Tympanuchus pallidicinctus (lesser prairie-chicken): 128072523
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Entry
128072523 CDS
T08967
Symbol
CACNA1E
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128072523 (CACNA1E)
04020 Calcium signaling pathway
128072523 (CACNA1E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128072523 (CACNA1E)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128072523 (CACNA1E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128072523
NCBI-ProteinID:
XP_052522334
LinkDB
All DBs
Position
Unknown
AA seq
2426 aa
AA seq
DB search
MLGLSTCSVSAPGRVAEPAASPHYALALPEEEMWREHRLALMHSTQSCNLLEPQSLAEVL
VSRAASFDALYQPRDANGDSGSALDLGLGTYVPISPDVIKRRRGGLIEQRDIIKAHEAHK
MQSTPQARRKEWEMARFGEAVAGRLGSGDGGSEQNRSRQGATAPAGGSPGAFKQTKAQRA
RTMALYNPIPVRQNCFTVNRSLFLFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLA
LEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIV
VLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLL
LFFAILMFAIIGLEFYSGKLHRACYTNNSGELEELDPPHPCGVQGCPPGYECREWIGPND
GITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVL
GVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNAGTSAL
EVLRRATIKRNRTDAMNRDSSDEHCVDISSVGERRLAQRRPLHPTLGNPLSRSGLKGVDG
ASYLRHKERLLRISVRHMVKSQVFYWIVLSLVALNTACVAIVHHNQPAWLTHFLYYAEFL
FLGLFLLEMSLKMYGMGPRLYFHSSFNCFDCGVTVGSIFEVVWAIFRPGTSFGISVLRAL
RLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGGFNFIDG
TPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVRSGMWSSIYFIVLTLFGNYTL
LNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNMPAIERDRRRRH
HMSMWEPRSSHLRERRRRHHMSVWEQRTSQLRRHMQMSSQEGINKDEPPLINPHASIFRR
KKPGDGVALEKCDEEQGGKGERPPAEGPEQPAPGTNPGGGEDRRSPSPRARRDKEMWQHK
TCHGNCEPGEEGAGGGIEERARMRQSQRRSRHRKARMEGKEPTGALESRTGSQEMGLEEP
CPAEGMQDGERRGDAAAALDLIQGEMDASGDPTRTNGAPNEEGSLPASAPEPPRGMEGSL
GEQDCSSPDTSEQALLGGAALGASRTVSHSEPDLSSVTANTEKATESTTIMIDVQDSTVV
QISNKTDGEASPLKEAESKEDEEEMEKKKRKKEKSETGKAMVPHSSMFIFSTTNPVRRAC
HYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSDRNKVLRYFDYVFTGVFTFEMVIKMI
DQGLILQDGSYFRDLWNILDFIVVVGALVAFALANALGTNKGRDIKTIKSLRVLRVLRPL
KTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTE
KDCIGNYVDHEKNKMEVKCREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTE
EDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERAC
IDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTY
ELALKYLNIAFTMVFSLECVLKIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDTKLVN
TSSFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGM
QVFGNIKLDEESHINRHNNFRSFLGSLMLLFRSATGEAWQEIMLSCLEGKGCEPDTTATS
GQNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVR
IWAEYDRAACSGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHF
TSTLMALIRTALDIKIAKGGADWQQLDSELQKEILTIWPHLSQKMLDLLVPMPKTSDLTV
