Tympanuchus pallidicinctus (lesser prairie-chicken): 128071932
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Entry
128071932 CDS
T08967
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128071932 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128071932
NCBI-ProteinID:
XP_052521105
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MLRCVPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEV
SGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLSELILTEN
MLTALPKSLGKLTKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLALLPAELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDESWTDTNLNRVSVIQFLDDPKGDDEDESGAERRGLQRRATPHPSEL
KVMKKVIEVRRSEVCAAKPGTDLNSSSSEEKRLSATSNRSEDSHLSNSTVSADCRAEEQG
EERQRSRPNGQVLEMQELEKEAKPRAEEERKEAVAQEDEDVEVEYNEPTVHFAEDTLIRS
EDEDEDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNTDGVPKEEEEL
GGCNNSAEPEDEEEAWDEDDRKNGSLSAQPSVKGVSFDQANNLLIEPARIEEEELTLTIV
RQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCAE
HHVAVEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPERPEGA
PPKERYSTCLMRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGILHVGDRV
ISINGVDMTEARHDQAVALLTASSPTIVLLVEREAAEQPGEGDAPGAPWVRMHSPPPPPS
HGESPAEEMPSLQRSQLSKGLEDQYPIEEIHLVKAGGPLGLSIVGGSDHSSHPFGIHEPG
VFISKVIPRGLASRSGLRVGDRILEVNSIDLRHATHQEAVNALLSNTQELSVLVRRDPPP
PGMQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGM
RILEVNHQSLLGMTHTEAVQILRSVGDALLVLVCDGFDPKAAAAIEMSPGIIANPFAAGI
GRKNSLESISSIDRDLSPEELEVLQKEMEMVREATQWEREEMEKVEWMRREREAATRQLE
EAAENVTSEPLRMDYRTLAALPSSGSQRVNRTIPESGTGNSRRETPYSPSNQQMPAAARP
GRETRFASINFIASQDDSRSQTKPGVIQPLSRARQNAASHNPEEGDSPNPFQQPEPCSAV
HSSPKPPSPPSPDEIPINVKQAYKTFAAVPLSHPLLETQVPTQSLHSPEQRSFRERQKYF
EVEVKQQQVDKPPKRVSLVGEDDLKKMKEEEARKLQQKRSLLLEEEVEEDEMIKQVPEMS
MQSTVIIEGVEYKIERLNGRSSQAPATRTSEVNENNSSQRNSLEEGMKPEQRTNSMSGLS
PLSLAAGDALAPVRTAKAERRHQERLRMQSPELLSSQEKELSPAERRALEAEKRAMWRAA
RSSTLEDSIKQYEQDLARKLYQSRQWAPAPGARPAQMPSPVQSHASRTPGSGNQSRMKSL
EQDALKAQMVIAKSKEGKKRSTLEQVTESPSPVPTPSPTPLEDCSPRNVTSPGRLSMSEK
KFDYREFAAIPSSKPVYEIQSPDAADDLRYVEDRNNSVPQEQDGQPEEEEMLLTRDSSTP
TASALEEMALYSSKRKLRHSRRSLEAAVPT
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcgtcccgccgctctggcgctgcaaccggcacgtggaggcgctggaccgg
cggcactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgctcgctggag
gagctgctgctggacgccaaccagctccgcgagctgcccaagcctttctttaggcttttg
aacctccgtaagctgggcctgagtgacaatgagatccagagacttccccccgaggtggcc
aacttcatgcagctggtggaactggacatctcccgcaatgacattccagaaattccagaa
agcatcaaattctgcaaatccttggagatcgcagacttcagtgggaatcccctttccagg
cttcctgagggtttcacgcagctgcgcagcctgggccacttggccctgaacgatgtttcc
cttcagagcctccccaacgacatcgggaatctggcaaacctggtgactttggagctacgg
