAERNAVNAPIQGSAADIIKLAMINIYNRLEKENFKSKM
LLQVHDELVFDAHKDELEIIKPIIKQEMENAFKMEVPLDVEIGIGENWLQAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaaaaacgactttttttactagatgctttcgcattaatttttagaggatat
tacgcttttattaaaaatccaagaattaactcgaaaggaatggatgtttccgctattttg
ggttttacaaactcgatgttagatgttataaaacgtgaacgtccagaccatttagctgta
tgttttgatcgtggtggttctgttgctagaaaagacgcttttcctgaatataaagcaaac
agacaagaaactcctgaagcaataagaattgcaattccatatatagaagcaatgttagaa
gctatgaatattcctgtaattgtaaaaacaggatatgaagctgatgatattattggaacg
cttgccaaaaaagcagaaaaagaaggctatcaaacttttatggtaacacctgataaggat
tttgcacaattggtttctgaaaatatttttatgtatcgccctcgttttggtggtggatat
gaaacttggggagttgccgaagttcaagaaaaatttggcgtagaacgtcctgaacaagtt
atcgattatttaggaatgatgggagattctgttgataatatccctggtttacctggtgtt
ggagaaaaaacagcaaaaaaatttttagcacaatatggttctatggaaaatctgttagca
aacacagcagatttaaaagggaaaatgaaagaaaaaatagaagcaaatgctgaattaggt
cttttatcaaaagaacttgctactattatgttggatgttcctgttgattttcatgaagaa
gattttgaaatgtgtcagcctaacattcaagcaactgccgatatttttaatgaattagaa
tttaaacgtttatcagatacttttgttagaatatttaaagctgctgttcctgtaaaagca
ggtgaaaaaacatccgaagaaaataccgaaaataaagaagaaacaacagctaaagcaatt
tctgctacagattcagctggacaatttgatttgtttgcagctccaggaactggaactgtt
agtaaagaagcagttatttcagggtttaaaactatcgaaaatacgcctcatttttatcaa
catataaattctccgatagcaagaaaattattattatcaaaattaatgcaacaaacggct
gtttgttttgatacagaaactacaggtttaaaagctttagaagttgaattaatcgggatt
tctttttcttgggaaataggaaaaggatattatatttatttccctgaaaatcaagaagaa
acaaccgctattttagaagaatttagtccgttttttgaagcatcaacaattgaaaaaatt
ggacataatttaaaatacgatatcaaagttttatcaaattataaaattactgttaaagga
aaattatttgataccatgattgcgcattatttaattaatcctgatatgcgtcatggaatg
gatattttagccgaaacatatttaaattatcagcctgttccaattactgaattaatcgga
aaaaaagggaaaaatcaactttctatgcgaactgttgaaattgccaaacaaaccgaatat
gccgttgaagatgcagatattaccttgcaattaaaagaacattttacaaaagagttagaa
agtggaaatgtaaccaagttatttaatgaaattgaaacacctttagtttcggttttaacg
gctatggaaattgaaggtatcaacttaaatgtgccatttttaaaagagctttctgttgat
ttaactagcgatattgaacgtttagaaaaaaacatttatgagcaagctggcgaagaattt
aatatcggttcaccaaaacaattaggaattgtattgtttgaaaatatgaaattggttgaa
aaaccgaaaaagactaaaacaggtcaatattctactgctgaagatgtgctttcgttttta
gcaaaagaacatcaaattattagagatattcaagaatatcgtcaatataaaaaactaaaa
agtacctatgttgatgccttgccaaatgaagtaaatacaaaaacaggacgtattcataca
tcttatgcacaggcagttgctgcaacaggaagattgagttcgaacaatccaaacttacaa
aatattccgattcgtacaaaaagaggtcaggaaattcgaaaatcttttatcccaagaaat
gaaaattatgtgttattggctgcggattattctcaaattgaattgagaataattgcttca
ttaagccaagaagaaaccatgattgaagcctttaaaaatggcgaagatattcatgcttct
acggcttcaaaagtatttaatgttcctttggaagaagtaactcgtgagcaacgtagcaat
gcaaaaacggtcaattttggtattgtttatggagtttctgccttcggattgagcaatcaa
acggatttatctcgtaaagaagcaaaagcattgattgatacctattacgagacgtatcct
aagttaaaaaaatatatggctgaacaagtagactttgcccgtgataacggttatgttgaa
accgttttaaacagacgtaggtatttaaaagatattaattctagaaacggaattgttcgt
agtgcagctgaaagaaatgctgtaaatgcaccgattcaaggaagtgcagccgatattata
aaactagcaatgattaatatttataatcgacttgagaaagaaaattttaaatcgaaaatg
ctattgcaagtacatgatgaattagtttttgacgctcataaagacgaattagaaattatc
aaaccaattattaaacaagaaatggaaaatgcctttaaaatggaagttccattagatgta
gaaataggaattggcgaaaattggttacaagcacattaa
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