GKIYAAMMIMDYYKQSKAKKQRQQLEEQKNAPMFQRMEPSSLPQEIISNAKALPYLQQDT
LTGLSSRSGFPSLSPLSPQEIFQLACMDPAQGQFQEHQSLEPEVREFQRVQPSNRGSYLP
VDTQDHAVSGRASSMPRLTVDPQVVTDTSSMRRSFSTIRDKRTNTSWLDEFSMERSSDNT
YKSRRRSYHSSLQLSARRLNADSGHRSEGHRSGGRERGRSKERKHLLSPDISRCNSEERS
PQAHDESPERRRESRSPSEGRSQTPNRQGTGSLSESSIPSISDTSTPRRGRRQLPPVPPK
PRPLLSYASMLRHAAGDASPPPDETEGGSPLLSKEPNAAGLTESSSSPAGKPSRPSTPQR
YISEPYLALHDDSHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHSWQMPNGHYRRR
RRGAGQGVMCGASIDVLSDTEEDDKC
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgctcggactcagcacatgctccgtcagcgccccgggcagggtggctgagccggccgca
tccccccactacgcactggccctgcctgaagaggagatgtggcgcgagcaccgactcgcc
ctgatgcacagcacccagtcctgcaacctgctggagccccagagcctggccgaggtgctg
gtctcacgtgcagccagcttcgatgccctctaccaaccccgagatgccaacggtgacagc
ggcagcgccttggacctggggcttggcacctacgtccccatcagccccgacgtcatcaag
cgccgtcggggagggctgatcgagcagagggacatcatcaaggcacacgaggcacacaag
atgcagagcacgccgcaggcaaggaggaaggagtgggagatggctcgcttcggggaggcg
gtggctggcaggctgggctccggggatgggggctccgagcagaaccgcagccggcaagga
gctactgctccggcaggagggtctccgggagctttcaagcaaaccaaagcgcagcgagcc
cggactatggctctgtacaaccccatccctgtccggcagaactgcttcaccgtcaacaga
tcattgtttctctttggggaagataacatagtcaggaaatacgccaagaagctcatcgac
tggcctccctttgagtatatgatcctggcaaccatcattgccaactgcatcgtgctggcc
ctggagcagcacctcccagaggacgacaagacacccatgtcacggagactggagaaaacg
gagccatacttcattgggattttctgctttgaggctgggattaagatcgtggctctgggc
tttgttttccacaagggctcatacctgcgcaatggctggaacgtcatggacttcatcgtg
gtcctcagtggcatccttgccaccgctggaacacacttcaacacgcacgtggacctgcgc
accctgcgggctgtgcgtgtgctcaggcctctgaagctcgtctcgggcattcccagcctt
cagattgtgctgaaatccatcatgaaggccatggtgcctctcctccagatcggcttgctg
ctcttttttgctattctcatgtttgccatcatcggcctggagttttacagtgggaaactg
caccgagcctgctacacaaacaattcaggtgagctggaggagctggaccctccccacccc
tgcggggtgcagggttgtccgccgggctatgagtgccgagagtggatcggtcccaatgat
gggatcacgcagttcgacaacatcctcttcgctgtgctgaccgtcttccagtgcatcacc
atggaagggtggaccacagttctgtacaataccaatgatgccttaggagccacctggaac
tggctatacttcatccccctcatcatcattggatccttctttgtcctcaaccttgtcctg
ggagtgctgtcaggtgagtttgccaaagaacgtgagcgcgtggagaaccgccgggccttc
atgaagctgcgacgacagcagcagatcgaacgggagctcaacggctaccgggcctggata
gacaaagcggaggaagtcatgctggctgaagagaacaaaaacgctgggacctcagcctta
gaagtgctcagacgagccaccatcaagaggaaccggacagatgccatgaaccgtgactcc
agcgatgagcactgcgtcgatatctcctccgtgggcgagcggaggctggcacagaggagg
cctcttcatcccaccttgggtaaccctctgagtcgctctggtctcaaaggagtggatgga
gcctcttatttacggcacaaggagcggctcctgcgtatctccgttcgccacatggtgaaa
tcccaggtcttctactggattgtcttgagcctggtggctcttaacactgcctgtgtggcc
atcgtccatcacaaccagccggcctggctcacacacttcctctactatgcagagttcctg
tttcttgggctctttctcctggagatgtccttgaagatgtatgggatggggccacgcctg
tacttccattcttcattcaactgctttgactgtggggtcacagtgggaagcatctttgaa
