Thermococcus pacificus: A3L08_04755
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Entry
A3L08_04755 CDS
T05192
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpaf
Thermococcus pacificus
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpaf03032
]
A3L08_04755
03400 DNA repair and recombination proteins [BR:
tpaf03400
]
A3L08_04755
Enzymes [BR:
tpaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A3L08_04755
DNA replication proteins [BR:
tpaf03032
]
Prokaryotic type
DNA Topoisomerases
A3L08_04755
DNA repair and recombination proteins [BR:
tpaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3L08_04755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
DUF4364
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
ASJ06679
UniProt:
A0A218P7B9
LinkDB
All DBs
Position
complement(844715..846901)
Genome browser
AA seq
728 aa
AA seq
DB search
MVTLIIAEKPNVARKIAYALAEGKPVRKTIGKVSYYEFTRDGKRVIVAPAVGHLFSLAPK
VKTYGYPIFDIEWVPVYVAEKGKSYAKDYIKALATLAKQADEFVVACDYDTEGEVIGYTA
LKYACGVDPSKAKRMKFSALTKKDLLKAWYNLEPTINFGMADAGVARHVLDWYWGVNLSR
ALTSAIKRASGKWMVLSTGRVQGPTLKFLVDREKEIQNFKPTPYWVIKMLLEKNGEQYTA
TYEKERILDEEEAKRIVEEAKKGPAFVEKVEVKQQNRNPPAPFDLGTLQREAYSAFGYSP
KKTLEIAQKLYEKSLTSYPRTSSQKLPKNLNFRAILQNLAKLPEYKPFAHALLGKENLKP
VEGKKDDPAHPAIYPTGELPKPGDLTKDEQNIYDLVVRRFLALFMEPAVRETMKVIINSN
NHRFILSGARTVKEGWLKVYGKYVKFDEVILPAFKEGEPVKVLQIKREKKKTKPPARYSP
AAVIKKMEDLGIGTKATRAQILETLYSRGYIEGKRKIKVTPLGMRVVEALEKNVPDIVSV
ELTRAFEEKMEDIMAGKAEKEQVIEESKNQLVKILKVFKEKEMDIGKMLLESTGTGVTPS
KSSARKGGAVKELSEEEEREVQRAVDGKASSENAESKKPAKKALVIGKCPKCGGDLVVRY
NRKTGKRFVGCSNWPKCDVTYPLLQRGEIIPTDKTCCNGAPVVKIREGKKEYEICIDMNC
RDWKKGKK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggtcacactcatcatcgcggagaagcccaacgttgccagaaagatcgcctacgcccta
gcagaaggaaaacccgtgaggaaaacgataggaaaggtctcctactacgagttcacccgc
gatgggaagcgggtcatcgtcgcccctgcggttggtcatctcttctcccttgcccccaaa
gttaagacctacggctacccaatcttcgacatcgaatgggtgcccgtttacgtcgccgag
aaggggaagagctatgccaaggactacatcaaggcccttgcgacacttgcgaagcaggct
gatgaattcgtcgttgcctgtgactatgataccgagggagaggtcataggctacacagcc
ctcaaatacgcctgcggcgttgacccctcgaaggcaaagcgcatgaagttctccgctttg
acgaagaaagacctcctcaaagcatggtacaacctcgaaccgacgataaactttgggatg
gccgacgccggcgttgcgaggcacgtcctcgactggtactggggcgtcaacctttctcgt
gctctcacctcggccataaagcgcgcgagcggcaagtggatggttctctcaactggaagg
gttcagggccccaccctcaagttcctcgtggacagagagaaggagattcagaacttcaag
ccgaccccttactgggtcatcaagatgctcctcgagaagaacggcgagcagtacaccgca
acctacgagaaggagcgcatccttgacgaggaggaggcgaagcgcatcgtcgaggaggcg
aagaaagggcctgcattcgttgaaaaggtcgaggtaaagcagcagaacaggaacccaccg
gctccattcgacctcggaaccctccagagggaggcatactcagcgttcggatacagcccg
aagaagactttagagattgcacagaagctgtatgaaaaatctctcacgagctatccgcgc
accagctcacagaagctccccaagaacctcaacttccgcgccatacttcagaacctggca
aagcttcccgagtacaagcccttcgcccacgccctccttggaaaggagaatctcaagccc
gttgagggcaagaaggacgaccctgctcatccggccatctaccccacaggcgaacttccc
aagcccggcgacctcaccaaggatgagcagaacatctatgacctcgttgtcaggcgcttt
ttggccctcttcatggagccagctgtcagagagacgatgaaagtcatcataaactccaac
aaccaccgcttcatcctgagcggcgcgagaacggtcaaagagggctggctgaaggtctac
ggcaaatacgtcaagttcgacgaggttatcctcccggccttcaaggagggtgaacccgta
aaggttctccagataaagcgcgaaaagaagaagacgaagcctccagcccgctactctccg
gcggcagtgataaagaagatggaggatttgggtatcggaaccaaggccacgcgtgcccag
atactcgagacgctctacagcaggggctacatcgagggcaagaggaagataaaggtgacc
ccgctcggaatgcgcgtcgttgaggcccttgagaagaatgttccagatatagtcagcgtc
gagctaaccagggccttcgaggagaagatggaggatataatggccggaaaagctgaaaaa
gagcaggtcattgaggagagcaagaaccagctggttaaaatccttaaggtcttcaaggag
aaggagatggacatcgggaagatgctccttgagagcaccggaactggtgttactccgtcc
aaatcttcggcgaggaaggggggcgcggttaaagagctgagtgaggaagaagagcgcgag
gttcagagggccgttgatgggaaagccagttctgagaacgcggagagcaaaaagcccgcg
aaaaaggcgctcgtcatcggcaagtgtcccaagtgcggcggcgacctggtagttcgctac
aaccggaaaacggggaagcgcttcgtcggctgctcgaactggcccaagtgcgacgtaact
tatcccctcctccagcgcggcgaaataatccctaccgataagacctgctgcaacggtgcc
cccgtcgtcaaaatccgcgagggaaagaaggagtacgagatatgcatcgacatgaactgc
agggactggaagaagggaaagaaatga
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