Thermococcus pacificus: A3L08_05040
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Entry
A3L08_05040 CDS
T05192
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tpaf
Thermococcus pacificus
Pathway
tpaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A3L08_05040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpaf03021
]
A3L08_05040
Enzymes [BR:
tpaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A3L08_05040
Transcription machinery [BR:
tpaf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
A3L08_05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
ASJ06724
UniProt:
A0A218P7G9
LinkDB
All DBs
Position
901708..904425
Genome browser
AA seq
905 aa
AA seq
DB search
MQSMKKVIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGVVDPGLRC
ETCGARAGDCPGHFGHVELARPIIHVGFAKTIHRVLESTCRECGRIKLKDEEIEEYMHKF
DVVGDRKKAKDRLIKEIHKKAKERMVCPHCGAPQFPIKFERPTIYWELRKDEEGNEYKHR
MMPSEVRDRLEKIPDKDLPLLGLHPEKARPEWMVLTVLPVPPVTMRPSITLESGIRAEDD
LTHKLVDIIRINNRLKSNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGIPPAKHKSGRP
LKTLSQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPLAVAMELTVPEKVT
EFNFEKLKQRVLNGPEKYPGANYVIDPEGRRIRLMENNLEIIAEKLDIGWTVERHLEDGD
IVLFNRQPSLHRMSIMAHRVRVMPYRTFRLNLAVCPPYNADFDGDEMNLHVPQTEEAQAE
AKILMEVQNHIISPRYGGPLIAGIQDHISGGYLLTREGAYFTRSEVEQMLMFAGVDVKEL
PEPDKVENGVELWSGKTIFSLLLPDDLTIWYRNKLCDEPERCEAIEKLIEEKLIPDPEEV
RKIAYDGFVYIQNGKLLSGAIDKKAYGREDGKLLDIIVREYGVERARQFLDQVTKLAIWA
ITHKGFTTAIDDEDLPQEALDRIHEIIREAEDRVNRLIEAYKNGELEPLPGKTLEETLES
NIMAVLAEARDNAGKVAEKYLGMTNHAVIMAKTGARGKMLNITQMAAMLGQQSIRGKRLY
RGYRDRVLTHFKPGDLGAKARGFVTNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPMGIIVQFKYGEDGIDPMKSWQGKTIDVDRVIVRTLVK
MRGGE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgatgaagaaggtcatcgggagtattgagttcggaatcctctcaccgcaggaa
atcagaaagatgagcgcggctgagataaccgtcccggacacctacgacgatgacggttat
cccatcgaaggcggccttatggacaagcgcctcggtgtcgtcgacccgggactccgctgt
gagacctgtggcgccagggccggggactgtcccggccacttcggccacgtcgagcttgca
aggccgataatccacgtcggattcgccaagaccatccaccgggttttggagagcacctgc
cgtgagtgtggcaggataaagctgaaggacgaggaaatagaggagtacatgcacaagttc
gatgtcgtgggcgacaggaagaaggcaaaggacaggctcatcaaggagatacacaagaag
gccaaagagaggatggtctgcccgcactgtggagcgccgcagttcccaataaagtttgag
agaccgaccatctactgggagctcaggaaggacgaagagggcaacgagtacaagcacagg
atgatgccgagcgaggtccgcgacaggctcgagaagatacccgacaaggacttaccgctc
ctcggcctgcacccggagaaggccaggcctgagtggatggttctcaccgtcctcccggtt
ccgccagtcaccatgaggccctccatcaccctcgagagcggcatcagagcggaggacgac
ctcacccacaagctcgtcgacataatccgtatcaacaaccgcctcaagtccaacatcgag
gcaggagcacctcagctgattatagaggacctctgggacctcctccagtaccacgtcacc
acatacatcaacaacgagacctcaggcattccgccggccaagcacaagagcggaaggccc
ctcaagaccctctcccagaggcttaagggtaaggagggacgcttccgtggcaacctcagc
ggtaagcgtgttaacttctccgcccgtaccgttatcagcccagacccgatgataagcatc
aatgaggtcggcgttcccctcgcggttgccatggagctcaccgttccggaaaaggtcacc
gagttcaacttcgagaagctcaagcagagggttttgaacggtcccgagaagtatcctgga
gccaactatgtaatcgaccccgagggaagaaggatacgcctcatggagaacaaccttgag
ataatcgcggaaaagctcgacatcggctggaccgtcgagaggcaccttgaggacggggac
atagtcctgttcaacaggcagccgtcgcttcacaggatgtccatcatggcccaccgcgtc
cgcgtcatgccctacagaaccttccgcctcaacttggctgtctgcccgccctacaacgcg
gacttcgatggtgacgagatgaacctccacgtgcctcagactgaggaggcgcaggcggaa
gcgaagatacttatggaagttcagaaccacataatctcaccgcgttacggcggtccgctt
atagcgggaatacaggatcacatctccggtggctacctgctcacacgcgagggagcgtac
ttcacccgcagcgaagtggagcagatgctcatgttcgcgggcgtagatgtgaaggagctc
cctgaaccggacaaggttgagaatggcgttgagctctggagtggaaagactatattctca
ctcctcctgccggacgacctgaccatctggtaccgcaacaaactctgcgacgagccggag
cgttgcgaggccatagagaagctcatagaggagaagcttatcccggaccctgaggaggtc
aggaagatagcctacgacggcttcgtctacatccagaacggaaagctcctcagcggtgcc
atagacaagaaggcctacggtagagaggacggaaagctccttgacatcatcgtaagggag
tacggcgttgagagggccaggcagttcctcgaccaggtcacgaagctcgccatatgggct
atcacccacaagggcttcacaacagcaatagacgacgaagacctcccgcaggaggccctc
gacaggatacacgagataatccgcgaggcggaggatagggtcaacaggctcatagaggcg
tacaagaacggtgagctcgagccgcttccgggtaagaccctcgaggagacacttgagagc
aacatcatggcggttttggcagaggcccgtgacaacgcgggtaaggtcgctgaaaagtac
ctcggtatgaccaaccacgcggtcatcatggccaagaccggagcgaggggtaagatgctc
aacatcacccagatggctgcgatgctcggacagcagtccatccgtggtaagcgtctctac
cgcggctatcgcgacagggttctaacccacttcaagcccggcgaccttggagccaaggcc
aggggcttcgtcacgaactcctacaagagtggcttaaccccacaggagtacttcttccat
gcaatgggtggaagggaaggtctcgttgacaccgcggtcaggacggcacagagcggttac
atgcagaggagattgataaacgccctccaggacctcaaggttgactacgacggaacggtg
agggatccgatgggaatcatcgtccagttcaagtacggtgaggacggaatagacccgatg
aagagctggcagggcaagacgattgacgttgatagggtcatcgttagaaccctcgtgaag
atgaggggaggtgagtga
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