KEGG   Thermococcus pacificus: A3L08_07020
Entry
A3L08_07020       CDS       T05192                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tpaf  Thermococcus pacificus
Brite
KEGG Orthology (KO) [BR:tpaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpaf03400]
    A3L08_07020
Enzymes [BR:tpaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A3L08_07020
    5.6.2.6  RNA 3'-5' helicase
     A3L08_07020
DNA repair and recombination proteins [BR:tpaf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    A3L08_07020
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DUF1424
Other DBs
NCBI-ProteinID: ASJ07669
UniProt: A0A218PA56
LinkDB
Position
complement(1260524..1263124)
AA seq 866 aa
MSAEGIRRAEREYTDEEIFGILSEPVREWFKRKFGTFTPPQRYAVLEIHKGENVLISSPT
GSGKTLSAFLAAINELILLGKEGKLEDRIYVLYVSPLRALNNDIKRNLEGPLMEIQEVAK
ELGYELPGIRVGIRTSDTSSYQKSKMVKKPPHILITTPESLAIALNAPKFRERLKTIRYL
IIDEVHALAENKRGTHLALSVERLAEMAEEKFVRIGLSATIHPLEEVAKFVFGFDDEGKP
RPGLIVDVSFAKETEIRVESVVDDLIYTDAGTLSEALYKRLAELIREHRTTLIFTNTRSG
AERVAFNLKKRYPEFEGLIEAHHSSLSREVRLDVEERLKRGELKAVVTSTSLELGIDIGT
IDLVVLIGSPKSVNRALQRIGRAGHRLHDVSKGIILALDRDDLVEVTVLAHNARNRRLDR
VRIPKNPLDVLVQHLLGMALNKVWEVEEAYRVVRRAYPYRDLPFEDFMSVLHYLAGEYAG
LEERKVYAKIWLEDGRFGRRGKMTRAIYYMNVGTIPDEAKIRVYTMDKQMIGTVEEEFAE
RLMPGDIFVLAGRTYEFVKSRGNKIYVIPRQGAKPTIPAWFSEMLPLSFDLALDIQRFRR
EVSELVNNRRAKDFLMRKYGIDERAARAILAYFREQARYSTVPDDETVLVEVVRGENRNE
YFFHTLVGRRANDALSRAFAYLVSQWKRCNVGVAINDNGFALILPPEAELTEDEIRGLFQ
VEDLRETLKRALDNTELLKRRFRHVANRGLLILRRYIGRSKRLGRQQVMAVALLKVLKEN
HPDFPLLKEVYREIMEDKMDVENAELFLRWIMEGKVRVVVEEHDVPSPFAFNLEAIGSSD
VVLMEDRRELIKQLHRKIMEMIEASG
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgagcgcggaggggataaggcgagccgagcgcgagtacacggacgaggagatatttggg
atactcagcgagccggttagggagtggtttaagcggaagtttggaacgttcacccctccc
cagcgctacgccgttctggagatacacaaaggagagaacgtcctgatttcctccccaact
ggctctgggaagacgctctccgctttcctagcggcgataaacgagctcattctcctcgga
aaggaggggaagcttgaggatagaatctacgtcctctacgtctcacctctcagggccctc
aacaacgacataaagcgcaaccttgagggacctctgatggagatacaggaagtggcaaag
gagctcggctacgagcttccggggataagggtcggcataaggacgagtgacacttccagc
tatcagaagagcaagatggtgaagaaaccgccgcacatactcatcaccacaccggagagt
ttggcgatagctctgaacgcccccaagttccgcgagaggctgaagacgattaggtacctc
ataatcgatgaggttcacgctttggctgagaacaagcgcggaacgcaccttgctttgagc
gtcgaaaggctggcggagatggcggaggagaagttcgtgaggataggcctgagtgccaca
atccacccgcttgaggaggtcgccaagttcgtcttcggtttcgacgatgaagggaaaccg
aggcccggcctgatagtcgacgtcagcttcgcgaaggagaccgagataagggttgaaagc
gttgtcgatgacctcatctacaccgatgcaggaacgctgagcgaggccctttacaagcgc
ttagcggagctgatacgggagcacaggacgacgcttatcttcaccaacacgaggagcggt
gccgagagggtagccttcaacctgaagaagcgctatcccgagttcgaaggtttgatagag
gcccaccactcctcgctgtccagggaggttcgtttggacgtcgaggagaggctgaagagg
ggcgagctcaaggcggttgtcacctcgacgagtttggagttggggatcgacatcggtaca
atagacctggttgtcctcatcggttcgccaaagagcgtgaaccgcgcgttacagcgcatc
gggagggccggccacaggctccatgacgtcagcaaagggatcatccttgccctagacagg
gacgacctggtggaggtaacggttctggcccacaacgcgaggaacagacgtctggaccgc
gtcaggatcccaaagaacccgctcgacgttttggtgcaacaccttttgggaatggcgctc
aacaaagtctgggaagtcgaggaagcctatcgcgtcgtgaggcgcgcttacccctaccgc
gaccttcccttcgaggacttcatgagtgtcctccactatcttgctggtgaatacgccggc
ttggaggagaggaaggtctatgcgaagatatggctcgaggacggtcgcttcggaaggcgc
ggcaagatgacacgggcgatatactacatgaacgtcggcaccatacccgacgaagcgaag
atacgcgtttacacgatggacaaacagatgatcgggacggttgaggaagagtttgccgag
agactgatgcccggcgacatcttcgttctggcgggcagaacctatgaattcgtcaagagc
aggggcaacaagatatacgtcatcccgaggcagggcgcgaagcccactattccggcatgg
ttctcggagatgctcccactgagcttcgatctggccctcgacatccagcgctttagacgg
gaggtttccgaactggtcaacaacaggagagccaaggacttcctgatgagaaagtacggc
atagacgagcgcgccgcgagggccatcctggcgtacttccgcgagcaggcgcgatactcc
accgtgcccgacgacgagacggttctcgtcgaggtcgtcaggggagaaaataggaacgag
tacttcttccacaccctcgtcggcaggcgggcgaacgacgcgctcagcagggccttcgcc
tatctcgtgagccagtggaagaggtgcaacgtcggtgttgcgataaacgacaacggcttc
gcccttatccttccgccggaggccgagctgaccgaggacgagataaggggactcttccag
gttgaagacctcagggagacgctcaagagagcactcgacaacacggagctcctcaagagg
cgtttccgccacgttgccaaccgcggactgctcatactgagacgctacataggcaggagc
aagcgcctcggaaggcagcaggtgatggcggtcgctctgctcaaggtgctgaaggagaat
cacccggacttcccgctcctgaaggaggtctaccgcgagataatggaggacaagatggac
gtggagaacgcggagctgttcctgaggtggatcatggaggggaaggtaagggtggtggtt
gaggagcatgacgttccgagtccctttgcattcaacctcgaggcgataggttcgagcgat
gtggtgctcatggaggacaggcgcgagctgataaaacagctgcacagaaagataatggag
atgatagaggcctcagggtaa

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