KEGG   Thermococcus pacificus: A3L08_00975
Entry
A3L08_00975       CDS       T05192                                 
Name
(GenBank) replication protein C
  KO
K04800  replication factor C large subunit
Organism
tpaf  Thermococcus pacificus
Pathway
tpaf03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tpaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3L08_00975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpaf03032]
    A3L08_00975
DNA replication proteins [BR:tpaf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     A3L08_00975
SSDB
Motif
Pfam: AAA Rad17 AAA_14 RCF1-5-like_lid AAA_22 nSTAND3 AAA_5 RuvB_N AAA_11 DUF815 AAA_16 AAA_30 AAA_33 AAA_17 Zeta_toxin AAA_28 AAA_6 AAA_25 ResIII AAA_19 AAA_18 PPV_E1_C AAA_assoc_2 AAA_24 ABC_tran NPHP3_N TsaE DNAX_ATPase_lid T2SSE Gp44_lid Viral_helicase1 RNA_helicase AAA_7 Hydin_ADK
Other DBs
NCBI-ProteinID: ASJ06003
UniProt: A0A218P5E0
LinkDB
Position
complement(162633..164150)
AA seq 505 aa
MPREAPWVEKYRPRKLSEIVNQEKAIEQVRAWVEAWLHGNPPKKKALILAGPPGSGKTTT
VYALAHEYGFEVIELNASDERTYEKIERYVQAAYTMDILGKHRKLIFLDEADNIEPSGAK
EIAKLIDKARNPIIMAANHYWEVPKEIRAKAQIVEYKRLTQRDIIKALIRILKREGITVP
KEVLYDIAKHANGDLRAAVNDLQTVVTGGVEDAHEVLAYRDTEKSVFQALAQVFATDNAK
KAKIAILGVDMFPHELLQWIDENVPYVYYRPEDIARAYEAISRADIYLGRAQRTGAYSLW
KYATDMMTAGVAVAGVKKKGFVRIYPPKTIKLLTESKTERTLRDSVVKKIMKEMHMAKLE
ALETLNYLKAIFENNPDMAAHFVVYLDLDLKEVEFIAGDKEKAKTIWAKSMNIEKKLKRE
GELEARAREAGKELEEAKEAAEEEEAEKAEGETEEAGEETEEEINEEELEKAEEEIEPVR
KEESEKIDRPKKKGKQATLFDFLKR
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgccgagggaagccccctgggtcgagaagtatcgcccgagaaagctcagcgaaatagtc
aatcaggaaaaggcaatagaacaggttagggcatgggtcgaggcatggcttcacggcaac
cctccaaagaagaaagctttgatcctcgccggtccgcccgggagcgggaagacaaccaca
gtctacgctctcgctcatgaatatggcttcgaagtaatcgagctgaacgcgagcgacgag
agaacctatgagaagatagagcgctacgttcaagcggcctacacgatggacatcctcgga
aagcacaggaagctcatcttcctcgacgaggccgacaacatagagccgagtggggctaaa
gagatagccaagctcatcgacaaagccagaaatcccataataatggccgccaaccactac
tgggaggtcccgaaggagataagggccaaagctcagatagtggaatacaagcgcctcact
cagagggacataatcaaggcactgataaggattctcaagcgcgagggaattaccgtcccc
aaggaggttctctacgacattgcgaagcacgccaacggcgacctgagagctgcagtaaac
gacctccagaccgtcgtgaccggaggagtggaagacgcccacgaggtcttggcttaccgc
gacacggagaagagcgtctttcaggcgctggcgcaggtcttcgccaccgacaacgccaaa
aaggcgaagatagcaattctcggtgtcgacatgtttccccacgagcttcttcagtggata
gacgagaacgtcccctacgtctattaccggccggaagacatagcgcgcgcttatgaagcg
ataagcagggcagatatatacctcgggagggcgcagaggaccggagcgtattccctctgg
aagtacgcgaccgacatgatgacggcaggcgttgccgttgccggcgtcaagaagaagggc
ttcgtcaggatctacccgccgaagacgataaagctcctcaccgagagcaagaccgagcgg
actttgagggactcggtggtcaagaagataatgaaagagatgcacatggccaagctcgaa
gcgctggagaccctcaactacctcaaagccatctttgagaacaatcccgacatggcagcc
cacttcgtcgtctaccttgacctcgatctgaaggaagtcgagttcatagccggtgacaag
gagaaggccaagacgatatgggccaagagcatgaacatcgagaagaagctcaagagggag
ggcgagcttgaggccagggccagggaagccgggaaagaactcgaagaggccaaggaggcc
gcggaggaagaagaggcagagaaagccgaaggggagaccgaagaagccggggaagagacc
gaggaagaaataaacgaggaggagcttgagaaggcggaagaggaaatagagccggtcaga
aaggaagagtcagagaagatagacaggccaaagaagaagggcaagcaggcgacgctgttt
gactttttgaagaggtga

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