Thermococcus pacificus: A3L08_05045
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Entry
A3L08_05045 CDS
T05192
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
tpaf
Thermococcus pacificus
Pathway
tpaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A3L08_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpaf03021
]
A3L08_05045
Enzymes [BR:
tpaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A3L08_05045
Transcription machinery [BR:
tpaf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
A3L08_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
SMC_ScpA
Motif
Other DBs
NCBI-ProteinID:
ASJ06725
UniProt:
A0A218P7G2
LinkDB
All DBs
Position
904427..905602
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AA seq
391 aa
AA seq
DB search
MVAAKTIRSLVDKAELPENIKEELYNKLVEYDKKYKLKKAEIEAIIQEAVREYEKAKIEP
GEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPIMTVYL
DEKHRYDREKALEVARRIEGTTLENLARETSIDILNYEFIVEIDPERLQKAGLDMEKIQR
KLEGSFKTAEFEVDGYTLIMRPKKVGKLSDLRKLSEKVKKHRLKGLSGVGKTIIRKEGDE
YVIYTEGSNFKQVLKVPGVDPTRTRTNNIWEIAEVLGIEAARNAIIEEIVNTMREQGLEV
DVRHIMLVADMMTLDGVILPIGRHGIVGEKASVLSRASFEITTQHLFEAAERGDVDPLNG
VVENVLIGQPVPVGTGMVKLAMNLPLRPKRE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagcgaagaccatcaggagccttgttgataaggcagagcttccggagaacatc
aaggaagagctctacaacaagctcgtcgagtacgacaagaagtacaagctcaagaaggcg
gagatcgaggccatcatccaggaggccgtcagggagtacgaaaaggccaagatagagccg
ggagaagccattggaaccgttgcggcgcagtcaatcggtgagccgtcaacgcagatgacc
ctcaacaccttccactacgctggtgtcgctgagatcaacgtcaccctcggtctgccgaga
atcatcgagattgtggacgcgagaaagaacccatcaacgcctatcatgaccgtttacctc
gacgagaagcaccgctacgacagggagaaagcccttgaagtggcgaggaggatagaggga
accaccctcgagaacctcgcaagggagaccagcattgacatcctcaactacgagttcata
gtggagatcgacccggagaggcttcagaaagccggcctcgacatggagaagattcagagg
aagcttgagggctcgttcaagaccgcagagtttgaggtggacggatacacgctcattatg
aggcccaagaaggtaggcaagctctccgacctgaggaagctctccgaaaaggttaaaaag
caccgtcttaaaggcctctcgggcgtcggaaagaccatcatccggaaggaaggcgacgag
tacgtcatctacacagagggctcgaacttcaagcaggtgctcaaggtcccgggcgttgat
ccaacgagaaccaggaccaacaacatctgggagatcgccgaagtgctcggcattgaagcg
gcaaggaacgccatcatagaggaaatcgtcaacacgatgcgcgagcagggtctcgaggtc
gatgtcagacacatcatgctcgtcgccgacatgatgacgctcgacggagttatactgccc
ataggcaggcacggtatagttggggagaaggccagcgtgctttccagggcatctttcgag
ataaccacacagcacctcttcgaggccgctgagaggggtgacgttgacccgctcaacggc
gtcgttgagaacgtgctcataggccagcccgtgcctgtcggtacgggaatggtcaaactg
gcaatgaatctccccctgagaccgaaaagggagtag
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