Tympanuchus pallidicinctus (lesser prairie-chicken): 128071902
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Entry
128071902 CDS
T08967
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128071902 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128071902 (SNX27)
Membrane trafficking [BR:
tpai04131
]
Protein recycling
Others
Others
128071902 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128071902 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
RA
PDZ
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
RA_3
Motif
Other DBs
NCBI-GeneID:
128071902
NCBI-ProteinID:
XP_052521025
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MADEEGEGPPRSAAAPQRNGGDEGAPGGPRVVRIVKSESGYGFNVRGQVSEGGQLRSING
ELYAPLQHVSAVLGGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTV
LSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAGRQL
CSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVI
GESDIMQEFLSESDENYNGVSDVELRVALPDITTVTVRVKKNSTTDQVYQAVAAKVGMDS
ITANYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEALLND
NDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLNMLRTCEGYNEIIFPHC
SCDSRRKGHVITAISIKHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYAR
GEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKDNQNCSTDTVCSKNVFQT
VRAQQRDAAT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagggtgaagggccgccgcgctcggccgcggccccgcagcggaacggc
ggcgatgaaggagccccggggggaccgcgggtggtccgcatcgtgaaatccgaatccgga
tacggcttcaacgtgcggggtcaagtgagcgagggcgggcagctgcggagcatcaacggc
gagctgtacgcgccgctgcagcacgtcagcgccgtgctgggcgggggggcggccgaccgc
gccggggtccgcaaaggagaccgcatcctggaggtgaacggggtgaacgttgaaggagcg
acacacaagcaggtggtggacctgatccgcgctggggagaaggagctgatcctgacggtg
ctgtcggtgcctccccacgaggccgacaacctcgaccccagcgacgactccctggggcag
tccttctacgactacacggagaagcaggccgtgcccatctccatccccacctacaagcac
gtggagcagaacggagagaagttcgtggtgtacaacgtttacatggctggccggcagctc
tgctccaagcggtaccgtgagtttgccatcctgcaccagaacctgaagcgggaatttgcc
aatttcaccttcccacgtctccctggaaagtggcccttctccctgtcggaacagcagctg
gacgcccggcggcgagggctggaggagtacctggagaaagtgtgctccatccgcgtcatc
ggggagagcgacatcatgcaggagttcctgtcggagtcggatgagaattacaacggcgtc
tcagacgtggagcttcgggtagcattaccagacataacaacagtgacagtcagagtcaaa
aagaacagcactacagaccaggtgtaccaggccgtggctgctaaagttggaatggacagc
attaccgccaactactttgccttgtttgaagtgatcaatcactccttcgtgcgcaagctg
gcacccaatgaatttccccacaaactctacgtgcagaactacacctcggcggtgccgggg
acgtgcctgaccatccggaaatggctcttcacgacagaggaggaggctcttctcaatgac
aacgacttggcagtcacctacttcttccatcaggctgttgatgatgtcaagaaaggctac
atcaaagcagaggagaagtcctaccagctacagaagctctgtgagcagagaaagatggtc
atgtatttgaacatgttgcggacgtgcgagggttacaacgagatcatcttccctcattgc
tcctgtgactctcggcggaagggacatgtcatcacagccatcagtattaagcactttaaa
ctccacgcctgcaccgaggagggacagctggagaaccaggtaatagcgttcgaatgggac
gaaatgcagcggtgggacacggacgaagagggaatggccttttgttttgagtatgcccga
ggagagaagaaaccccgatgggttaaaatcttcaccccctacttcaactacatgcatgag
tgcttcgagcgggtcttctgtgagctcaagtggaggaaagaggtggaggaggaggcaaca
gacaaggataaccagaactgcagcacagacacggtgtgcagcaagaacgtcttccagacg
gtgcgggcacagcagagggacgcagccacttaa
DBGET
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