Tympanuchus pallidicinctus (lesser prairie-chicken): 128072674
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Entry
128072674 CDS
T08967
Symbol
CLCA2
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-activated chloride channel regulator 2
KO
K05028
calcium-activated chloride channel regulator 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128072674 (CLCA2)
Ion channels [BR:
tpai04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
128072674 (CLCA2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLCA
VWA
Motif
Other DBs
NCBI-GeneID:
128072674
NCBI-ProteinID:
XP_052522669
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All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MATLGSPWSRIFSRLNSSSSQPDLTGEPFPQQRLGSSALSQKSSDACGLLAGFGSPISVP
DPRRTERREGAGHRHPPXGGCRAGRGGGSTADARLVLLRPQLLCRGRXGGMSGGAAAGAA
LLALALAAAGEGAAVLRDGGYDGLLAAVHPRVPEDSRLIARLQEMITEASSYLFNATKGR
VYFRSVKILIPPTWKEKGYEKPKHETYEKADVIVAAPYWKHGDDPYTLQHEACGKMGKYI
HFTPNFLANDYVTDIYGSRGRTFVHEWAHLRWGVFDEYDNDRPFYVTGQNQVKVTRCSSD
LTGIYVCEKNSCTDGSCVINKLTGLFKEGCAFIPERNQTAVSSIMYMQSLSSVAEFCNEH
NHNREAPNLQNRMCDYRSTWEVIKNSTDFENDLPLTSSSLISPPSFSLLQKRDRVICLVL
DVSKTIAGGNWIIRLHQAAELYLLQIVEENTYVGIVTFSDKGEIKTHVHQIVSDEARKQL
ASYLPTAPGGKRANVCAGLRLACEVIRKKEGHLYGSEIILVTGGQDNSTGRCFSEVINGG
SVIHTITVGSSAAKEIEHFSKETGGFKFFVPERLDFSDLLDVFSGITSRSGDTFHQSVQI
ESAVESVAGYRQLRRTVTIDSTVGRETFFVATWQAAEPPEIILIDPIGRSYTIKDFELDS
VFHIARLQIPGTAETGDWAYTLINVYLAPQVLTMTVTSRAANSTLPTVSVKTYMSKDATY
YPSAMVVYVQISQGFSPILGANVTAIFSSENGDMVSLELLDNGAGSDIIKNDGIYSKYLF
SFSGNGRYSLKVHVQANRTTVPQTAMPWSHAMYIPGYVENGKLKMNPSRPPAIKNNIQVR
RGGFSRTAVGDSFTVSAVPIAPYIDVFPPCKIIDLDARMEDDKVILSWTAPGDDFDEGQA
SSYEIRTSETPLELRDSFYNTTFVNTTTLSPQRAGCTEIFVFKPEAFTTGNITVIYVAIR
AVDEVFLISELSNIAQAVMFIPPMAYTPSNLKFGVSTILLLFFVLLTAVCLTVSTSLCLV
NKKKKKNLSENTAKLLQHKV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggccactctcgggtctccctggagtcgtatcttctccaggctgaacagctccagctct
cagcctgacctgacaggggagccctttcctcagcagcggttggggtcatcagcactgagc
caaaagagttctgatgcttgtgggctgctggcgggctttggctctccgatttcagtgcca
gacccgcgtcggacagaacgccgggaaggcgccgggcaccgacacccgcccngggggggt
tgcagggcaggcaggggaggagggagtacggcagacgcccgcctcgtcctcctacgcccg
cagctcttgtgccggggaaggncgggcggcatgagcggcggagcggcggcgggggctgcg
ctgctggccctggcgctggcggcagcaggggagggggcggcggtgctgcgggacggcggt
tacgatgggctgctcgccgccgtgcatccccgcgtgccggaggacagccggctcatcgca
cgcctccaggagatgatcacggaggcttcctcttatctgttcaatgctacaaaaggcaga
gtctatttcagaagcgtaaagattctgatacctccgacgtggaaagagaaaggttatgag
aaaccaaaacacgagacctatgaaaaggcagatgtcatagtggcagctccttattggaag
catggcgatgatccatacaccttgcaacatgaagcttgtggaaaaatgggaaaatacatc
