Thermococcus pacificus: A3L08_09540
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Entry
A3L08_09540 CDS
T05192
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tpaf
Thermococcus pacificus
Pathway
tpaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
A3L08_09540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpaf03019
]
A3L08_09540
03009 Ribosome biogenesis [BR:
tpaf03009
]
A3L08_09540
04131 Membrane trafficking [BR:
tpaf04131
]
A3L08_09540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpaf04147
]
A3L08_09540
Messenger RNA biogenesis [BR:
tpaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
A3L08_09540
Ribosome biogenesis [BR:
tpaf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
A3L08_09540
Membrane trafficking [BR:
tpaf04131
]
SNARE
SNARE associated proteins
Others
A3L08_09540
Autophagy
Aggrephagy
Other aggrephagy associated proteins
A3L08_09540
Exosome [BR:
tpaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A3L08_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_22
AAA_14
AAA_5
TIP49
AAA_33
Vps4_C
nSTAND3
RNA_helicase
AAA_28
AAA_24
AAA_18
NPHP3_N
IstB_IS21
Mg_chelatase
Bac_DnaA
Sigma54_activat
ABC_tran
AAA_7
DUF815
ATPase_2
AAA_17
Parvo_NS1
TsaE
NB-ARC
Zeta_toxin
SLFN-g3_helicase
AAA_3
AAA_25
PhoH
Zot
AAA_lid_PRS2_C
ATPase
DUF5828
Motif
Other DBs
NCBI-ProteinID:
ASJ07544
UniProt:
A0A218P9T6
LinkDB
All DBs
Position
1741588..1743978
Genome browser
AA seq
796 aa
AA seq
DB search
MAERREVKLKVASAYQRDVGRGIVRIDRKAMREIGVQSGDIIEIIGTKNTAAVVWPAYPE
DEGLGIIRMDGTLRKNAGVGLGDEVTIRKAEVKEAKKVIVAPTEPIRFGGDFVEWLHSRL
VGRPVVRGDYIKVGILGQELTFVVTATTPAGIVQITEFTDFQVSEKPVKEVSKTAALGVT
YEDIGGLKDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEA
NAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKREEVSGEVEK
RVVSQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDRELEVGVPDKQGRKEILQ
IHTRGMPIEPEFRKSKVIEILEELERNETYRDAAEKAIAKVKKAESEEEIKKALREVEER
LYDEVKAKLIDSLLEELAEVTHGFVGADLAALAREAAMAALRRLIQEGKIDFEAEHIPKE
VLEDLKVTRRDFYEALKMIEPSALREVLLEVPNVHWDDIGGLEDVKEELREAVEWPLKYP
EAFMGLGINPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIR
EIFRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRLINQLLTEMDGIQENSGVVVIGAT
NRPDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRRVPLAEDVSLEELAKRTEGYT
GADIEAVVREAAMLAMRRALQEGIIRPGMKADEIRQKVKVTMKDFEEALKKIGPSVSKET
MEYYRKVQEQFKQARG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaggagagaggttaagttgaaggtagcttccgcttaccagcgcgacgttggt
aggggaatagttaggatcgacagaaaggctatgcgcgagattggagtccagagcggcgac
ataatcgagatcatcggaaccaagaacaccgccgcggtggtctggcctgcttacccagaa
gacgagggactcggcataatccgcatggacggaaccctcaggaagaacgcgggcgttgga
ctcggagatgaggttacgataaggaaggcagaggtcaaggaggccaagaaggtcatcgtt
gccccaaccgagccaatacgctttggtggagacttcgtcgagtggctccacagcaggctc
gtcggcaggccggtcgtcaggggtgactacattaaggtcggaatcctcggccaggagctg
accttcgtcgttactgcaacgacaccggccggaatcgtccagatcacagagttcactgac
ttccaggtcagcgagaagcccgttaaggaggtcagcaagactgccgcacttggcgtcacc
tacgaggacatcggcggcctcaaggacgtcatccagaaggtcagggagatgatagagctc
ccgctcaagcacccggagatattcgagaagctcggcattgagccgcccaagggtgtcctg
ctctacggtcctcccggaacaggtaagaccctgttagcaaaggcagtcgccaacgaggca
aacgcccacttcatagcgataaacggaccggagataatgagcaagtactacggtgagagt
gaggagaggcttagggaggtcttcaaagaggctgaggagaacgccccggcgataatcttc
atcgacgagatcgacgctatagcgccgaagagagaagaggtcagcggagaggtagagaag
agggttgtcagccagctgctcaccctcatggacggtctcaagagccgcggaaaggtcatc
gtcattggagccaccaacaggcccgacgcgattgacccggcactgaggaggccaggaagg
ttcgaccgcgagcttgaggtcggtgttccggacaagcagggaaggaaggagatactccag
atccacaccagaggaatgcccatcgagcctgagttcaggaagagcaaggtcattgagata
ctcgaggagcttgagaggaacgagacctacagggatgccgcagagaaggctatagccaag
gtcaagaaggccgagagcgaggaggagataaagaaggccctccgcgaggttgaggagagg
ctctacgatgaggtcaaggcaaagctaatcgacagcctgcttgaggagctcgccgaggtt
acgcacggcttcgtcggtgccgacctcgcagccctggcgagagaagccgcaatggccgcc
ctcaggaggctgatacaggagggcaagatagacttcgaggcggagcacatacccaaagaa
gtgcttgaagacctgaaggtcaccaggagggacttctacgaggccctcaagatgatagag
ccttcagcgctcagggaggtcctgcttgaggttccgaacgtccactgggacgacattggt
ggcctagaggacgtcaaggaggagctccgcgaggcagtcgagtggccgctcaagtacccg
gaggcattcatgggcctcggcatcaacccgccgaagggtatcctgctctacggaccaccc
ggaacaggtaagaccctccttgcaaaggcagtagcgaacgagagcgaggctaacttcata
gccatcaagggtccggaagtgctgagcaagtgggtcggtgagagcgagaagaacatccgc
gagatcttcaggaaggcgaggcaggcggccccaacggtgatattcatcgacgagatagac
gcaatcgctccgcgcaggggaaccgacgtgaacagggtcaccgacaggcttatcaaccag
ctcctgactgagatggatggaatccaggagaacagcggcgtggtcgtcataggcgctacc
aacaggccggacatcattgatccagccctgctcaggccgggaaggttcgacaggctcatc
ctggttccagcaccagacgagaaggccaggctcgagatattcaaggtccacaccagaagg
gttccgctggctgaggatgtcagcctcgaggagctggccaagaggaccgagggatacacc
ggtgccgacatcgaggccgtggtcagagaggcagcgatgctcgccatgagaagggcactc
caggagggcatcatacggcccggcatgaaggccgacgagataaggcagaaggtcaaggtc
accatgaaggacttcgaggaggccctcaagaagatcggcccgagcgtgagcaaggagacg
atggagtactacagaaaggtacaggagcagttcaaacaggccaggggctga
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