Tympanuchus pallidicinctus (lesser prairie-chicken): 128072108
Help
Entry
128072108 CDS
T08967
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128072108 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128072108 (VCAM1)
04090 CD molecules [BR:
tpai04090
]
128072108 (VCAM1)
04091 Lectins [BR:
tpai04091
]
128072108 (VCAM1)
Cell adhesion molecules [BR:
tpai04515
]
Immunoglobulin superfamily
VCAM
128072108 (VCAM1)
CD molecules [BR:
tpai04090
]
Proteins
128072108 (VCAM1)
Lectins [BR:
tpai04091
]
I-type lectins (Siglecs)
128072108 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
ICAM_N
C2-set
C2-set_2
ICAM1_3_5_D2
DUF2808
Ig_6
C1-set
REJ
Receptor_2B4
Ig_VEGFR-1-like_5th
Ape1_N
Syndecan
Adhes-Ig_like
PepSY_2
SpaA_4
Motif
Other DBs
NCBI-GeneID:
128072108
NCBI-ProteinID:
XP_052521526
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MLKQMGRTSQTVLIILYVLITVKAFEMEVIPADRVVAQIGETLILTCNTTGCALPKFSWR
TQMDYPLGGKVYNDKTYSTLTMSPVSAENNNDYLCTVICNKEKKEKSVKVELYSFPSDPV
IKTTASLVVGETATVICKVHDVFPSDHLELLLKKEEHILHSKTFEGDVCTKAETKTVAYS
FNLTTEDNGKEITCVARLQIAGMDFEPNERSTSLKLNANFGPQNTFISASPGNLSMEGHS
LKLTCVTESNPPAQVFWRKHLAKETIQHFVENNVLSIPHAHFTDSGQYICEVINPVTNKT
EKATVNIVIQAPPKNTTLTVFPSSSVKEGESVTISCTATGVPAVQIILEKKIGGVITTLK
AEDGKYTIEKAELKDAGKYECTFTNKFGNRSLDVELDVKVPPQNITVLVYPSENVKEGEN
ITIVCSTYSNPPSQMILKKVNQEKEIILPVANGTFTLYNVTKNDTGRYVLDVFNEVGSNI
KVIEIAVVGKLEKPDQIMPLIIAFSCVTAVAIPVVAILIYVSRKAKINGSYSLVKALRLK
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacagatgggaagaacaagccaaactgtgctaattattttgtatgtattaata
actgttaaagcttttgaaatggaagttataccagctgacagagttgttgcacagattgga
gaaacactgatactcacatgcaatactactggctgtgcattaccaaagttttcatggaga
acccaaatggactacccccttggaggaaaagtatacaacgacaagacatactctacctta
actatgagtccagttagtgctgaaaataataatgattatttatgtactgtcatctgcaat
aaagagaaaaaagagaagagtgtcaaagttgaactttactcttttcccagtgatcctgtc
attaagaccactgcatctttagttgttggagaaactgccactgtcatctgtaaagtacat
gatgtgtttccttctgatcacctggaattactcctaaagaaagaggaacatattcttcat
agcaaaacttttgaaggagatgtctgcacaaaagcagaaaccaagactgtggcatactca
tttaacctcacgactgaagacaatggtaaagagattacttgtgtggccagattacaaatt
gctggtatggactttgagcccaatgaaaggtcgacttctttgaaactgaatgcaaacttt
ggtccacaaaatactttcattagtgcatctccaggaaacttatcaatggaaggacactct
ctgaaacttacttgtgtgactgagagtaatccaccagcacaagtattttggagaaaacat
ctggcaaaggaaaccattcagcatttcgtagaaaacaatgttctttctattcctcatgcc
catttcactgactcaggacagtatatctgtgaagtaattaatcctgtaactaataaaacc
gagaaagcaactgtgaacattgttatacaagctccaccaaaaaatacaacactaacggtt
ttcccatcgagttcagtgaaagaaggagaaagtgttaccatctcttgcacagctacaggt
gtcccagctgttcagattatcctagaaaagaaaataggtggtgtgatcacaacccttaaa
gcagaagatggcaaatacaccatagagaaggctgagctaaaggatgcaggaaaatatgag
tgcacattcactaacaaatttggaaatcgttctctagatgtagaacttgatgtcaaagtt
cctcctcagaatattactgtgttagtttatccatcggaaaatgttaaagaaggagaaaat
atcacaattgtgtgcagcacatacagtaacccaccatcacagatgatcctgaaaaaggtt
aatcaagagaaagaaataattctaccagtagccaatggaacctttacactctacaatgtc
accaaaaatgatacaggcagatatgtgcttgatgttttcaatgaggttggaagcaacatc
aaagtgatagagatagctgttgtaggaaaactggaaaaaccagatcaaattatgcccctg
attattgcattctcctgtgtaacagcagtagctatacctgtggttgcaattttgatctac
gtgtcaagaaaagcaaagataaatggatcctacagtcttgttaaagcattgaggctgaaa
gtgtga
DBGET
integrated database retrieval system