catttcacacctaacttcttagcaaacgattatgtgacagacatctatggctcacggggc
agaacctttgtacatgagtgggcccaccttcgttggggggtctttgatgagtatgacaat
gacagaccattctatgtcactggacagaatcaggttaaagttacaagatgttcctctgat
cttactggaatctatgtctgtgaaaaaaactcctgcactgatggtagttgtgtcattaat
aagctaacaggactttttaaggaaggatgtgcatttattcctgagaggaatcagactgca
gtatcttcaataatgtatatgcagagtttatcatctgtggcagaattctgtaatgagcat
aatcataacagagaagcacccaatttgcagaatcgaatgtgtgactacagaagcacatgg
gaagtaattaaaaactctacagattttgaaaatgatcttccattgaccagcagcagcctt
attagtcctccctctttctcactgcttcagaagagagacagagtcatctgtttagttctt
gatgtttccaagactatagctgggggtaactggatcattagattgcatcaagcagcagaa
ctgtatttactgcaaattgtggaagaaaacacttatgttggtattgtcacattcagtgac
aaaggagagatcaaaactcacgtgcaccagatagtcagcgacgaagcacggaaacagctt
gcttcatatctccctacagctccaggggggaagagggcaaatgtttgcgcaggcctgagg
ctggcatgtgaggtcattaggaagaaagaaggacatctgtatggatctgaaattatactg
gtgacaggtggacaggacaatagtacaggcaggtgtttttccgaagtgattaatggtgga
tcagtcatccataccattactgttgggtcctcagctgctaaggaaatcgaacacttctcc
aaagagacaggaggatttaagttttttgtcccagaaaggctggacttcagtgacttactg
gatgttttctctggaattacgtccagaagtggagacacattccatcaatctgttcagatt
gaaagtgctgttgaaagtgttgcagggtacagacaactcaggaggacagtgactattgat
agcactgtgggacgagaaaccttctttgtagccacatggcaagctgctgaaccaccagaa
atcatcctgattgacccgatcggaagaagctacaccatcaaggactttgaattagattca
gtattccacatagctcgcctccagattccaggaactgcagagacaggagactgggcatac
acactgataaatgtttacctggctcctcaagttctgacaatgacagtaacttctcgagca
gcaaattctactctacccactgtgtctgtgaaaacctatatgagtaaagatgcaacttac
tatcccagtgccatggttgtctatgtacagattagtcaaggcttttcccctattcttggg
gcaaatgtaactgccattttcagttcagagaatggagatatggtttccttggaacttctg
gacaatggagcaggttctgacattattaagaatgatggcatctattccaagtacttgttt
tctttctctgggaatggaagatacagcctaaaagttcacgtccaagctaacaggactact
gtgccacagactgcaatgccatggagtcatgccatgtatataccaggttatgtagaaaat
ggtaaactcaagatgaacccatcaagacccccagctattaaaaataatattcaggtcaga
agaggaggtttttctagaacagctgtgggagactctttcacagtatctgcagttccaata
gcaccttatattgatgtttttccaccatgtaaaattattgaccttgatgccagaatggaa
gatgataaagtcattctatcatggactgcaccaggagatgattttgacgaaggccaagcc
tcaagttatgaaatcagaacaagtgagactcctctggaattaagagacagcttctataac
actacatttgtgaatactaccactctatcacctcagcgtgctggctgcacagaaatattt
gtgtttaaaccagaagcttttacaacagggaacataactgtaatctatgttgcaatacgt
gctgtggatgaagtttttcttatctctgagctatctaatattgcacaagcagtaatgttt
attcctccaatggcatataccccttctaatttgaagtttggtgtttcaacaatattgtta
ctattctttgtattattaacagcagtgtgtctaacagtaagtacaagcctttgtttagta
aacaaaaagaagaaaaagaatctttcagaaaatacagctaagctgcttcaacataaagtg
taa
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