KEGG   Thermococcus pacificus: A3L08_09450
Entry
A3L08_09450       CDS       T05192                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tpaf  Thermococcus pacificus
Pathway
tpaf03030  DNA replication
tpaf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3L08_09450
   03410 Base excision repair
    A3L08_09450
   03450 Non-homologous end-joining
    A3L08_09450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpaf03032]
    A3L08_09450
   03400 DNA repair and recombination proteins [BR:tpaf03400]
    A3L08_09450
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tpaf04147]
    A3L08_09450
DNA replication proteins [BR:tpaf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    A3L08_09450
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     A3L08_09450
DNA repair and recombination proteins [BR:tpaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A3L08_09450
Exosome [BR:tpaf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   A3L08_09450
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc TPR_8
Other DBs
NCBI-ProteinID: ASJ07526
UniProt: A0A218P9Q0
LinkDB
Position
1727598..1728623
AA seq 341 aa
MGVQIGELVPRKEIELQNLYGKKVAIDAFNAMYQFLSTIRQRDGTPLMDSKGRITSHLSG
FFYRTINLMEAGIKPAYVFDGKPPEFKKKEIEKRREAREEAEEKWHEALEKGDLEEAKKY
AMRATRVNEQLINDAKKLLELMGIPVVQAPSEGEAQAAYMAAKKKVYASASQDYDSLLFG
APKLVRNLTITGRRKLPGKNVYVEVKPELIVLEEVLKELGIDREKLIELAILVGTDYNPS
GIKGIGPKKALTIVKRTKDPLKKYQKESEVDLYAIKEFFLNPPVTDEYELRWREPDEEGI
LKFLCDEHDFSEERVKSGLERLKKAVESGKQRTLESWFGKP
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggagttcagatcggtgagctggtaccaaggaaggagatagagctccagaacctctac
gggaaaaaggtcgctatcgatgccttcaacgccatgtaccagtttctctcaacgataagg
caacgcgatggaactcctctaatggactcgaagggcaggataacctctcacctcagcggc
ttcttctacaggacaataaacctgatggaggccggaataaagcccgcctacgtcttcgac
ggaaagccgccagagttcaagaagaaggagatagagaagcgccgcgaggccagggaagag
gctgaggagaagtggcatgaggcccttgaaaaaggtgacttggaggaggcgaagaagtac
gcgatgagggcaactcgcgttaacgagcaactcataaacgatgccaagaagctcctcgag
ctaatggggattcccgttgttcaagccccgagcgagggtgaggcccaagcagcttacatg
gccgccaagaagaaagtttacgcctcagcgagccaggactacgactcgctcctcttcggc
gcgccgaaactcgtgagaaacctcaccataaccggcaggaggaagctcccgggaaagaac
gtctacgttgaagtgaagcccgaactaatcgttctggaggaggttctcaaggagctcggc
atagacagagaaaaacttatagagctggcgattcttgttgggacggactacaatcccagc
gggataaagggcattggcccgaagaaggctttgaccatagtcaaaagaaccaaagacccg
ctcaagaagtaccagaaggagagcgaggtcgacctctacgcgataaaggagttcttcctg
aacccgccagttacggacgagtacgagctgagatggcgcgagcccgacgaggagggaatt
ctaaagttcctctgcgatgagcacgacttcagcgaggagagggttaagagcggccttgaa
aggctgaagaaagcggtggagagtggaaagcagaggacgcttgagagctggttcgggaaa
ccttaa

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