Tympanuchus pallidicinctus (lesser prairie-chicken): 128071726
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Entry
128071726 CDS
T08967
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128071726 (TTF2)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128071726 (TTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
128071726
NCBI-ProteinID:
XP_052520690
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MEAVVCAEHGSLCLLKTGVRDGPNKGKSFYVCGAQGSAPCGFVLPADVPPSYCLVHEGYM
VELQILVQQQHRDVYQLFYRCVNSKLNGKKWCGSVPWQDSKGTKPSKKLESQPKKAPVFN
PSGQRNPFKVIDKNCEASSWKQIKQGSGEESKAKGVEVEKGDVVESHKEKKPTSGSSTER
EHPEELKTEKQSKGCRSDSELKGNTISESKLCLSETWKGENTHQDKEKYGGSGKESNKSE
HVEKEPGGRSELFPVSFEKQSTNSKSPEKEKFTDKSLKNCGDRETRVKECIGGKNGEMKP
IPKENMTSTTVPQAASQCTLPKQGAGTAPSKTQVRPSLEQPADEVSDSDEVILVYSSSDE
SKPEKSVKGLQPREVPAETSGKSTQETSLLGAAASLHMEGPRDPEELRNHLEIQLRQKKN
TLATVNIQVLPDKGQRLVKQVQDLEAALSALNISTTDTTEKRENNASSGRCGEPLPNSFS
RPGGTKLITPLPLGDHKAGSSSSSHSHPSAAALGSSEYFGPGFGMNSGVQNLYGGRMTED
RIRAVHSAISDAINHLHKSLESCPTEQTVAEDPSGLKVPLLLHQRRALAWLLWRESQRPC
GGILADDMGLGKTLTMIALILTQKQVKTEKESKKQEMWLSRNDSTVIPSCSTLIICPASL
IHHWKKEIDRRVGFGKLRVYLYHGPNRDKHAEVLSEHDVVVTTYSLLSKEVPTSKEEGEF
PAKDHEVESGSSHCSPLLRVAWARVILDEAHTIKNPKVQTSIAVCKLRATARWAVTGTPI
QNNLLDMYSLLRFLRCSPFDEYKVWKYQVDNNTKKGGDRLRLLTRSLLLRRTKDQLDSTG
KPLVSLPQRSMQLHQLKLSAEEQSVYNVLFARSRSTLQSYLKRQEQKNEGREHAGSNPFE
KVAQDFGYSHKEFLASSQSASQVSSTAHVLSMLLRLRQCCCHLSLLKVALDQVNLTSEGL
SLSIEEQLSALTLSELQTPDSKSTVYLNGTAFNTDLFEITKESTKVSHLLAELKTIQSHP
ESQKSVVVSQWTSMLKVVAVHLQRLGLKYSVVDGSVNPKQRMDVVEEFNNNPKGPQVMLV
SLLAGGVGLNLTGGNHLFLLDMHWNPALEEQACDRIYRVGQQKDVVIHRFVCEGTVEENI
VQLQTRKKGLAQQVLAGKGETSKLTLADLKTLFGI
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtggtgtgcgctgagcatggctccctctgccttctgaagaccggcgtccgc
gatggccccaacaaggggaagagcttctacgtgtgcggggctcagggctcggcgccgtgc
ggctttgtcctgccggctgatgttcctccttcgtactgtttggtccatgaggggtacatg
gtggagctgcaaatcctggttcagcagcagcacagagatgtgtaccagttgttttaccga
tgtgttaacagtaagttaaatgggaagaaatggtgtggaagtgtgccatggcaggattca
aaaggtaccaaaccatcaaaaaaattagaatcgcagcccaagaaggcacctgtcttcaat
cccagtggccaaagaaatccattcaaggtgatagacaagaattgtgaagcatcatcctgg
aaacaaattaagcaaggcagtggagaggaaagtaaagcaaaaggagttgaagtggaaaag
ggtgatgtggtggagtcacataaagaaaagaagcccacctctggttcttccacagagagg
gaacatccagaagagctgaaaactgaaaaacaatccaagggatgtaggagtgattcagaa
cttaagggaaacacaatatctgaatctaaactttgtctttctgagacttggaaaggagaa
aatacccatcaggataaagagaagtatggaggaagtggcaaggaatccaataaatctgaa
catgtggagaaagagccaggtggcagatccgaactcttcccagtcagttttgaaaagcaa
agtacaaatagcaagtctccagagaaagaaaagttcacggataaaagcttaaaaaactgt
ggggatagagaaaccagagtgaaagaatgcattggtggaaagaatggagagatgaagcca
ataccaaaagaaaacatgacttccacaacagtaccacaagcagcatcacaatgtactctt
