Thermococcus pacificus: A3L08_01355
Help
Entry
A3L08_01355 CDS
T05192
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tpaf
Thermococcus pacificus
Pathway
tpaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L08_01355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpaf03021
]
A3L08_01355
Transcription machinery [BR:
tpaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
A3L08_01355
Prokaryotic type
Archaeal type
TFE
A3L08_01355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7342
TrmB
GntR
Sigma70_r3
HTH_5
Phage_rep_org_N
Prefoldin_2
HTH_Crp_2
Rrf2
Zn_Ribbon_TF
HTH_9
PLC-beta_C
Cas12f1-like_TNB
HTH_Cmi2_C
POLR3C_WHD
Zn_ribbon_RlmA
HTH_IclR
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
ASJ06072
UniProt:
A0A218P5L5
LinkDB
All DBs
Position
complement(230526..231071)
Genome browser
AA seq
181 aa
AA seq
DB search
MGRRKNKELLELAMDMGGEEAVEVIKALEKKKEATDEELAEMTEIRVNTVRKVLYMLYDQ
GLAEFKRIRDKETGWYYYYWRLETKRLPEILRAKKMAELKRLKEMLEEETSEIYYHCGTP
GHPKLTFDEAMEYEFQCPICGQMLMQYDNTAIVEELKKRIEELEIELGLRKKPKARKSES
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgggaaggcgcaagaacaaggaactcctcgaactcgcaatggacatgggcggagaagag
gccgttgaggtaatcaaggctcttgagaagaagaaggaagccaccgacgaggaacttgcc
gagatgacagagataagggtcaacaccgtcaggaaggttctctacatgctctacgaccag
gggctggcggagttcaagcgcatcagggacaaggagacgggctggtattactactactgg
cgcctcgagacgaagcgcctcccagagatactccgcgctaagaagatggcagagctgaag
aggctcaaggagatgctcgaggaggagaccagcgagatctactaccactgcgggacgccg
gggcacccgaagctgacctttgacgaggcgatggaatacgagttccagtgcccgatatgc
ggccagatgctcatgcagtacgacaacaccgcgattgttgaggagctgaagaagcgcatc
gaggagctcgagatagaactcggcctcaggaagaagcccaaagctagaaagagcgagtcg
aactga
DBGET
integrated database retrieval system
