Thermococcus pacificus: A3L08_08755
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Entry
A3L08_08755 CDS
T05192
Name
(GenBank) chromosome segregation protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tpaf
Thermococcus pacificus
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpaf03400
]
A3L08_08755
DNA repair and recombination proteins [BR:
tpaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3L08_08755
Archaeal homologous recombinant proteins
A3L08_08755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
Rad50_zn_hook
AAA_21
AAA_29
GAS
BLOC1_2
ABC_tran
ABC_tran_CTD
AAA_25
AAA_13
SbcC_Walker_B
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ASJ07401
UniProt:
A0A218P9D5
LinkDB
All DBs
Position
1595757..1598420
Genome browser
AA seq
887 aa
AA seq
DB search
MRIRRIKIKNFRAHEKSEVEFSDGINLLIGQNGAGKSSILEAIFAALYMGHPSFPRGYLQ
ANTRVNAKGGIVLALEFEHDGKTYRITRDTKKSELLEDGALIAEKSSDIARWVERNVYPI
QVFTNALYIRQGEIEGIITNREIMEKVLRKVLGIEDYENAEKNAAEVIRELRRKRDYLRK
LVERKAEVEESLRDAEKRFSETLRRISELRERARKLEGEFEEAEKEYSRLKALKEELEGL
EKRKAIVEQRIRAEKDRIEDYEGQIFEVEREIEELEEKFSRLKELEPLEKEYLKLKSLLS
LKDELAKLELSTARLAEKKKTLEEKTSRINEVSSKIAELEKEETALRETYEELKRKNSLH
QRALQLKAEAERYRSELEKAGTTPEEIEEGLKSIEKAKEELEKLREEVARTREEMASLTG
LKESLIENLSKLEGAKVCPLCKRPIEEHDEEEIKREYDAEIASIEKKLKGLEKKLETLRE
REPELKETIRKEPKLIRLKKTADLLREVEEKLSKYDLEELEKAAEEFENTKARLIEIKKE
LRHLREELEELENARKELERIETRLAEIEVEKGKITEKLGGEGFDSFDEVEGRLKELEPA
YREYLSLKGVPAQLERARKKLTLLEKRRDESIKTLGELEGELKGLKAEIEKRSREFSEEA
YREAEKRYIESARELEKAKAELKGAEELRNEVMKLLDELRAKRKEIEDAEKEIETVEKAI
ADMTAFKEKVARLKAEEELRGLEEVQKLAGETFSEMTEGKYQGIKLKREKKYGKERIELK
VLYAGNEVGLEFLSGGERIALGLAFRLALSLYKVGNLELLILDEPTPFLDEERRKKLVEI
ISSQLRKIPQVIIVSHDEELKDAADYVIRVENVGGKSRVEVESLGAY
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
gtgaggataaggcggattaaaatcaaaaacttcagggcacacgagaagagcgaggttgag
ttcagcgacggcataaacctgctgataggccagaacggcgctggaaaaagctcgatcctc
gaagcaatcttcgcggccctctatatggggcaccctagcttccccaggggctacctccag
gccaacacgcgcgttaacgcgaaggggggcatagtgcttgctttagagttcgaacacgat
gggaagacatacaggataaccagagacaccaagaagagcgagctgcttgaagatggcgcc
ctgatagcggagaagagctcggacatagcccgctgggtggagcggaacgtctacccaata
caggtcttcaccaacgccctctacatacggcagggcgagatagagggtataatcacgaac
cgcgagatcatggaaaaggtcctgagaaaggttctcggcatagaggactacgagaacgcc
gagaagaacgccgccgaggtgataagggagctcaggaggaagagagactacctcaggaag
ctcgtcgaaaggaaggccgaggttgaggagagcctccgcgatgctgagaagcgcttctcc
gagacgctgaggaggataagtgagctcagggagagggcgaggaagctcgaaggagagttc
gaggaagcggagaaagaatactcccggctcaaggccctgaaggaagagcttgaagggctg
gagaagaggaaggccatcgttgaacagaggataagggccgagaaggataggatagaggac
tacgagggccagatcttcgaggtggagagggagatagaggagcttgaggagaagttctcc
cgcctaaaggagctcgagccgctggagaaggagtacctcaaactgaagtcgctcctctcg
ctcaaggacgagcttgcgaagcttgaactctccacggcgcgtttagcggagaagaaaaag
acgctcgaggagaaaacctccaggataaacgaggtctcttctaagatagcagagctggag
aaggaggagactgccctcagggaaacctacgaggagctgaagcggaagaactccctccac
cagcgcgccctccagttgaaggccgaggcggagaggtacaggagtgagcttgagaaagcc
ggaaccactcctgaggaaatcgaggaagggctaaagagcattgagaaagccaaggaagag
ctggagaagctccgcgaggaggtggcgaggacaagggaggagatggcaagcctcaccggg
ctgaaggagagcctcatcgagaacctttcgaagctcgagggggcaaaggtctgcccgctg
tgtaagaggcccattgaggagcacgatgaggaagagataaagagggaatacgacgctgag
atagcctccatcgagaagaagctgaaggggctggagaagaagttagaaacgctcagggag
agggagcccgagcttaaagagactattcggaaggagccaaagctcataaggctgaagaag
acggctgatctactgagggaagtcgaggagaagctttccaagtacgacctggaggagctt
gagaaagccgcggaggagtttgaaaataccaaggcaaggctcatagagataaagaaggag
ctgaggcacctacgggaggagcttgaggagcttgagaatgccaggaaagagcttgagagg
atagaaacacggctcgctgagattgaggtagaaaaggggaagattacagaaaagttgggg
ggcgaaggctttgactcctttgatgaagtcgagggccgtttaaaggaactcgaaccggcc
taccgcgagtatctgtctctaaagggcgttcccgcacagctcgagagggccaggaagaag
ctcaccctcctcgagaaaagacgcgatgagagtatcaagaccctcggagagctggaagga
gagttaaaaggactgaaggcggaaatagagaagcgttcaagggagttctccgaagaagct
tacagggaagctgaaaagaggtacatagagagcgcgagggagcttgagaaagccaaagcg
gagcttaagggtgccgaagaactgaggaatgaagtcatgaagctcctggatgagcttagg
gccaagaggaaggagatcgaggacgcggagaaggagatagagaccgtcgagaaggccata
gcggatatgacagccttcaaggagaaagtagcgaggctcaaggcggaggaagagcttcgg
ggactggaggaggtccagaaattggcaggggagaccttctccgagatgacagagggcaag
taccaggggataaaactcaagcgggagaagaagtacgggaaggagaggatagagctgaag
gtgctctacgcgggcaacgaggttggcctagagttcctgagcggcggcgagagaatagcg
ctcggattggcgttccgcttagctctctcgctctacaaggtggggaaccttgagcttctc
atcctggacgagccgacgcctttcttagacgaagaaaggaggaagaagctcgtggagata
atctcaagccagctcaggaagataccgcaggttatcatagtctcgcacgacgaggaactc
aaagacgcggcggattacgtgataagggtggagaacgtcggcggaaagagcagggtggag
gtcgagagccttggagcgtattag
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