Tympanuchus pallidicinctus (lesser prairie-chicken): 128072680
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Entry
128072680 CDS
T08967
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128072680 (FUBP1)
03041 Spliceosome [BR:
tpai03041
]
128072680 (FUBP1)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128072680 (FUBP1)
Spliceosome [BR:
tpai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128072680 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
128072680
NCBI-ProteinID:
XP_052522698
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MADYSTVPPPASGAPGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSMNSNDYGYGG
QKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMT
EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR
LLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI
QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI
PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDL
LRSVQAGNPGGPGGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS
ISQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHG
PHGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPP
NPPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQV
DYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPA
PQCLPRPSTLGSAAKKQQTFNHH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgcctcctcctgcttcaggcgcacccgggggaggcggcggt
ggaggtggaggagtgaacgatgcctttaaagacgcgctgcagagagctaggcagattgca
gcaaaaattggaggagatgctggtacatccatgaattctaatgactacggttatggagga
caaaaaagacctcttgaggatggagatggctcttggacaagtccgagcagtacaacacac
tgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgctcctcag
aatgactcttttggaaatcagttaccaccaatgcaccaacaacaaaggtctgtgatgacg
gaggagtacaaagttccagatggaatggttggattcatcattggcagaggtggagagcag
atctcacgcatacagcaagagtcaggatgtaaaatacagattgcacctgacagtgggggc
ctgcctgaaagatcatgcatgctaactggaaccccagaatctgttcaatcagcaaaaaga
ttacttgatcaaatagttgaaaagggaagacctgcacctggctttcatcatggtgatgga
cctggaaacgcagtccaagaaattatgattccagcaagtaaagcaggactagttattggt
aaaggtggagagacaattaagcaattacaggagcgagcaggtgtcaaaatggtcatgatt
caagatggcccacagaacactggtgctgacaagccccttagaataactggagacccttat
aaagttcaacaagccaaggaaatggtgctggagttaattcgtgatcaaggtggctttaga
gaggtgcgcaacgaatacgggtcacgaataggaggaaatgaagggatagacgttccaata
ccacggtttgctgtaggtattgtaattggaagaaatggagagatgataaaaaagatacag
aatgatgctggtgttaggatccaatttaagccagatgatggaacaactcctgatagaata
gcccaaatcacagggcctcctgacagatgtcagcatgctgcagaaattattacagatctc
cttcgaagtgttcaggctggtaaccctggtggcccaggaggacctggtggtagaggaagg
ggtagaggtcaaggcaactggaacatggggccccctggtggattacaggaattcaatttt
attgttcccactggcaaaactggactaatcattggcaaaggtggtgaaactattaaaagc
ataagccagcagtctggtgctagaatagaacttcaaagaaatcctcctcctaatgcagat
ccaaacatgaagatgtttactatccgtggaacaccccagcaaatagattatgcacggcaa
cttatagaagaaaagattggaggtcccgtaaatccattgggtcctcctgttccccatgga
ccccatggtgttgttcctggccctcacggacctcctgggccaccaggccctggtgctccc
atgggaccatataacccagctccttataatccagggcctcctggcccagcacctcatggt
cctccagctccgtatgctccacaaggatggggaaatgcttatccgcactggcagccacca
aacccaccagatccaggtaagccaggaacagatcctaattcagcagcatgggcagcttat
tatgctcactattatcagcagcaagcacagccaccacctgcagcccctcctggtggacca
gctacaacccaaaccaatggacaaggagatcagccaaacccagcaccagcagggcaggtt
gactatacaaaggcatgggaggaatactacaaaaaaatgggtcaagcagttcctgcgcct
gctggagctccgccaggtggtcagccggattacagcgcagcatgggctgagtactacagg
cagcaggcagcatattatgcccagacaagtccccagggaatgccacaacatcctccagca
ccacagtgccttcccagaccttccaccttaggttctgctgcaaaaaagcaacagacattt
aatcatcactga
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