Tympanuchus pallidicinctus (lesser prairie-chicken): 128071888
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Entry
128071888 CDS
T08967
Symbol
CGN
Name
(RefSeq) cingulin isoform X1
KO
K06102
cingulin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128071888 (CGN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_tail_1
DUF1664
Motif
Other DBs
NCBI-GeneID:
128071888
NCBI-ProteinID:
XP_052521006
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MQSPCCESLYTLWGHACPCEAAFPLWGQICPMGPCQPYGAASPQHWGVQTVGPTVTLPSP
QNSSTAPSMERTAEKQSPVDYGVQIRFINDLQEPKKAPKARAKPGSYGVAVRVQGIAGQP
FVVLNSGDKGGDSFGVQIKSDGSYPAGTTSPRPPDPPPEPDLPENPYVRPQPSHSVSDEE
NGAAPVPTRHKPRSKMGAELRRTQSHSNLLAAADEPMATGSRSSSTLSIAHPTHHKGSGT
GVAPSSDSESPGSRHAGGDIDTEPLSSVNSLISKFDGKVPQRGRAARRSRVAPEERKRSQ
SLDARSSVPDGRAVGAPSLLPTGAGRGGMVNRGTEERPQSKAQTELQLKSTPDLLRDQQE
VAQPSNSEDPKELIYGILKEGSRDSGTMLKRKAALVLEKLQEAAAPIKGKACSQPQHHAL
AQRVEELQERLDEESKLRQKLELTKERSTTRALEEAQEESARLRAALEKRMQELQRSTKE
LGEAKAAQTRAEEQLKAVRTDMGTAVDADALYKELDETREELEEALSSRQRLEEHLRQRE
RELTALKGALKEEVANHDRELERVRLQCHSDMEQLRRSVEDISQNRADLESEKQKIGVVV
RNLQRELEESAEETGHWREMFQRNKDELRAAKQELLQVKMEREEFEEELRELRERFTATR
EEVERARSSAVDPGEVEALRTELRRVREAQLELAEEKKQQEEVVRQREKELQALRSTVRD
EAQSHSGAMEQCHRDMERLREERDEAVRVKVSLEGEREAAEAALRKLQEQHEELQRKVQG
METQLKDYERMGENWEGSQARLREKVTKLEAERRRAEESLGEATDREQELLRAQRALEMR
LDEAQRGMARLAQEQQELSASLQDEQRQKEQLKRAKSELEEQKRLLDRSTEKLNRELEQM
TEESNRSLAALKAQLEECKEKSRKEITDSQKQAKDCGAEMEKMQFSVGRLQDEVTRLKQA
LQDSQAERDGALLERDVMLQRLRGLEEEVDAKRRSQDDRSRQLKALEEKSKRLEEELEEE
RSTAELLTERVNRSRDQIDQLRAELLQERSSRQDLECDKVSLERQNKELKSRLASSEGMQ
KAGGSISQLEARLEELQDRLQAEEREKSVLHSSNRKLERKVKELTIQIDDERQHVNDQKD
QLSLRVKALKRQVDEAEEEIERLEAARKKAQRELEEQQELNEQLQGRIKALEKEAWRRAA
RAAADSSLQDDALSSDEDLDGAYGPSSIASLLNEANLQTSSC
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctccctgctgtgagtctttgtacacactatggggccatgcctgtccctgtgag
gctgcattcccactatggggccagatctgtcctatggggccatgtcagccatatggagcc
gcatccccccagcactggggagtgcagactgtgggtcccactgtgactctgccctctccc
cagaacagcagcaccgcacccagcatggagcgcacggcggagaagcagagcccggtggat
tacggtgtccagatccgcttcatcaatgacctccaggagcccaagaaggccccgaaggcg
cgcgccaagccgggctcctacggggtggccgtgcgcgtgcagggcatcgcggggcagccc
ttcgtcgtcctcaacagcggtgataaaggtggagattccttcggggtgcagatcaaaagc
gacggctcctaccctgcagggaccaccagccctcggcccccggatccgccccctgagccg
gacctccctgagaacccctatgtgcgcccacagccttcccacagcgtgtcggatgaagag
aacggtgctgcccccgtgcccacacggcacaaaccccgtagcaagatgggggccgagctg
cgccggacgcagtcccatagcaatctgctggctgctgccgatgagcccatggccaccggc
tccaggagcagcagcacgctgagcattgcccaccccacacaccacaaaggctccgggact
ggggtcgcaccctcctcagactcggagagcccagggtcgcggcacgcaggtggtgacatc
gacaccgagccgctctcctcagtgaattcgctcatcagtaaatttgatggcaaagtgccg
cagcgcggccgtgcggcgcggcgatcccgtgtggccccggaggagaggaagcgctcgcag
agcctggacgcccgcagctccgttcctgatggccgcgctgtgggtgccccatccctgttg
cccaccggcgcaggcagaggtggaatggtgaatcgtggcactgaggagcggccgcagagc
