Thermococcus pacificus: A3L08_01485
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Entry
A3L08_01485 CDS
T05192
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
tpaf
Thermococcus pacificus
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpaf03016
]
A3L08_01485
Enzymes [BR:
tpaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
A3L08_01485
Transfer RNA biogenesis [BR:
tpaf03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
A3L08_01485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
PabTrmU54_TRAM_dom
MTS
Methyltransf_31
Methyltransf_25
Cons_hypoth95
PrmA
Methyltransf_23
Methyltransf_15
TehB
PCMT
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ASJ06094
UniProt:
A0A218P5M6
LinkDB
All DBs
Position
complement(252936..254189)
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AA seq
417 aa
AA seq
DB search
MRGIVERLDFDGMGIVKVRKKEIHVPFTVPGDVVEVKKWRRKKRRLVAVDFDVVEPSPER
TEPRCPYFGTCGGCLLQHLPYEKQVEFKAEKLSALLSMDVEVVPSPVIYGHRNRIDVVIS
TKGIGFRRRGTWWDAVDIEECPVFGKTSRKVLRSLREFIGDHNPSLYEIGKNEGFLRYIV
IREGKFTGELMVNLVTSEGALPEEFPGYFDYADSIYWSVNRTQSDVSYGEIERFWKSEFI
RERLDDVTYLIHPNSFFQTNSYQAVTLVREVSRLVDGERVLDLYSGVGTFGIYLARRGFD
VEGIEVNPFAVEMARRNVELNGVEAVFRVGEDRDVEDLSSYDTVVLDPPRAGLHPKLIRK
ILKDGPQSIVYVSCNPKTLVENLKVLYERYSVEDATGIDMFPHTPHVEAVVKLKLKV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcggggaatcgtcgagagactggacttcgatggtatgggcatcgtaaaagtcagaaaa
aaggaaattcacgttccgtttacggtcccaggagacgtcgttgaggttaagaagtggaga
cggaagaagaggaggctagtagctgtagattttgatgtggtggagccctcgccggagcga
accgagcccaggtgcccatactttggcacctgcggcggctgcctcctccaacacttgccc
tacgagaaacaggttgagttcaaagcggagaaactctcggccctccttagtatggacgtc
gaggtagtgccctcccccgtgatttatgggcatagaaacaggatagatgttgtcatttcg
actaagggcattggcttcaggaggaggggcacctggtgggatgccgttgacatcgaggag
tgcccggtttttggaaagaccagcaggaaagtcctgcgctcgctgagggagtttataggg
gatcacaacccgagcctctacgagatagggaagaacgagggctttttgaggtacatcgtc
atccgcgagggcaagttcacaggggagctcatggttaacctcgttacttcggagggggca
cttcctgaggagttccctgggtactttgactacgccgattcaatatactggagcgtcaac
agaacccagagcgacgtctcctacggcgagatagagcgcttttggaaatcggagttcata
cgggaaaggctcgacgacgttacgtacctcatccaccccaacagcttcttccagacaaac
agctaccaggcggtgacccttgtaagggaggtttccaggcttgtggatggcgagagggtt
cttgatctctactccggcgttggcaccttcgggatatatctggccagacgcggtttcgat
gtggaaggaatagaggtcaacccgttcgcggtcgagatggcgcgtaggaacgtcgaactc
aacggcgtggaagcggtcttcagggtcggggaggacagggacgttgaggacctctccagc
tacgacaccgtggtccttgacccgccaagagcagggctccatcccaaactgatccggaaa
atcttaaaagatggaccacagagcatcgtttacgtctcctgcaacccgaagaccctcgtc
gagaacctgaaggttctttacgagaggtactccgttgaggacgccaccggaatcgacatg
tttccccacacgccgcacgtggaggcggttgtcaaactgaaactcaaagtttaa
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