gtggtttgggccatcttccgaccggggacctcttttgggatcagtgtcctacgagccctt
cgtctcctgcgaatatttaaaataaccaagtactgggcatccttgaggaatttggtggtc
tcactgatgagctccatgaagtctattatcagcctgctcttcttgctcttcctctttatt
gtagtctttgccctgctgggaatgcagctgtttggaggggggttcaatttcatcgatggg
acaccatcggccaactttgacactttccctgcggccatcatgacggtgttccagatcttg
actggtgaggattggaacgaggtgatgtacaacggcatccgctcccagggaggcgttcgc
tcgggcatgtggtcctccatctatttcatcgtcctcaccttgtttgggaactatactctg
ctgaatgtcttcttggccattgcagtggacaacctggctaatgctcaggagctcaccaag
gatgagcaggaggaagaggaggcctttaaccagaagcatgcccttcagaaagccaaggaa
gtcagccccatgtctgcccccaatatgcctgctattgaaagagacaggcgcaggagacac
cacatgtcgatgtgggagccacgcagcagccacctgcgggagcggcgccggaggcaccac
atgtcggtgtgggagcagcgcaccagccagttgcgccggcacatgcagatgtctagccag
gagggcatcaataaggatgagccacccctcatcaacccacatgccagcatcttccgccgc
aagaaaccaggggacggtgttgccttggagaagtgcgatgaggagcaaggtggcaaggga
gagcggcctccagctgagggtcccgagcagccggccccgggaaccaacccaggaggtggg
gaggacaggaggagcccatcgccccgtgccaggagggacaaggagatgtggcaacacaaa
acgtgccatgggaactgcgagccgggtgaggaaggggcaggaggtggcatcgaggagagg
gcgcggatgaggcaaagccagcggcgcagccggcatcgaaaagccaggatggaggggaag
gagccgactggagccctggagagccgaacaggtagccaggagatggggctggaggagccc
tgccccgcagaggggatgcaggatggggagcggcgtggggatgctgccgcagcactggac
ctgattcagggcgagatggatgcgagtggggaccccaccaggaccaatggggctccaaac
gaggagggaagcctcccagcatcagcccctgagccccctcgggggatggagggcagcctg
ggcgagcaggactgcagcagcccagacaccagtgagcaggccttgcttgggggggcagca
ctgggggccagccgcactgtcagccacagcgagcctgacctgtcctccgtcactgccaac
accgaaaaggccactgagagcaccaccatcatgattgatgtccaagactccactgtggta
cagattagcaacaagaccgatggagaagccagccccttgaaggaggctgagagcaaagag
gatgaggaggagatggagaagaagaagcggaagaaggagaagagcgagacaggcaaagcg
atggtgccacacagctccatgttcatcttcagcaccacaaacccggtgcgcagagcctgc
cactacatcgtgaacctgcgctacttcgagatgtgcatcctgctggtcatcgccgccagc
agcatcgccctcgcggctgaggatcccgtcctcaccaactccgaccgtaacaaagtgctg
aggtattttgactatgttttcactggtgtgttcaccttcgagatggttatcaagatgatc
gatcagggcttgatcctgcaggatggctcctacttccgagatctctggaacatcttagat
ttcatcgtggtggtgggagctctggtggccttcgccttggcgaatgctttggggaccaac
aagggtcgggatatcaagaccatcaagtctctccgtgtgctgcgggtcttgaggcccctg
aaaaccatcaagcggctgccaaagctcaaggctgtcttcgactgcgttgtgacatccctc
aagaacgttttcaacatcctcattgtctacaagctcttcatgttcatctttgctgtcatt
gctgtccagctcttcaaggggaagtttttctactgcactgacagctctaaggacacagag
aaggactgcatagggaactacgtggaccatgagaagaacaagatggaggtgaagtgccgg
gagtggaaacgacatgagtttcactatgacaatataatctgggcgttgctcaccttgttc
acagtctccactggcgagggctggccccaggtgctgcagcattcggtggacgtgacggag
gaggaccgtgggcccagccgcagtaaccgcatggagatgtccattttttacgttgtctat
tttgtggtcttccctttcttcttcgtcaacatttttgtggctctcatcatcatcacattc
caagagcaaggagacaaaatgatggaggagtgcagtctggagaagaatgagagggcctgt
attgactttgccatcagtgccaagcccctcacacgctacatgccccagaaccggcacacc
