Thermococcus pacificus: A3L08_07220
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Entry
A3L08_07220 CDS
T05192
Name
(GenBank) mRNA surveillance protein Pelota
KO
K06965
protein pelota
Organism
tpaf
Thermococcus pacificus
Pathway
tpaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A3L08_07220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpaf03019
]
A3L08_07220
Messenger RNA biogenesis [BR:
tpaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
A3L08_07220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
baeRF_family10
DrmE_N
Host_attach
baeRF_family3
SHD1
RNase_P_p30
Motif
Other DBs
NCBI-ProteinID:
ASJ07126
UniProt:
A0A218P8L3
LinkDB
All DBs
Position
1302587..1303660
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AA seq
357 aa
AA seq
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MQIIHQDVKEGKVKVKAETLDDLWHLYHIIDPGDIVYAKTLRKQSQRSDSLRAEKVEVIP
VFLGVKAEKINFHKFANQVRVTGPIVYASREDVPLSKYHTIAIEEGTVVTIEKPRWKEHH
IERLKEAVEASKRARVMIVVIDDGEADMALVREYGVEILNSIRHNLGGKRYNTDRESEEK
KFFHDVAKTMEEVMNRENVEKAIVAGPGFVKEDFYKFLQENYPELAKKVVIEDTSVTGRT
GIYEVIKRGTVERVYHENRVAKEVQLVEKVLENIARNNGLAAYGLKEVEEAVNYGAVETL
LVLDELLKGEHREKIEELMDAVRYSRGEVVVVSSEHEGGEKLKALGGLAALLRFRVK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcagataatccaccaggacgtcaaagagggcaaggtgaaggtcaaggctgagactttg
gacgacctctggcatctctatcacatcatcgaccctggcgatatcgtctacgcaaaaacc
ctccgcaagcagagccagaggagcgattccctaagggctgagaaggttgaagttatcccg
gttttcctcggagttaaagcggaaaagataaactttcacaagttcgccaaccaggttcga
gttaccggaccgatagtctacgcgagcagggaagatgttcccctcagcaagtaccacacg
atagcgatagaggaaggcactgtcgttacgatagagaagccccgctggaaggagcaccac
atcgaaaggctaaaggaagcggttgaggcctccaagagagcaagggtgatgatagtcgtc
attgacgacggagaagcagatatggctctcgtcagagagtacggcgttgagatactcaac
agcatacgccacaacctcggcggaaagcgctacaacaccgacagggaaagcgaggagaag
aagttcttccacgacgtggcaaagacgatggaggaagttatgaaccgcgaaaacgtcgag
aaagccattgtggctggacctggattcgtaaaggaggacttctataagttcctccaggag
aactacccggagcttgcaaagaaggtcgttatagaggacacgagcgtgacgggaagaacg
ggcatctacgaagtcatcaagcgcgggaccgttgagagggtctaccacgagaacagggtt
gccaaggaagtccaactagtcgagaaggttttggagaacatcgcaaggaacaacggctta
gcggcgtatggtctcaaagaggtggaggaagcggtaaactacggtgccgttgagacgctc
ctcgttctggacgaactcctcaaaggagagcacagggagaagatagaggagctgatggac
gcggtcaggtattcccgcggtgaggtggtggttgtaagctcagagcacgaaggcggcgaa
aagctgaaggcgctgggaggtcttgcggccctgctgaggttcagggtgaagtga
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