gagaacctgctaaagactctaccaacttcactctcattccttgtcaagttagagcagttg
gatcttggtggcaatgacctggaagtcctgccggataccctgggagcgctgccaaacctg
cgtgagctgtggttggaccgcaaccagctctctgctctgcctccggagctgggcaatctc
cgccgtttggtctgcctggatgtgtcggagaacaagctggagcagctgcccaacgaggtc
agtgggctggtagcactgacggacctgctgctgtcacagaacctgctggagtgcattcca
gatgggatcggtcagctgaagcagctctccatcctcaaggtggaccagaatcggctgaca
gaggtgacggagtcaattggggactgtgaaaacctatcagaactcatcctgacagagaac
atgctgacagccttacccaaatcccttgggaagctaaccaagctgacaaacctgaacgtg
gatcggaaccgtttgacgtcccttccggctgagatcgggggctgtgccaacctgaacgtc
ctgtctctgcgagacaaccgcctggccctgctgccagcagagctcgccaacaccaccgag
ctgcacgtcctggacgtggcaggaaacaggctccagaatttgccctttgctttgacaaat
cttaacctgaaagccttgtggctggcagaaaaccaatcccagcccatgctgaaattccag
acagaggatgatgaaaagacgggagaaaaagttctcacgtgctacctgcttccccagcag
ccctctcctagcctagagaaccttctgcagaacagcgtggatgagagctggacggatacg
aacttaaacagagtcagcgtgattcagttcctggatgaccccaaaggagacgatgaggat
gaatctggagctgagaggcggggcttgcagcgcagggcaacccctcatcccagtgagctg
aaggtgatgaagaaggtgatcgaagttcggcgcagtgaggtctgtgctgcaaaacctggc
acagacctgaattcatccagctcagaagaaaagagactgagtgccacctccaaccgcagc
gaggactcccatctgtccaacagcaccgtctctgctgactgcagggcagaggagcaggga
gaggagaggcagaggagccggccgaatgggcaggtgctggagatgcaggagctggagaag
gaggccaagccaagagctgaagaagagcgtaaggaagcggttgcccaggaggatgaagat
gtggaagtggaatacaatgagcccactgtacactttgctgaggacacactgataaggagt
gaggatgaagatgaagatgaagagcggccgttcccagtggagaaacagaggctcatccgc
aaggatacgccccactataagaaacacttcaagataactaagctgcccaaaccagaggca
gtggtagcactcctgcaggggctgaacactgatggagtccccaaagaagaggaggaactg
ggcggctgcaacaacagcgcggagcctgaggatgaggaggaagcgtgggatgaggatgac
aggaagaacggatctttatctgctcagccatcagtgaagggggtgtcgtttgatcaagcc
aataatctgctgattgaacctgctcgcattgaggaggaagagctgacactgactatcgtg
cggcagacgggggggctgggcatcagcatcgcagggggcaagggctccaccccctataag
ggtgatgacgagggcatctttatttcccgtgtctcagaggagggacctgcagctcgtgca
ggggttcgtgttggggacaagcttctggaggtgaacggagtgtccctgcactgcgcggag
caccacgtggcggtggaagcgctgcgtggctcggggagctccgtgtccatgacggtcctg
agggagcggatggtggaaccggagaacgccatcaccgtcaccccgctgcgccctgaggat
gactacagccctcgagagaggaggggtggcctccgcttccctgagcgacccgagggggca
cctcccaaggagagatactccacctgcttgatgcgcaacgagaagggtctgggcttcagc
attgctggtggcaaaggctccacgccgtaccgggctggtgacacggggattttcatctca
cggattgcagagggaggtgcagcccatcgggacgggatcctgcacgtaggagaccgggtc
atctcgatcaatggggtagacatgacagaagccaggcatgatcaggccgtagcgctgctt
accgcatcctcccccaccatcgtcctgctggtagagagagaggctgcagagcagcccggc
gagggagacgcgcctggcgcgccgtgggtgcgcatgcactccccaccgccaccccccagc
catggggagagcccagcagaggagatgccttcgctgcagaggagccagctctctaaaggc
ctggaggatcagtatcccatcgaggaaattcacctcgtaaaagcaggtggtcctctgggg
