KEGG   Thermococcus pacificus: A3L08_00950
Entry
A3L08_00950       CDS       T05192                                 
Name
(GenBank) RNA-binding protein
  KO
K22469  ribonuclease FAU-1 [EC:3.1.26.-]
Organism
tpaf  Thermococcus pacificus
Brite
KEGG Orthology (KO) [BR:tpaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpaf03009]
    A3L08_00950
Ribosome biogenesis [BR:tpaf03009]
 Prokaryotic type
  rRNA processing factors
   A3L08_00950
SSDB
Motif
Pfam: DUF402 RNase_E_G S1 Topo-V_HhH_2_2nd
Other DBs
NCBI-ProteinID: ASJ05998
UniProt: A0A218P5E7
LinkDB
Position
complement(157498..158913)
AA seq 471 aa
MSTDTGVTVRIRGIYSTALTKLFLDRGFGIAQPSNKIVERLGLEKTYDEFDVDIYDKKDH
HGVVLVGTKVEEVKEVLEEEFIDVFFRKLPYQLYGVYKGIVVQRDEKYVYVDIGSAIGTI
PVRDLPRAKEGDELLVQVKKHNLLPQLSVMITVPGDYAVLIPKPVGAQRHVKISRKIRDS
QERERLRILGLSIDLGEWGILWRTAAAYKDWNILRDEIIKLSKLSDRLAKANSYTAPSLI
IEGRNIYEVEFGGGAKRKLDEIRNKAVPTVEGHHQLKAYDLEFSFAVEIAEGILAKVPGQ
RAKVNQGFWEALIENKGPRKGWLFRLEHHKPDGQLIKIGPGEIQEVSTNPLKVTFRRHLK
PGKFYDGLDIPIEFGDYVITEIEAGKWWFVHRYYDKNGNLKGEYYNINTPVEIYPDRARY
IDLEVDIVKWPDGKKEIIDKEKLTEHYEEGTISEKLYRAVLRIVQEVYDRI
NT seq 1416 nt   +upstreamnt  +downstreamnt
gtgtctacagacacaggagttacagtccggattaggggcatatacagcacggccctgacg
aagcttttcctcgacaggggcttcggcattgcgcagccgagcaacaagatcgtcgagagg
ctcggactggagaagacctacgacgagttcgacgttgacatctacgacaagaaggaccac
cacggtgtggtcctcgttggaacaaaggttgaggaagttaaggaagttctcgaggaggag
ttcatcgacgtcttcttccggaagcttccctatcagctctacggggtatacaagggcatc
gtcgtccagagggacgagaagtacgtttatgttgacatcgggagtgctataggtactata
cccgtaagggacctcccgcgcgcgaaggagggggatgaactgctcgtccaggtcaagaag
cacaacctcctgccccagctcagcgtcatgatcaccgtcccaggagattacgccgtcctg
attccgaagcctgtcggtgctcagaggcacgtgaagatatcgcgcaaaataagggacagc
caggagcgcgagaggctcaggatactcggcctcagcatagacctcggcgagtggggcatc
ctctggagaaccgctgcagcttacaaggactggaacatcctgagggacgagataataaag
ctatcgaagctctccgacaggctcgccaaagcgaactcttacacggccccatcactcata
atcgagggccggaacatatacgaggtcgagtttggagggggcgcgaagaggaagctcgac
gagataaggaacaaagccgttccgaccgtcgagggccaccaccagctcaaggcctatgac
cttgagttcagctttgccgtcgagatagccgagggcatactggccaaggtgccgggtcag
agggccaaggtcaaccagggcttctgggaagcgctgatagagaataaaggaccgaggaag
ggctggctcttcaggctggagcaccacaagccggacgggcagctcataaagataggcccc
ggcgagatccaggaggtctcgacgaacccgctgaaggtcaccttcaggcgccacctcaag
ccaggcaagttctacgacggcctcgacatcccgatagagtttggggactacgtcatcacg
gagattgaggcaggaaagtggtggttcgtgcaccgctactacgacaagaacggcaacctc
aagggcgagtactacaacatcaacacgccggtcgagatatacccggacagggccagatac
atagacctcgaagtggacatcgtgaagtggccggacggtaagaaagagataatcgacaag
gagaagctcaccgagcactatgaggagggaacgataagcgagaagctctacagggccgtc
ctgagaatagtgcaggaggtctacgatagaatttga

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