Tympanuchus pallidicinctus (lesser prairie-chicken): 128072041
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Entry
128072041 CDS
T08967
Symbol
GRIN3B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04020
Calcium signaling pathway
tpai04080
Neuroactive ligand-receptor interaction
tpai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128072041 (GRIN3B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128072041 (GRIN3B)
04082 Neuroactive ligand signaling
128072041 (GRIN3B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128072041 (GRIN3B)
Ion channels [BR:
tpai04040
]
Ligand-gated channels
Glutamate (ionotropic)
128072041 (GRIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
128072041
NCBI-ProteinID:
XP_052521403
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MEGLRALWLLAAALGAAGGHPHPCRGPSRPGPAVRLGALLPSASTGPVRAALSGGGPGAV
LPYNRSLEVVAGRPAARDPASLLRWLCGALLGRGVAAVLAVPRSRRELLQIDFFAAALRV
PFVSVVGSGRAPPFRSQSPFHFHMDRQSSLETLAEVLVSILQAHEWREATLVLCRPWDVT
AFLDRAQLSLHTVLDLRCLHEPRAERCLRQHQEHLGALSGPTLVLGCDLRRARRLFRAAE
RAGLRAQEVCWVLGSPLHAAELQGEGLPGGLLAFGEVGAAPLEAFVRDAVELVSRAISSA
AAVRPDLALNPPMVNCNDHSGDSAESSGRFLTRFLSNTSFHGRTGLVRVQDGTRVQTEQQ
YRVWSLQRDLQGRPAWVTVGTWQHGKLQLEEGAWQSHLQRKAPPEGNGGTRARLRVVTLV
EHPFVFTREVDEDGSCPAGQLCLDPGTNDSAVLDALFEELSAENGSVPREYKKCCYGYCI
DLLERLAEDVPFDFELYIVGDGKYGAWKNGRWTGLVGDLLSGTAHMAVTSFSINSARSKV
IDFTSPFFSTSLGILVRTKDTASPIGAFMWPLHWTTWVGIFVALHMTALFLTLYEWKSPY
GMTPHGRNRMKIFSYSSALNLCYAILFGRTVSSKTPKCCTGRFLMNLWAIFCLLVLSSYT
ANLAAVMVGEKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEEYIKKSFPEMHGHMRRYN
APTTPAGVTMLKTEPPKLNAFIMDKSLLDYEVSIDSDCKLLTVGKPFAIEGYGIGLPQHS
PLTSKLSEFISRYKSAGFMDLLHDKWYRMVPCGKRVFAVTETLQMGIYHFSGLFVLLCIG
LGGALLTSLGEHAFYRLILPRIRRQKRFSYWLHTSQKIHRALNMGTEEQRRQKLSLEQRR
SPQQNPAPERKEVRRVRFQLDTSEEPPGPPSNGLVQGERAGGERELQELEEKIEAMREQL
RAALLRKSELVSALGTTRGPGAEQSQEHSCTVKAAE
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggaggggctgcgggcgctgtggctgctggcggccgcgctgggggctgcggggggacac
ccgcatccctgccgcggtccgagccggcccggccccgccgtgcgtctgggagcgctgctg
ccctccgcctccaccggccccgtccgcgccgctctgtccggtgggggtcccggggcggtg
ctgccgtacaaccgcagcctggaggtggtggcgggccgtccggcggcgcgggatccggcc
tcgctgttgcggtggctgtgcggggctctgctggggcgaggcgtggcggcggtgctggcc
gtgccgcgatcccgccgcgagctgctccagatcgacttcttcgccgcggctctgcgcgtt
cccttcgtcagcgtcgtcggcagcggccgcgctccgccgttccgctctcagagccccttc
cacttccacatggaccggcagagctcgctggagacgttggcagaggtgctggtgagcatc
ctgcaggcccacgagtggcgcgaggccacgctggtgctgtgccgcccctgggatgtcacc
gccttcctcgaccgtgcacagctctccctgcacactgtgctggatctccgctgcctgcat
