Tympanuchus pallidicinctus (lesser prairie-chicken): 128072008
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Entry
128072008 CDS
T08967
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128072008 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128072008 (VPS45)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128072008 (VPS45)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
128072008
NCBI-ProteinID:
XP_052521332
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MNAVLAVKQYVSKMIEDSGPGMKVLLMDRETPGAVSMVYTQSEILQKEVYLFERIDSPGR
EPMKHLKAVCFLRPTKENVHCLIQELRRPKYSIYYIYFSNVISKSDIKALAEADEQEVVA
EIQEFYGDYIAVNPHVFSLNLLGCCQGRSWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRVDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVGERNLLEVSEVEQELACH
SDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLMADLKNRGVSERYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKG
KLKDSQYPYLGPNTLRDRPQDIIVFIIGGATYEEALTVYNLNRTNPGVRVVLGGTTIHNT
RSFLEEVTASGFRGRSTEGSHAAPRPSSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgttctcgccgtgaagcagtacgtgtcgaaaatgatcgaggacagcgggccg
ggcatgaaggtgctcctgatggaccgggagacgcccggcgcggtcagcatggtgtacacg
cagtccgagatcctgcagaaggaggtttacctcttcgagcgcatcgactcccccggcagg
gagcccatgaagcacctgaaggccgtctgcttcctgcggcccaccaaggagaacgtgcac
tgcctcattcaggagctgcggaggccgaagtacagcatctattatatctatttcagtaat
gtgatcagtaagagtgatatcaaggcattagctgaggctgatgaacaggaagttgtggca
gaaattcaggagttctatggagattacattgcagtgaatccacacgttttttctctcaac
ctcttgggctgctgccagggtcgcagctgggatccagcccagctgtccaggacaactcaa
gggctgactgctctgcttctgtccctgaagaaatgccccatgattcgataccaactctct
tctgagccagcaaagaggcttgctgaatgtgtgaagcaagtaatcactaaagagtatgag
ctgtttgacttccgtcgcactgaggttcctcctttgctccttattctggaccgctcagac
gatgccatcacccccctgctgaaccagtggacgtaccaggctatggttcatgaattgctg
ggcatcaacaacaaccgcgttgacctctcgcgtgtgccgggcatcagtaaggatctccga
gaggtggtcctgtctgctgagaacgacgagttctacgccaacaacatgtacctgaacttt
gcagagattggcagtaacatcaagaatcttatggaggatttccagaagaggaaacctaag
gagcagcagaagctggaatccatagcagatatgaaggcattcgtggagaactaccctcag
ttcaagaagatgtcaggcacggtgtcaaagcacgtgacggtggtaggagagctctcgcga
ctggttggtgagcgcaacctgctggaggtgtccgaggtggagcaggagctggcctgtcac
agcgaccattccagcgccctccagaatgtgcggcgcctcctgcagaaccccaaggtgact
gagctcgatgctgcccggctggtgatgctctatgccctgcactacgagcggcacagcagc
aacagcctgccagggctgatggcagatctcaagaataggggtgtttctgagagataccga
aagctggtctctgctgttgtggaatatggagggaaacgggtccggggcagcgacctgttc
agtcccaaggatgctgtagccatcacaaaacagttcctcaaaggactgaagggtgttgag
aatgtgtacacacaacaccagcctctccttcaagaaacactggatcagctcatcaaagga
aaactgaaggacagccagtacccctacttgggtcccaacacgctccgtgacaggccccaa
gatattattgttttcatcattggaggggcgacttatgaggaggcactgactgtgtacaac
ctgaaccgcaccaacccgggcgtcagggtcgtcctcggcgggaccaccatccacaacacc
aggagcttccttgaggaggtcacagcttcaggtttccgcggccgaagcaccgagggctcc
cacgccgcgccgaggccgagcagcaggcggtga
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