Tympanuchus pallidicinctus (lesser prairie-chicken): 128072338
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Entry
128072338 CDS
T08967
Symbol
NR5A2
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2 isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128072338 (NR5A2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tpai03310
]
128072338 (NR5A2)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
128072338 (NR5A2)
Nuclear receptors [BR:
tpai03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
128072338 (NR5A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128072338
NCBI-ProteinID:
XP_052521967
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All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MMSSSSHTAIIQESIKHGLTSVGAGAADRHGAPSPARSRPVMLPKVETEALGLARSNGEQ
GQMPENMQVSQFKMVNYSYDEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKR
YTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAVRADRMRGGRNKFGPMYKRDRALK
QQKKALIRANGLKLEAMTQVIQAMPTDLTISSAIQNIHSASKGLPLNHTALPPTDYDRSP
FVTSPISMTMPPHGSLQGYQTYGHFPSRAIKSEYPDPYTSSPESIMGYSYMDGYQTSSPA
SIPHLILELLKCEPDEPQVQAKIMAYLQQEQANRSKHEKLNTFGLMCKMADQTLFSIVEW
ARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSILLVTGQQVDYSVIASQ
AGATLNNLMSHAQELVAKLRSLQFDLREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNA
ALLDYTMCNYPQQTDKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPCNNLLIEMLHAK
RA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttctagttctcacacggccatcatacaggaatctataaaacatggacttaca
tcagtcggtgccggtgccgcggacagacacggagcccccagcccggcccgcagccgccct
gtcatgctgcccaaagtggagacggaggccctgggactcgcccggtcgaatggggaacag
gggcagatgccagaaaacatgcaagtgtctcagtttaaaatggtgaattactcttacgac
gaagacctggaggagctgtgtccggtgtgcggagataaagtgtcggggtaccactacggg
ctgctcacctgcgagagctgcaagggattctttaagcggacggtgcagaataacaagagg
tacacgtgtatagagaaccagaactgccagattgacaaaacccagaggaagcgatgccct
tactgccgatttcaaaaatgcctcagtgttggaatgaaactagaagccgtgcgagctgac
cgaatgcgcggcggcagaaacaagtttggaccgatgtacaagagagacagggcgctgaag
cagcagaagaaagctctcatccgagcaaacggacttaaactggaagccatgactcaggtg
atccaagctatgccaaccgacctgacaatatcttctgcgattcagaacatccattctgcc
tccaagggcctacctctgaaccatactgccttgcctcctacagactatgaccgaagcccc
tttgtaacctctccaattagtatgacgatgccaccccacggcagcttgcaaggttaccaa
acgtatggccacttcccaagccgtgctatcaagtccgagtaccccgacccttacactagc
tcaccagagtcaataatgggctactcatacatggatggttatcaaacaagctcaccagca
agtattccgcatctgatattggaactcctgaaatgtgagccagacgaaccgcaagtccaa
gctaagatcatggcttatctgcagcaagagcaagccaacagaagcaaacacgagaagctc
aacacgtttgggctcatgtgtaaaatggctgaccaaaccttattctccatcgtcgagtgg
gctaggagtagcatcttttttagagaacttaaggttgatgaccaaatgaagttgcttcag
aactgctggagtgaactcttaattctagatcacatttaccggcaagtggtacacgggaaa
gaaggctccatccttctggttaccgggcaacaagtagattattccgtaatagcatcacaa
gctggagccaccctcaacaaccttatgagccacgcacaagaactagtagcaaagcttcgt
tccctgcagtttgatctacgagaatttgtatgtctcaaattcctggtgctgtttagttta
gatgtcaaaaatctagagaacttccagcttgtggagggtgttcaggaacaagtgaatgct
gctctgctggactacacgatgtgtaattacccacagcaaacagacaaatttgggcagctt
ctcctgcgactaccagaaatccgggccatcagtatgcaggcagaagaatacctctactat
aaacacctgaacggagatgttccatgtaataaccttctcattgagatgctgcatgcaaag
agagcataa
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