Thermococcus pacificus: A3L08_03375
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Entry
A3L08_03375 CDS
T05192
Name
(GenBank) transcription elongation factor Spt4
KO
K15171
transcription elongation factor SPT4
Organism
tpaf
Thermococcus pacificus
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
A3L08_03375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpaf03021
]
A3L08_03375
03019 Messenger RNA biogenesis [BR:
tpaf03019
]
A3L08_03375
Transcription machinery [BR:
tpaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
A3L08_03375
RNA polymerase I system
A3L08_03375
Messenger RNA biogenesis [BR:
tpaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
A3L08_03375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
RecR_ZnF
DZR
PHF5
Rad50_zn_hook
Zn_ribbon_RRN7
Nop10p
NRDD
HypA
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-ProteinID:
ASJ07635
UniProt:
A0A218PA22
LinkDB
All DBs
Position
complement(618738..618923)
Genome browser
AA seq
61 aa
AA seq
DB search
MKERACRHCHYITTEDRCPVCGSRDLSDEWFDLVIITDPEKSRIAEKLGVKVPGKYAIRV
R
NT seq
186 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggagcgcgcctgcaggcactgccactacataaccacagaggaccgctgtcccgtc
tgcggtagcagagacctcagcgatgagtggttcgacctcgtcataatcaccgacccagag
aagagcaggatagccgagaagctgggggttaaggtccccggcaaatacgccataagggtc
agatga
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