gagcccagggctgagcggtgcctccggcagcaccaggagcacctgggagccctctccggc
cccacgttggtgctgggctgcgacttgcggcgcgcacggcggctcttcagggcggcggag
cgtgcggggctgcgggcgcaggaggtttgctgggtgctgggctccccgctgcacgccgcc
gagttgcagggtgaggggctgcccggggggctgctggcctttggggaggtgggcgctgca
ccgctggaggcctttgtgcgtgacgcagtggagttggtgagccgtgccatcagcagtgct
gccgctgtgcgtcccgacctcgcgctcaacccccccatggtgaactgcaacgaccacagc
ggggacagcgctgagtcctcagggcgcttcctgacccggttcctatccaacacatctttc
cacgggcggacggggttggtgcgggtgcaggacgggacgcgggtgcagacggagcagcag
taccgcgtgtggagccttcagcgcgacctgcagggacggcctgcctgggtgacagtgggc
acgtggcagcacggcaagctgcagctggaggagggcgcgtggcagagccacctccagcgc
aaagcacccccagaagggaacggcggcactcgtgcgcggctgcgggtggtgacgctggtg
gagcatcccttcgtcttcacacgagaggtggatgaggatgggagctgccccgccgggcag
ctctgcctggaccccggcaccaatgactcggccgtgctggatgctctctttgaggagctg
agcgctgagaacggctctgtgccgcgggagtacaagaagtgctgctacgggtactgcatc
gacctgctggagcggctggccgaggacgtgccctttgacttcgagctctacattgtgggc
gatgggaaatacggagcgtggaagaacgggcgctggacggggctggtgggggacctgctc
agcggcacggcccacatggccgtcacctccttcagcatcaattcagcacgcagcaaagtc
atcgacttcaccagccccttcttctccaccagcctgggcatcctggtgaggaccaaggac
acggcgtcgcccatcggggccttcatgtggcccctgcactggaccacgtgggtgggcatc
ttcgtggccctgcacatgaccgcactcttcctcaccctttacgagtggaagagcccctac
ggaatgaccccccacggccgcaaccgcatgaagatcttctcctactcctcagccctcaac
ctctgctacgccatcctctttgggcgcaccgtctccagcaagacgcccaagtgctgcacc
ggccgcttcctcatgaacctctgggccatcttctgcctcctggtgctctccagctacacg
gccaacctggcggccgtcatggtgggcgagaagaccttcgaggagctctcgggcatccac
gaccccaagctgcaccacccctcgcagggtttccgctttggcaccgtatgggagagcagt
gccgaggagtacatcaagaagagcttccccgaaatgcacgggcacatgaggcgttacaat
gcccccaccacccccgccggtgtcaccatgctcaagacggaaccccccaagctcaacgcc
ttcatcatggataagtccctgctggactacgaggtgtccatcgactccgactgcaagctg
ctcaccgtagggaagccttttgccattgaaggctacggcatcggcctcccccaacactca
ccgctgacctccaagctgtcagagttcatcagtcgctacaaatcagccggtttcatggac
ctgctgcacgacaagtggtaccgcatggtgccctgcggcaagcgcgtcttcgctgtcact
gagaccctgcagatggggatctaccatttctcggggctgtttgtgctgctgtgcatcggg
ctgggcggggcgttgctcacctcgctgggggagcacgccttctatcgcctcatcctgccc
cgcatccgccgccagaagcggttcagctactggctgcacaccagccagaaaatccaccgc
gctctcaacatgggcacggaagagcagaggaggcagaagctgagcctggagcagaggcgc
agcccccagcagaacccggcacccgaacggaaggaggtgcgcagggtgcgctttcagctg
gacaccagcgaggagcccccagggcctcccagcaacgggttggtgcagggggagcgggca
gggggcgagagggagctgcaggagctggaggagaagatcgaggcgatgcgggagcagctg
cgtgcggcgctgctgaggaagagcgagttggtgtcagcgctgggtacaacgaggggccca
ggagcggagcaaagccaggagcacagctgcactgtgaaagcggcggagtag
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integrated database retrieval system
