Tympanuchus pallidicinctus (lesser prairie-chicken): 128071960
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Entry
128071960 CDS
T08967
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00260
Glycine, serine and threonine metabolism
tpai00630
Glyoxylate and dicarboxylate metabolism
tpai00670
One carbon pool by folate
tpai01100
Metabolic pathways
tpai01200
Carbon metabolism
tpai01230
Biosynthesis of amino acids
tpai01240
Biosynthesis of cofactors
tpai04981
Folate transport and metabolism
Module
tpai_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128071960 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128071960 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128071960 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128071960 (SHMT2)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128071960 (SHMT2)
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Ortholog
Paralog
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
128071960
NCBI-ProteinID:
XP_052521190
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All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MWPLRVGTALQRCIPRGACSWRAQHGAAMAAPGHAPPPSWTGQESLADSDPEVWGLVQKE
KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQLELLCEQRA
LEAFDLDPQLWGVNVQPYSGSPANFAAYTAVLRPHDRLMGLDLPDGGHLTHGYMTDAKRI
SATSIFFESMPYKLDPATGLIDYAQLEVTARLFRPRIIIAGTSAYARLIDYGRMKKLCEE
LRAFLLADMAHISGLVAAKVVPSPFEHADLVTSTTHKTLRGARSGLIFYRKGVRWVEQKT
GRQTLYDLEDKINFAVFPSLQGGPHNHAIAAVAVALKQAKSPQFRQYCLQVLRNAKAMAR
ALLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDRSALTPGG
LRLGTPALTSRGFGEEDFHKVVEFIDEGIAVALDVKSKTSKLADFQAFLLQDAETQQRLA
ELRQRVESFARAFPMPGFSDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctgcgggtgggcacggccctgcagcgatgcatccctcggggtgcctgcagc
tggagggcgcagcatggagcagcgatggcagcccctggccatgcccccccccccagctgg
acgggacaggagagccttgcagacagcgatcccgaagtttggggtttggtgcagaaggaa
aaggaccggcagtgcagggggttggagctcattgcatccgagaatttctgcagccgtgca
gcactggaagcgttgggctcctgccttaataataagtactcagaggggtacccaggaaag
aggtactacggaggggccgaggtggtggatcagctggaactgctgtgcgagcagcgggcg
ctggaggccttcgacctggacccgcagctgtggggggtgaacgtgcaaccctactccggc
tccccagccaacttcgctgcttacaccgctgtgctgcgaccccacgaccgcctgatgggg
ctggatctgcccgacgggggccacctcacacatggttatatgacggatgctaagaggatc
tcggccacgtccatcttctttgagtccatgccctataagctcgatcctgccacaggtctc
atagattacgctcagctggaggtgacggctcgtctcttccgtccccgcatcatcattgcc
ggcaccagcgcctacgcgaggctcatcgactacgggcgtatgaagaagctgtgtgaggag
ctgcgtgccttcctgctggctgacatggcgcacatcagcggcttggtggctgccaaagtc
gtcccgtcgccctttgagcatgcagacctggtgaccagcaccacgcataagacattgcgc
ggggccaggtctggcctcatcttctaccgcaagggcgtgcgctgggtggagcagaagacg
ggccggcagacgctttacgacctggaggacaaaatcaacttcgccgtcttcccctcgctg
cagggcgggccccacaatcacgccattgccgccgtggccgtggccctcaaacaggccaag
tcgccccagttccggcagtactgcctgcaggtgctgcgcaacgccaaggccatggccagg
gctctgctgcagcgcggctacacgctggtgtcagggggcaccgacaaccacctggtcttg
gtggacctgcggcccaaaggcatcgatggagcccgggctgagcgcgtcctggagcttgtc
tccatcacagccaacaagaacacctgcccaggggaccggagcgccctcacccctgggggg
ctgcgcctggggacacccgcgctgacttcgcgtggcttcggggaggaggacttccataaa
gtggtggagttcatcgacgagggcatcgcggtggccttggatgtgaagagcaaaaccagt
aaacttgcagacttccaggccttcctgctgcaggatgcagagacgcagcagcgcttggcg
gagctccgccaacgcgtggagagcttcgcccgcgccttccccatgcccggcttcagcgac
cactga
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