ccaaagcaaggagcagggacagcaccatccaagacacaagtcaggccgagtctggaacaa
cctgctgatgaagtttctgacagtgacgaagtaatacttgtttattcctcatcagatgaa
agtaaacctgagaaatcagttaagggtttgcaaccaagagaggttcctgcagaaacatca
gggaagagtacccaggagacctctttgcttggagctgcagcatcacttcatatggaagga
ccccgagaccctgaggaacttcgtaaccatcttgaaatccagctgaggcagaagaagaat
accttggctacagtgaacattcaggtgctgccagataaagggcaacggttagtaaagcaa
gtacaggatttggaagctgcactcagtgctcttaacatttcaacaacagatactacagaa
aaacgggagaacaatgcaagcagtggccgttgtggggaacctttgcctaactcgttcagc
agaccgggtggtacgaagttgataacaccactgcctcttggggatcataaggcagggtcc
tcttcaagctcacacagtcacccctctgctgctgccttgggttccagtgaatattttggc
cctggttttggaatgaactctggtgtgcagaatctgtatggaggaagaatgacagaagac
cgaattagggctgtgcacagcgcaataagtgatgccattaatcatcttcacaaatctcta
gaatcctgcccaacagagcagacagtagctgaggatccctctggtttgaaagttccactg
ctgctgcaccagagacgagcacttgcatggctgctctggagagagagtcaaaggccttgt
ggaggaattctggcggatgacatgggcctggggaagactctaacaatgattgctctaatt
ctgacccagaagcaggtgaagacagagaaagaaagcaagaagcaagaaatgtggctatcc
agaaatgattctactgttatcccttcctgcagcactttgatcatttgtcctgcatctttg
atccatcactggaagaaagagattgacagacgtgtgggctttggaaaactgagggtctac
ttgtaccatgggccaaaccgagataagcatgcagaagtgctctctgaacatgatgttgtt
gtcacaacctacagccttctatctaaggaggttcccacaagcaaagaggagggggaattc
cctgctaaggaccatgaagtagagagtgggtcatctcactgctcccctctcctcagagtg
gcttgggctcgagttatattggatgaagctcacactattaaaaatccaaaggttcaaacc
tccatagctgtgtgcaagctgagagccactgccagatgggctgtcactgggacaccaata
cagaacaacttactggacatgtactcccttctgaggttcctacgttgctctccttttgat
gaatacaaagtgtggaaatatcaggtagataacaacactaagaagggaggagataggcta
aggcttttaactaggagcctcttattacggagaactaaggaccagctggattccactgga
aagcccttggtatctttgccacagcgtagcatgcagttgcatcagttaaaactttcagca
gaggagcagtctgtatacaatgtgctctttgcaagatccaggtcaacactacagtcctac
ctaaagcggcaagagcagaaaaatgaaggcagagagcatgctggcagtaacccatttgag
aaagttgcacaagattttgggtacagtcacaaggaatttctggcaagctctcaaagtgct
tcccaagtctcaagtactgcccacgtgttgtctatgctgttgaggctccgtcagtgctgc
tgccatctctccttactgaaagtggctctggaccaagttaatttgaccagtgaaggcctt
tctctctctattgaggaacaacttagtgccttgaccttgtctgagctccagactcctgat
tcaaagtcaacagtctacctcaatggcacagcttttaatacagatctctttgaaatcacc
aaggagagcaccaaggtatctcacctcttagctgaactgaaaactattcagagtcaccca
gagtctcagaaaagtgttgttgtgtctcagtggacaagcatgctgaaagttgtggctgtg
cacctccagagactagggctgaagtattcagtggtggatggctctgttaatcctaagcag
agaatggatgtggtagaggagttcaataacaatcccaaagggcctcaggtaatgttggtc
tctttgctggctggaggtgttggcttgaacttgactggaggaaaccacctctttctcctt
gacatgcattggaatcctgcactcgaggaacaggcctgcgaccgcatttaccgagtgggg
cagcagaaggatgttgtgatacacaggtttgtctgtgaaggaacagtagaagaaaatatc
gtacaactccagaccaggaagaaaggtcttgctcaacaggtgctggcaggcaaaggggaa
acctcaaagctcactctggctgacctcaaaactctctttggcatctaa
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