Thermococcus pacificus: A3L08_06295
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Entry
A3L08_06295 CDS
T05192
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
tpaf
Thermococcus pacificus
Pathway
tpaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A3L08_06295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpaf03019
]
A3L08_06295
03012 Translation factors [BR:
tpaf03012
]
A3L08_06295
Messenger RNA biogenesis [BR:
tpaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
A3L08_06295
Translation factors [BR:
tpaf03012
]
Eukaryotic type
Release factors
A3L08_06295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
TssR_VWA
zf-RRPl_C4
Zn_ribbon_8
zinc_ribbon_6
Wtap
PhosphMutase
Motif
Other DBs
NCBI-ProteinID:
ASJ06960
UniProt:
A0A218P8A0
LinkDB
All DBs
Position
complement(1122303..1123550)
Genome browser
AA seq
415 aa
AA seq
DB search
MSHKSAEMYELKKKVEELKSYRGRATELVSLYIPAGYDINKVMQQLREEYGTAQNIKSKS
TRKNVLGALERAMQHLKLYRQTPENGLALFVGNVSEQEGVSDIKLWAIVPPEPLKVRLYR
CDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVIDELTSNVPGKTRAGGQS
ARRYERIREQETHEFMKRIAEHANNAFLPLLEKGELRGIIIGGPGPTKEEFIEKDYLHHE
LRKKIIGVVDISYSGEYGLKELVEKASDILKDHEAIKERHLIQNFFRHLVKDTGMITYGE
REVRKALELGAVDTLLISEGYDRVRVHAKCNNCGWEEEKTMSEQEFHVYKKKLTHCPKCG
SQNLSFEKWDVAEELIKMAEEAGSNVEVISLDTEEGQQFYKAFGGIGAFLRYKIR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctcataaatccgctgagatgtacgaactcaagaagaaagtggaggagctcaaaagc
tatcgaggtcgagcaaccgagctggtcagcctttacattcctgcgggctatgacataaat
aaggtcatgcagcagcttagagaagagtacggcaccgcccagaacataaagagcaagtca
acccgaaagaacgtcctgggcgccctggaaagggcaatgcagcacctcaagctctacagg
cagaccccggagaacggtctggcgctcttcgttggaaacgtcagcgagcaggagggagtg
agcgacataaagctctgggcaatagtcccgcccgagcccctcaaggtccgcctctaccga
tgcgaccagaccttcgtcacggagccccttgaggaaatgctccgcgttaaagatgcttat
ggcctcataaccgttgagaagaacgaggccaccattggtctgctccgcgggaagaggata
gaggtaatcgacgagctcacctctaacgtccccggaaagacgagggcgggtggtcagtcg
gccaggcgttacgagaggattagggagcaggagacccacgagttcatgaagcgcatagcg
gagcacgctaacaacgcctttctcccgctccttgagaagggcgagctcaggggcatcatt
ataggcggccctggccccacaaaggaggagttcattgagaaggactacctccaccacgaa
ctcagaaagaaaatcatcggcgtcgttgacataagctacagcggcgagtacggcctcaag
gagctcgtcgagaaggccagcgacatcctcaaagaccacgaggccatcaaggagcgccac
ctcattcagaacttcttcagacacctcgtcaaggacacgggaatgataacctacggtgag
agggaagtcagaaaggcccttgagcttggggcggtagacacgctcctcatcagtgagggc
tacgaccgcgtcagggttcacgcgaagtgcaacaactgcggctgggaagaggagaagacc
atgagcgagcaagagttccatgtttacaagaagaagctcacccactgcccaaagtgcgga
agccagaacctcagcttcgagaagtgggacgtggcggaagagctcataaaaatggccgag
gaagcgggctcaaacgttgaagtcatatccctcgatactgaggagggccagcagttctac
aaggccttcggcggaattggtgccttcctgaggtataagataaggtga
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