Thermococcus pacificus: A3L08_09055
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Entry
A3L08_09055 CDS
T05192
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
tpaf
Thermococcus pacificus
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpaf03036
]
A3L08_09055
Chromosome and associated proteins [BR:
tpaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
A3L08_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG16
APG6_N
Crescentin
MscS_porin
CENP-F_leu_zip
AAA_29
CALCOCO1
GAS
ABC_tran_CTD
ACBP4_C
Laminin_I
DUF1664
ADIP
Flagellin_C
Lectin_N
ZapB
Fez1
Baculo_PEP_C
DUF3584
Motif
Other DBs
NCBI-ProteinID:
ASJ07456
UniProt:
A0A218P9I8
LinkDB
All DBs
Position
1657420..1660986
Genome browser
AA seq
1188 aa
AA seq
DB search
MPYIEKIEMKGFKSYGNRKVVVPLSKGFTAIVGANGSGKSNIGDAVLFVLGGLSAKAMRA
TRISDLIFAGTKTEPPAKYAEVAMYFNNEDRGFPVDEDEVVIKRRVYPDGRSTYWLNGKR
TSRSDILDVLSAAMISPEGYNLVLQGDITKFIKMSPTERRLLIDEISGIAEYDAKKEKAL
QELKQAEENLARVDLLIREVKAQLDKLEKERNDALRYLDLKDRVEKAKVTLLLGEIRKLQ
SLIEESNLRDKEIEAEIAAMEARLKDIAREIVAKEKELNAVEKELEEKSEDGILEVTRKI
SEVQSKIEMARKNIELAHKEIEDSQRRLAKAKEELKKVSEEIEKSKSAINRWSKRREKLK
AEIKEKEVVKNELVIKLGEIDRDFAVAKEEFDKVVDELEEAKKELYMKESDIKKFEEEIE
RAKAKIAQNNAKKVALKSKIGEARKSLESKRSELGDIDGKISKAEARLRKAEKELEEKTK
ALRKTESELAKAKEELIKAEAQREVRGNRAVDFLKGQNIPGLYGTLGELITVADEKYALA
VEVALGGNYDNVVVEDDRVAEKAIKLLKEKKLGRLTFLPLNKIKPRSMREKPPLGVPAID
VVHYDPRFKNAVAYALGDTLIVEDMDEARTVGIGKVRMVTLGGELLERSGAITGGHYRPR
GKLGVNVDEIRKRVEKLEREKEALESAVNALKLEVRGLENELFNLRMKKSELSKDLQVVQ
NEMDRLLAEDKALAEEIEENERLIEALEKKIHDTKGEMAKLRGRIERLEKKREKLKRALE
NPEARELNQKIREVEAEISKLREELGKVESKLEGLEVRINEELLPRKADLEEEIEGLVNR
INALRANIGENEKAIKDFEAELEELRKAEENVKDELKGLRERRERLKNEIIDLRSEKDEL
SSKLQELRIEANTLKIKLAQYEATLKEKQDELKHFDPKLIKSIKEIPLELEALREQIEKM
EEEIRSLEPVNMKAIEDFEVVERRYLELKSKREQVVAEKESIEEFIEEIEGQKRNVFMQT
LNEIAKNFSELFAKLSPGGSARLILENPEDPFAGGLEIEAKPAGKDVKRIEAMSGGEKAL
TALAFVFAIQRYKPAPFYLFDEIDAHLDDANVKRVADLIKEASQNSQFIVITLRDVMMAN
ADKIIGVSMRKGVSRVVALSLEKAMKILEEARKKSEAEHAEMFGHLSG
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgccttacattgagaagattgaaatgaagggcttcaaatcctacggtaatcgaaaggtc
gtcgttccgctttctaaggggtttacagcgatcgtaggtgccaacggttctggaaagagc
aacataggtgacgccgttctcttcgttctcggcggtctgtccgccaaagcgatgcgtgcg
acgaggataagcgacctcatcttcgcgggcaccaagaccgagcctccggcgaagtatgcc
gaggttgcgatgtacttcaacaacgaggacagaggctttccggttgacgaggacgaggtc
gtgataaagcgccgcgtttatcccgacgggaggagcacctactggctcaacggcaaaagg
acgagcaggagcgacatactggacgtcctcagtgcggcaatgatatcgcctgagggctac
aacctcgttctgcagggtgacatcaccaagttcatcaagatgagccccaccgagaggagg
ctcctcatcgacgagatttcgggcatagcagagtacgacgccaagaaggagaaagccctt
caagagctcaagcaggcggaagagaatctggcgcgcgtcgatctgctcatacgcgaggtt
aaggcccagctcgacaagctcgaaaaggagcgcaacgatgcgcttcgctacctcgatcta
aaagacagggtcgagaaggccaaggtcacgctccttctgggagagataaggaagctccag
agcctcatagaggagagcaacctccgggacaaggagatcgaggccgagatagcggctatg
gaagctcgcctgaaggacatcgccagggagatagtcgccaaggagaaggagctgaacgcg
