Tympanuchus pallidicinctus (lesser prairie-chicken): 128071711
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Entry
128071711 CDS
T08967
Symbol
ZBED1
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128071711 (ZBED1)
04121 Ubiquitin system [BR:
tpai04121
]
128071711 (ZBED1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128071711 (ZBED1)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128071711 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
128071711
NCBI-ProteinID:
XP_052520659
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYNTI
REIVLKELTDVLWCGISTDMWRSENQNRSYVTVAVHFLSSSHSNCLVVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCSLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLEASEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENTFRTEEKFFTVSEEPPVKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENTRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNVNNNFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccgtcagatctaaagttagtggctcacccaaga
gcaaagagtaaagtgtggaagtactttgggtttgataccaatgcggaaggatgcatatta
cagtggaagaaaatctactgccgtatttgcatggcacagatcgcctattcgggaaacact
tccaacctttcctaccacctcgagaaaaaccaccccgacgaattctgtgaatttgtgaaa
agtaacaccgagcaaatgagggaggcctttgcaactgcattttcaaaaatcaagccagaa
tcatcgcagcaggttgttcaagatagtctcatcatgaagacttaccagaactacgaaaac
aaaaagcatcaggagctgacgtctgcagtcatcagcttgatctgtgagggcatgtatcct
gcttctattgtcgacgaacccactttcaaggctctcttgagaacagctgatcccaggtat
gaacttcctagccggaagtatttctgtacgaaagctattcctgaaaaatacaacaccatt
agagagatcgtgttaaaagagctcactgacgtcctgtggtgtggcatatccacagacatg
tggaggagtgaaaaccagaacaggtcgtacgtaactgtcgcagttcactttctcagcagt
agtcattccaactgcctggtggtcaactcacgttgcttaaaaacgtttgaagtaccagag
gataatactgcagagactattacacgagtcctttatgaaacattcatcgaatgggggatc
aatacaaaagtctttggtgctaccacagactacagcaaagacattgtgaaagcttgctct
ctcctcgatattccagtgcagatgccttgcttggggcacactttcaatgccggaatacaa
caagcttttcagctcccaaagctctgcagccttcttgccaggtgccgaaaactggtggag
tattttcagcagtctacggtagcaatgtatatgctgagtgagaagcagaagcagcagaat
attctgcactgcatgctggtgagcgatcgcgtttcctggtggggcagcacactggccatg
ttgcagcgcctcaaggagcagcagttcgtcatcgctgccgtcctcgtggaggacagcaac
aaccaccacctcatgctggaagccagcgagtggaatacaatcgaagggctggtggagctg
ctgcagcctttcaaacaggtcgcagagatgatgtctgcttccaagtacccgacaataagt
atggtgaagccccttctccacatgcttctcaacactaccctgaacatcaaagagaacgat
ttgaaagaaatcagcatggcgaaggaggtaatagctaaggagctgtcaactacctaccag
cacaccccagaaatagacatgttcctcaatgttgccactttcctggatcctcgctacaaa
aaactgccttttctttcagcctttgagaggcagcaggtggaaaacagagtggtggaagaa
gcaaaaagcctgctggagaaagtcaaagaaaacacttttcggactgaggaaaagttcttc
acggtttcggaagaacctccagtgaaaaaaataatcatctcctccactcctcctcctact
agcgtgatcaacaacatgcttgcagagatcttctgccagacgggaggtgtggaggaccaa
gaggagtggcacgctcagattgttgaggaattgagcaactttaagtctcaaaaagtgctt
gggttgaacgaagacccactaaagtggtggtctgacagactagcactgtttccagtttta
ccaaaggttcttcaaaaatactggtgtattttggccacaagggtctttcccgaacgcctt
tttggttcttctgctaacgttgtcagtgcaaagagaaaccggttggccccagcgcatgtg
gacgagcagatctttttgtatgaaaacactcggaatgggtcggaggcagaaccagaagat
gaagatgaaggagagtggggtttggaacaggaacagatttttaatttaaatgactcggta
aatgtaaacaacaatttctttaatatccgagacagtgggtttgtttaa
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