Tympanuchus pallidicinctus (lesser prairie-chicken): 128071988
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Entry
128071988 CDS
T08967
Symbol
DQX1
Name
(RefSeq) ATP-dependent RNA helicase DQX1 isoform X1
KO
K14433
ATP-dependent helicase [EC:5.6.2.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpai03041
]
128071988 (DQX1)
Spliceosome [BR:
tpai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128071988 (DQX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_19
AAA_22
AAA_16
AAA_25
AAA_11
T2SSE
AAA_30
nSTAND3
Motif
Other DBs
NCBI-GeneID:
128071988
NCBI-ProteinID:
XP_052521254
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MSPHPAGIRVSLCHLPPAPCSGSAMATGGASSSPPRQNGSGSVLEDEEEDEDPALGCDGD
LEVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGSSGIVLVSGPPGTGKSTQVP
QWCADYALSLQFAHGLVACTQPHSLAALSLSLRVADEMDLNLGHEVGYCVPHEDCCTAET
VLRFCSDEMLLREMTSDPLLRQYGVVVLDEAQERTVPTDVLLGLLKDVLHQRPELKVVVV
TSPAMEERLRAFCGDPPVVRVPGAGPSPQLLYRDVPTHGRVAAACQAVLDIHRRQEPGHV
LLFLASEQEITECCRAIQTEAVALNPGLGPLLVLPLHPGVGRAAQKVYEAPEEGGWERRV
VVTHWLGDSSFSLGSVGFVIDTGLELRSVYNPRIRAESQVLRPISRSQAESRMQRAAGSP
RGTCLRLYSEAFYEQRLPPSPAPHVSETSLSRLVLLLKRLDIADMGQCDFLDRPAPESLM
QALEDLDYLAALDDDGNLSEVGIIMSEFPLDPQLAKALIASCEFDCVDEMVSLAAMLTAP
PCFVTPSTRLEEAVTARRRALLHPDGDHFTLINIFNAFQQHDMDEGWCRKHALSSEALRL
AGVVRAELLEVMRRIELPVSPPAFGTDANVLNIQRALISGYFLKVARDIDGSGNYVMLTH
KHVAHLPSSCCYLLRQPPQRLPPWVLYHEFTISQDNCLRVASEIQPQMLVELAPQYYLSN
LPPSESRDLLTELREKVVAAEDVPEAAEPLEEAAGGEGENRDVCALQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccccacaccctgcaggcatcagggtgtccctgtgccacctcccacctgccccttgc
agtggaagcgccatggccaccggcggggcctcgagttccccgccgcggcagaacggctcc
ggttcggtgctggaggatgaggaggaggatgaggacccagccctgggctgcgacggggac
ctggaggtgaatccgtacgatggcctgcccttctcctcacgttactacgagctgctgcgg
cagcggcgggagctgccagtctggaccaccaagtacagcttcatggagcacctggagggc
agcagcggcatcgtgttggtgtctgggccacccggcacaggcaagagtacacaggtcccg
cagtggtgcgccgattacgccctgtccctgcagtttgcacacggcctggtggcctgcacc
caaccccacagcctggccgccctcagcctgtcgctgcgcgtggccgacgagatggacctg
aacctgggccacgaggttggctactgcgtcccccacgaggactgctgcaccgccgagacc
gtcctgaggttctgctcggacgagatgctgctgcgggagatgacgtcggaccccctgctg
cggcagtacggggtggtggtgctggacgaggcccaggagcgcacggtgcccacggatgtg
ctgctggggctgctgaaggacgtcctgcaccagcgcccggagctgaaggtggtggtggtg
acctccccggccatggaggagcggctgcgcgccttctgcggggatccccccgtggtcagg
gtgcccggagccgggccgtccccgcagctgctctacagggatgtcccaacccacggccgc
gtcgcggcagcctgccaggctgtgctggacatccaccggcggcaggagcccggccacgtc
ctcctcttcctggccagcgagcaggagatcactgagtgctgtagggccatccagaccgaa
gccgtggcgctgaacccggggctgggcccgctgctggtgctgcctctgcaccccggcgtg
ggccgtgcggcacagaaggtgtatgaggcaccggaggagggcggctgggagcggcgggtc
gtcgtcacccactggctcggggactcgtccttctccctgggatctgtgggctttgtcatc
gacacggggctggagctgcgcagtgtctacaacccccggatccgcgcagagtcccaggtg
ctgcggcccatcagcaggagccaggcagagtcacgcatgcagcgagctgctggcagcccc
cgaggcacctgcctgcgcctgtactcggaggccttctatgagcagcgcctgcctcccagc
cccgcgccccacgtcagcgagacgagcctcagccgcctcgtgctgctgctgaagcgcctg
gacatcgctgacatgggccagtgcgacttccttgacaggccagcccccgagtcgctgatg
caagcgctggaggacctggactacctggccgccctggatgatgacgggaacctgtcagag
gtggggatcatcatgtcggagttccccctggaccctcagctggccaaagcgctcatcgcc
tcctgcgagttcgactgcgtggacgagatggtcagcctggctgccatgctcacagctccc
ccctgctttgtgactccttccacgcgcctcgaggaggctgtgacggcacgccggcgggcc
ctgctgcacccggatggagaccacttcaccctcatcaacatcttcaatgccttccagcag
cacgacatggatgagggctggtgccgcaaacacgcgttgagcagcgaggcgctgcgcctg
gcgggcgtcgtgcgggcggagctgctggaggtgatgcggcgcatcgagctccccgtctca
ccgccagccttcggcaccgacgccaacgtgctcaacatccagagggcgctcatctcaggc
tacttcctcaaggtggcccgggacatcgacggctccggcaactacgtgatgctgacgcac
aaacacgtggcccacctgccctcctcttgctgctacctgctgcgacagcccccccagcgc
ctccccccctgggtcctctaccacgagttcaccatctcgcaggacaactgcctccgcgtg
gcctcggagatccagccccaaatgctggtggagctggcgccccagtactacctgagcaac
ctgccgcccagcgagagccgcgatctgctcacggagctgcgggagaaggtggtggcggca
gaggacgtccctgaggctgccgagccgctggaggaggcggccgggggggagggtgagaac
cgggacgtctgcgctctgcaatga
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