KEGG   Thermococcus pacificus: A3L08_08655
Entry
A3L08_08655       CDS       T05192                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
tpaf  Thermococcus pacificus
Pathway
tpaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A3L08_08655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpaf03019]
    A3L08_08655
Messenger RNA biogenesis [BR:tpaf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A3L08_08655
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B RMMBL PaREP1 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ASJ07382
UniProt: A0A218P9B9
LinkDB
Position
1571458..1573011
AA seq 517 aa
MKITVYDGATTIGGSKIHLEEDNNGIFLDFGMNFAKYARYYEEFISERPSRGIHDLWRLG
LIPRLNVYRRDLIPADILEEVRQSPKVSVSAVLISHAHLDHVGNIAFLDEKVPIVGSPTT
MIILKALRDTSRGSHMGMELSYYALRKPSDSNPYVLEANRKLKYYASRDIFLTEKLPEEG
MSFLTWRANVELAENPNRVNYIRGSNVSLVEDQDLGFEIRAYPVDHSIFGAIAYIVEGDI
SVAYTGDFRLHGKNADKTKEFIRAAKSAQVLITEGTRAGRGDDVNVSEEEVYQNAKAIVD
DAKGLVVADFSARNFERLESFKRIAEETGRQLVVTTKDAYFLHALGLIDGQNHLKGLRVY
RNSKAKVEKWEEWVFINYPEIGITPEELRREQENYILCFSFYDMPHLLDVMPDGGVYIYS
SSEAFTEEQTFSFLRLWNWLQYFRFEVHGFSVDADGKPTFEKGLHASGHISKEELEEVIN
DIDPDVLIPVHTESPYWFEERWSEKVVLLKDGESFEV
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgaaaataaccgtctatgatggggccaccaccattggaggttcaaaaatccacttggaa
gaagacaacaatggcatctttttggactttggcatgaacttcgcaaaatatgcccgttat
tatgaagagttcataagcgagaggccctcccgcggaatacacgacctctggagactcggc
ctgataccaaggctcaacgtttaccggagagaccttattccggctgatatcttggaagag
gtccggcaatccccaaaggtgtctgtcagcgcagttctgataagtcatgcccaccttgat
cacgttggaaacatcgcgttccttgatgagaaagtcccgatcgttggctctccaaccaca
atgataatcctcaaggctttgagggacacaagccgggggagtcacatggggatggagttg
tcttactatgctctaaggaagcccagcgactcgaacccctatgttctcgaagccaacagg
aagctaaagtactatgccagcagagacatttttctaaccgaaaagctcccggaggagggg
atgtcattcctcacatggagggccaatgttgaactggcagaaaaccccaacagggtgaac
tacatacgggggagtaacgtttccctagttgaggaccaagatctcggttttgaaatccgc
gcttatcctgtggatcattcaatcttcggcgccatcgcttacatcgttgagggagacatt
agcgttgcgtacaccggagacttccgtcttcatggaaagaacgcggataaaacaaaggag
ttcatcagggctgcgaaaagcgctcaggttctgataaccgagggcacgagggccggaaga
ggagatgacgtgaacgtttcggaagaagaagtttatcagaatgcaaaagccatcgtggat
gatgccaaagggcttgtagtggccgatttctcggctagaaacttcgagcggctagagagc
ttcaagaggattgccgaggaaactggcaggcagctggtagtgaccacgaaggacgcatac
ttcctccacgctctgggcttgatagacgggcagaaccacctaaaaggtctgagagtttac
aggaactccaaggcaaaggttgagaagtgggaggaatgggttttcataaactaccccgag
atcgggataacacccgaagagcttcgtagggaacaggaaaactacatcctctgcttctcg
ttctacgacatgccgcaccttctggatgtaatgcccgatggaggggtttacatctactcc
tcgagcgaggcttttacggaggagcagaccttcagctttctgaggctctggaactggctc
cagtacttccgtttcgaggttcacgggttcagcgttgatgccgacggaaagcccaccttt
gagaaggggctccatgcgtctggtcacatctctaaggaagagctggaagaggtcatcaat
gatattgacccggacgttttaatcccagtgcacacggaaagcccatattggtttgaagag
agatggagtgaaaaagtcgttctcctgaaggatggagaaagttttgaggtgtaa

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