gtagagaaggagcttgaggagaagagcgaagacggaatcctcgaggtcacgaggaagata
agcgaggttcagtcgaagatcgagatggccaggaagaacatcgagctcgcccacaaggag
atagaggacagccagaggaggctcgccaaggcgaaggaggagctcaagaaggtctctgag
gagatagagaagagcaagagcgccataaaccgctggagcaagaggcgcgagaagctcaag
gcggagataaaggagaaagaggtcgtcaagaacgagcttgtcatcaagctcggtgagata
gacagggacttcgcggttgccaaagaggagtttgacaaggtcgtggacgagctggaggag
gccaagaaggagctctacatgaaggagagcgacattaagaagttcgaggaagagatagag
cgagcaaaggccaagatcgcccagaacaacgcgaagaaggtcgccctcaagtccaagata
ggtgaggcgaggaagtccctggagtcgaagcgctccgagctgggtgatatcgacggcaag
atatcaaaggccgaagcgagactcaggaaagccgagaaggagcttgaggagaagacaaag
gccctcaggaagacagagagcgaactggccaaggccaaggaggagctcataaaggcggag
gcccaacgcgaggttcgcggaaaccgcgccgttgatttcctgaagggacagaacattccc
ggcctctacggcacactcggcgagctgataaccgtggcggacgagaagtacgcattagcc
gtggaggtggccctcggcggcaactacgacaacgttgtcgttgaggacgacagagttgcc
gagaaggccataaaactccttaaggagaagaagctcgggaggctcaccttccttccgctc
aacaagataaagccccgctcgatgcgtgaaaaacctccccttggagtcccagctatagac
gtcgtccactacgatccgcgctttaagaacgcggttgcctacgcgctcggagatacgctt
atagttgaggacatggacgaggcgagaaccgtcgggatagggaaggtccgcatggtgacc
ctcggcggtgagctgctcgagaggagcggtgccataaccggcggccactaccgcccaagg
ggcaagctcggagtcaacgtcgacgagataaggaagcgcgtcgaaaagctggagcgcgag
aaggaagcccttgaatcggccgtcaacgccctcaagctggaggtcagggggctggagaac
gagctcttcaacctgcgtatgaagaagagcgagctgagcaaggacctccaggtggtccaa
aacgagatggacaggcttctggccgaggacaaagccctagccgaggagatagaggagaac
gagaggctcatcgaggctctagagaagaagatacacgatactaagggcgagatggccaag
ctcaggggaagaatagagcgccttgagaagaagcgcgagaagctcaagagggccctcgag
aacccggaggcgagggagctcaaccagaagatacgcgaggtggaggcggagataagcaag
ctccgcgaggagctcggaaaggtcgagagcaagctcgaagggctcgaggtcaggataaac
gaggagctgctcccgaggaaggccgatctcgaggaggagatagagggcctcgtcaacagg
ataaacgccctcagggcgaacatcggggagaacgagaaggccataaaggacttcgaggcc
gagctcgaggagctcaggaaggccgaggagaacgtcaaggacgaactcaaggggctccgc
gagaggcgcgagaggctcaagaacgagataattgacctgagaagcgagaaggacgagctt
tcttcaaaactccaggagctccgcatagaggccaacacgctaaagataaagctcgcccag
tacgaggctacgctgaaggagaagcaggacgagctgaagcactttgatccaaagctcatc
aagagcatcaaggagataccgctcgaacttgaggccctccgcgagcagatagagaagatg
gaggaggagatacgctccctcgagccggtcaacatgaaggccatagaggacttcgaggta
gttgagcgccgctaccttgagctcaagagcaagcgcgagcaggttgtcgccgagaaggag
agcatagaggagttcatcgaggagatagagggccagaagaggaacgtcttcatgcagacc
ctcaacgagatagccaagaacttctcggaactcttcgccaagctctcgccgggaggaagc
gccaggctcatcctcgagaaccctgaggatccgttcgcgggcggccttgagatagaggca
aagcccgctggaaaggacgtcaagaggatcgaggcgatgagtggtggtgagaaggcttta
actgccctcgccttcgtcttcgcgatacagcgctacaagcccgcccccttctacctcttc
gacgagatcgatgcacacctcgacgatgccaacgtcaagcgcgttgccgacctcataaag
gaggcctcgcagaacagtcagttcatcgtgataaccctgagggacgtcatgatggccaac
gcggacaagataatcggtgtcagcatgaggaagggcgtcagcagggtcgtcgccctaagc
cttgagaaggccatgaagatcctcgaagaggcgaggaagaagagcgaggcggaacacgcc
gagatgttcgggcacctgagcgggtga
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