aaagcccagacagagctgcagctgaagtcaacgccggatctgctgcgggaccagcaggag
gtggcccagcccagcaacagtgaggaccccaaagagctcatctatgggatcctgaaggag
gggagcagggacagcggcacaatgctgaagaggaaggctgcactggtgctggagaagctg
caggaggcggcggcacccatcaaggggaaggcgtgctcccagccccagcaccacgcgttg
gcccagagggtggaggagctgcaggaaaggttggacgaggagagcaagctccgccagaag
ctggagctgaccaaggagcgcagcaccacgcgggcgctggaggaggcacaggaggagagt
gcacggctgcgggcagcgctggagaagagaatgcaggagctgcagaggagcaccaaggag
ctaggggaggcgaaggcagcacagacgcgagcagaggagcagctgaaagcagtgcgcaca
gatatgggcacggcggtggacgcagacgctctgtacaaggagctggacgagacccgtgag
gagctggaagaggccctgagctcccggcagcggttggaggagcatctgcggcagcgggaa
cgggagctgacggcgctgaaaggggctctgaaggaagaggtagccaaccacgaccgcgag
ctggagcgcgtgcggctgcagtgccacagcgacatggagcagctccggcgcagcgtggag
gacatctcgcagaaccgggccgacctggagtcggagaagcagaaaatcggtgtggtggtg
cgaaacctccagcgtgaactggaggagagtgccgaggagacggggcactggagggagatg
ttccagcggaacaaggacgagctgcgtgctgccaagcaggaactgctgcaggtgaagatg
gagcgtgaggagttcgaggaggagctgcgggagctgcgggagcgcttcacggccacgcgg
gaggaggtggagagggcgcggagcagcgcagttgaccccggagaggtggaagcgctgcgc
acggagctgcgccgggtgcgggaggcacagctggagctggcggaggagaagaagcagcag
gaggaggtagtgaggcagcgggaaaaggagctgcaggcgctgcgcagcactgtgcgggat
gaggcccagagccacagcggagccatggagcagtgccaccgtgacatggaacggctgcgg
gaggagagggacgaggctgtcagggtgaaagtttccctggagggtgagagggaggcagcg
gaggcagcactacggaagctgcaggagcagcacgaggagctgcagaggaaggtgcagggc
atggagacgcagctgaaggactatgagcgcatgggggaaaactgggagggctcccaggca
cggctccgtgagaaggtcaccaaattagaggcagagcgcagacgcgcagaagagtcgttg
ggtgaagctacagaccgtgagcaggagctgctgcgggcgcagcgggcgctggagatgcgt
ctggatgaggcgcagagggggatggcacggctggcacaggagcagcaggagctgagcgcg
tccctccaggacgagcagaggcagaaggagcagctgaagcgtgccaagagcgagctggag
gagcagaagcggctgctggaccgcagcaccgagaaactgaacagagagctggagcagatg
acagaggagtccaaccgctcactggctgcactcaaggctcagctggaggaatgcaaggag
aaatcccgcaaggagatcactgattcccaaaaacaagccaaggactgcggtgccgagatg
gagaagatgcagttcagcgtgggacggctgcaggacgaggtcaccaggctgaagcaggcg
ctgcaggacagccaggcggagcgggacggcgcgctgctggagcgagatgtgatgctgcag
cgcctgcgtggcctcgaggaggaggtggatgccaagaggcgctcccaggacgatcgctcg
cggcagctcaaggcactggaggagaagtccaagcgcctggaggaggagctagaggaggag
cgaagcacggccgagctgctgaccgagcgcgtcaaccgcagccgtgaccagattgaccag
ctgcgtgctgagctgctgcaggagcgctcgagccgccaggacctggagtgtgacaaggtc
tcgctggagcgccagaacaaggagctgaagagccgcctggccagctccgagggcatgcag
aaggcgggcggctccatctcacagctggaggcgcgcctggaggagctgcaggaccggctg
caggccgaggagagggagaagagcgtcctccactcctccaaccgcaagctggagcgcaag
gtgaaggagctgaccatccagatcgacgatgagcggcagcacgtcaacgaccagaaggac
cagctgagcctgcgtgtgaaggcgctgaagcggcaggtggacgaagccgaggaggagatc
gagcggctggaggctgcccgcaagaaggcgcagcgtgagctggaggagcagcaggagctc
aacgagcagctgcagggtcgcatcaaggcactggagaaggaggcctggcgcagagctgcc
cgcgcggccgccgactcctcgctgcaggacgacgcgctgagttccgatgaggacctggat
ggcgcctacgggccctcctccatcgcctcgcttctcaacgaggccaacctgcagaccagc
tcctgctga
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integrated database retrieval system