ctcagcatcgtgggaggcagcgaccattcgagccacccgtttgggattcatgaaccaggg
gttttcatttcaaaggtcattccccgcgggctggcgtctcgcagtgggctgcgggtaggg
gacaggatcctggaggtgaacagcattgacctgcgccatgccacgcaccaggaggccgtg
aacgctctgctctccaacacccaggagctgagcgtgttagtaaggcgagatccaccaccg
cctggcatgcaggaaatatgcattgaaaaggctccaggagaaaagctgggcatcagcatc
cgaggtggagcaaaaggtcatgctggaaatccatttgatcctactgacgaaggcatcttc
atttctaaggtgagctcctctggggccgcagcgcgggacggccgtctcaaggtggggatg
cggatcctggaggtgaaccatcagagtttgctggggatgacgcacacagaagcagtgcag
atactccgaagtgtgggcgatgctctgctggtgctggtgtgcgatggcttcgatcccaag
gctgcagctgccattgagatgtctccgggaattattgcaaacccttttgctgctggtatt
ggacgcaagaatagcctggaaagtatctcatctattgaccgggatctcagccctgaggag
ctggaggtgctgcagaaggagatggaaatggtgagagaagcgactcagtgggagagagaa
gaaatggagaaagtggagtggatgcgtagggagcgggaggcggccacgcggcagcttgag
gaggcggcagagaatgtcacgagtgaacctttgcgaatggactatcggaccctggctgct
ttgcccagcagtggctcacagagagtcaatcgcactattcctgagtcggggacaggaaat
tcgaggcgagaaaccccctattctcccagtaaccagcagatgcccgcagctgctcggcca
ggcagggagacacgctttgcttccattaacttcattgcatcgcaggatgacagcagatca
cagaccaagccaggcgtcattcagcctctttctcgagcgcgacaaaatgctgcctcgcat
aacccggaggagggggacagccccaatcccttccagcagcccgagccgtgctccgctgtc
cacagctctccaaagccaccatcaccaccctctcctgatgagattcccatcaacgtcaag
caagcatacaagacttttgcagcagtgcccttgtcacaccctctgctcgagacacaggtg
ccgacgcagagcctgcacagccctgagcagcgatccttccgtgagaggcagaaatacttc
gaagtggaggtgaagcagcagcaggtggacaaacctcccaaacgcgtctccttggtggga
gaggatgacctgaagaagatgaaggaagaggaagctcgaaaactgcagcagaaacgtagc
cttctgttggaggaagaagtggaagaggacgagatgataaaacaagtgcctgagatgagc
atgcagtccactgtcatcattgaaggagttgaatacaagattgagaggctgaatggaagg
agcagccaggctccagcaactcggacctcagaggtgaatgagaacaacagctcacagagg
aattcactggaagaaggaatgaagcctgaacagagaacgaactccatgtctgggttgagt
ccattaagccttgcagcaggggatgcgttggccccggtgcgcacagccaaagcggagcgg
cggcaccaggagaggttgcgaatgcagagtcctgagctcctgagcagccaagagaaggaa
ctttctccagcagaacgtcgtgctctggaggcagagaagcgagcgatgtggagggcagca
cgatcctcaactcttgaagacagtattaaacagtacgagcaggatctggccaggaagctg
taccagtcccggcaatgggctcctgctcccggggccaggccagctcagatgcctagtcca
gtgcagagtcacgcctcgagaacccctgggtcaggaaaccaatccaggatgaaatccctt
gaacaggatgctcttaaagcccaaatggtcattgccaagtccaaggagggaaagaagcgc
agcactctggagcaggtgacagagtcaccttcacccgttcctaccccgtcgccaacacca
ctggaagattgcagtcccaggaacgtcacttcaccaggaaggctgtccatgtctgaaaag
aagtttgactaccgggaatttgctgctattccttcctccaaacctgtttacgaaatccag
tctcctgatgcagctgatgacctcagatatgttgaggacagaaataactcagttcctcag
gagcaagacggacagccagaggaggaggaaatgctattaacacgtgattcatcaacgcca
accgcatctgcacttgaagagatggctctgtacagcagcaaacgcaaactgcggcacagc
cggcgcagcctggaggccgccgtcccgacgtag
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integrated database retrieval system