KEGG   Thermococcus pacificus: A3L08_07950
Entry
A3L08_07950       CDS       T05192                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
tpaf  Thermococcus pacificus
Pathway
tpaf03030  DNA replication
tpaf03410  Base excision repair
tpaf03420  Nucleotide excision repair
tpaf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3L08_07950
   03410 Base excision repair
    A3L08_07950
   03420 Nucleotide excision repair
    A3L08_07950
   03430 Mismatch repair
    A3L08_07950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpaf03032]
    A3L08_07950
   03400 DNA repair and recombination proteins [BR:tpaf03400]
    A3L08_07950
DNA replication proteins [BR:tpaf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    A3L08_07950
DNA repair and recombination proteins [BR:tpaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A3L08_07950
   MMR (mismatch excision repair)
    Other MMR factors
     A3L08_07950
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    A3L08_07950
SSDB
Motif
Pfam: PCNA_N Rad1 PCNA_C Rad9 Hus1
Other DBs
NCBI-ProteinID: ASJ07257
UniProt: A0A218P8Z0
LinkDB
Position
1443445..1444194
AA seq 249 aa
MPFEIVFDGAKDFADLIATASNLIDEAAFKITEEGISMRAMDPSRVVLIDLNLPESIFSK
YEVEEEETVGVNMDHFKKILKRGKGKDTLILRKGDENFLEITFEGTAKRTFRLPLIEVEE
LELDLPELPFTAKVVVLGEVLKEAVKDASLVSDSMKFIARENEFIMKAEGETNEVEIKLT
LEDEGLLDLEVEEETKSAYGISYLADMLKGIGKADEVIIKFGNEMPLQMEYPIRDEGKLI
FLLAPRVEE
NT seq 750 nt   +upstreamnt  +downstreamnt
atgccgttcgagatagtttttgatggtgccaaggatttcgccgatcttatagccaccgca
agcaacctcatcgacgaggcggcctttaagataaccgaggaaggaataagcatgcgtgcc
atggacccgagcagggtcgttctcatcgacctcaacctgcccgagagcatattctccaag
tacgaggtcgaggaagaggagaccgttggagtgaacatggaccacttcaagaagattctc
aagcgcgggaagggcaaggacaccctcatactcaggaagggcgacgagaacttcctcgag
ataaccttcgaggggacggcaaagaggaccttccgccttccgctcatagaggtcgaggag
cttgagctcgaccttccagagcttccgttcacggcaaaggtcgtcgtcctcggcgaggtt
ctcaaggaggccgttaaggacgcttcccttgtcagtgactcaatgaagttcatagccagg
gagaacgagttcatcatgaaggccgagggtgagaccaacgaggttgagataaagctcacc
cttgaggacgaaggtttactcgacctcgaagtcgaagaggaaaccaagagtgcctacgga
atcagctaccttgcggacatgctcaagggcatcggcaaggccgacgaggtcataatcaag
ttcggcaacgagatgccgctccagatggagtatccgataagggacgagggcaagctcata
ttcctcctcgcgccgcgcgtcgaggagtga

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