ttccagtaccgggtctggcactttgtggtctccccatcctttgagtataccatcatggcc
atgattgctttgaacactgtggtgctgatgatgaagtactactctgctccatacacctat
gagctggccctgaagtacctgaacatcgctttcaccatggtgttctctttggagtgcgtc
cttaagatcattgcttttggctttctgaattatttccgggacacctggaatatctttgac
ttcatcactgtcattggcagcatcacagagatcatcctgacggacaccaagctggtgaac
accagcagcttcaacatgagtttcctgaagctcttccgggcggctcggctcatcaagctg
ctgcgccagggttacaccatccgcatcctgctgtggacatttgtgcagtccttcaaggct
ctgccctatgtctgcctcctaatcgcgatgcttttcttcatctatgccatcattgggatg
caggtttttggcaacatcaaactagatgaggaaagccacattaaccggcacaacaacttc
cgcagcttcctgggctccctcatgctcctcttcaggagtgccaccggtgaggcatggcag
gagatcatgctctcctgcctggaaggcaagggctgtgagccagacacgacggcaacatcc
gggcagaatgagaacgagcgctgtggcaccgacttggcctacgtctattttgtctccttc
atcttcttctgctcgttcctgatgctcaacctgtttgtggcagtcatcatggacaatttt
gagtacctgacacgagattcctccatcctgggacctcaccatctagatgaatttgtccgg
atctgggcagagtatgacagagcagcgtgcagtggccgaatccattacactgagatgtat
gaaatgctgactcttatgtcaccaccgctaggcctcggcaagagatgtccttccaaagtg
gcctataagagactggtgctgatgaacatgcccgtggctgaggacatgaccgtccatttc
acctccaccctgatggcgctgatacgcaccgccctggacatcaaaattgccaaaggtggt
gcagattggcagcagttagactctgagcttcaaaaggagatcctgaccatttggcctcac
ctgtcccagaagatgctcgacctgttggtacccatgccaaaaacctctgacctgactgtt
ggcaaaatatatgcagccatgatgattatggattactacaagcagagcaaggcgaagaaa
cagaggcagcagctggaggagcagaaaaacgcacccatgttccagcgcatggagccatcc
tctttgccacaggaaatcatctccaacgcaaaggctctgccttacctccagcaggacact
ctcacagggctgagcagccggagcgggttcccctcgctgagcccactctcaccacaggag
atcttccagctggcgtgcatggatccagcccaggggcagttccaggagcaccagtctctg
gagccagaggttagggagtttcaaagagtgcagccctctaaccgtggcagctaccttccc
gtggacactcaggaccacgctgtctctgggagggcctcctccatgcctcgtctcactgtg
gatccccaggtggtgacggacaccagctcgatgcggcggtcgttttccaccatccgggac
aaacgcaccaacacctcctggctggatgagttctccatggagcgcagcagcgacaacacc
tacaagtcccgccggcgcagctaccactcctcgctccagctctctgcccggcgcctcaac
gctgactcaggccacaggtccgaggggcaccgctcgggtggcagggagcggggccgatcc
aaagagcgcaagcacttgctgtcccctgacatctcccgctgcaactcagaggagaggagt
ccccaggcacacgatgagtctccagagcggcggcgcgagtcccggtcccccagcgagggc
aggtcacaaacgcccaacaggcagggaacgggctccctgagtgaaagctccatcccctcc
atctcggacaccagcacaccccggcgaggccgccgccagctcccaccggtgcccccaaaa
ccacgtcccctcctctcctacgcctccatgctgcggcacgccgccggagacgcctcacca
cctcccgacgagaccgaaggggggtccccgctcctctccaaggagcccaacgccgccggc
ctgaccgagtcttccagctccccagcggggaagccgagccggccatccaccccgcagcgt
tacatctcggagccctacctggccctgcacgacgactcgcacgcctcggactgcggcgag
gaggagacgctcaccttcgaggcggccgtggccaccagcctgggtcgttccaacaccatt
ggctcagccccaccgctgcggcacagctggcagatgcccaacgggcactaccggaggcgg
aggcgaggggctgggcagggtgtgatgtgcggggccagcatagatgtgctcagcgacacc
gaggaagatgacaagtgctag
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integrated database retrieval system
