KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128072720
Entry
128072720         CDS       T08967                                 
Symbol
PATJ
Name
(RefSeq) inaD-like protein isoform X1
  KO
K06092  InaD-like protein
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04530  Tight junction
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128072720 (PATJ)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 L27_2 MPDZ_u10 DUF6604
Other DBs
NCBI-GeneID: 128072720
NCBI-ProteinID: XP_052522758
LinkDB
Position
Unknown
AA seq 1875 aa
MPENPAADKQQVLQIIDRLQAKLREKRDVQHNENLSVLRSTLRSPLFNQILTLQQSIKQL
KDQLNYMPPDRSVDFDFTKRGLLVFADKSVTAGNVCKQSSLPEPRASTFIPNLGVNEFNT
IIQQMAKGRQIESIKIEKPSVGGLGFSVVTLKNHNSGEVGIFVKEVQPGSVADRDQRLKE
NDHILAINCTPLDQNISHQHAIALLQQSTGSLHLVVAREPVQGNSRTSPVSLSDTNPPGT
IRWGHVENVELINDGSGLGFGIVGGKLSGVVVRTIVPGGLADRDGRLRTGDHILQIGGTN
VQGMSSEQVAQVLRNCGNSVRMVVARDPKCEITESPPAPASWPVSALPPFQNGNDNTALF
ETHDVELIKKNGQSLGITIVGYAGACDVAESSGIFVKNIIPGSAADHNGQIHVHDKIVAV
DGVNIQDFTNQEVVETLRNTGQVVRLTLLRRRPSTVSSERCSDKVLPSVPALASSGALGT
ETNVDSRNEENQKQKGRDPFPPAYDLKSKWENLLGPEYEVMVVNVDMPITDDSELQKYSK
LLPIHTLRLGVELDTFDGHHYISSIASDGPAATLGLLQLEDELLEVNGVQLYGKSRREAI
TFLKEVPPPFTMVCCRRLFDDGSESLVDEPTARVPSPEQKVKPEENINPEEEEEGELALW
SPDVKIIELEKDKNGLGFSILDYQDPLDPTRTAIVISSLVAGGVAERGGELLPGDRLVFV
NEKYLDSTTLKEAVEVLKSVPPGRVSLGICKPLVGESKEENVHSMDTSNMKTSPGSPESR
DNTNFSIILEAPQGFRDETPFKEEAVDEPILDLGRSFQLSQNDSGYEKESWEMREFWKPT
TEEVDEEREMLVDEYEEDLDFVKYSSSDRQKASSEKNLNTEWAEQLQTAKIQDLRSSANL
SPKQSLEYTFNREQMYEENANVTSQSSGTMAHRDYQKGLLDSGATQSGSRNKMDLGTKLH
MDSKVPGFTVDLEGVEKEEGEDYMFSKNEKSVRVTTLPQPRTVLYSELPEREEGEGEETP
NFSHWGPPRTVEIFRDPHVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGRTRA
LKTGDKILEVSGIDLQNATHEEAVEAIKNAGNPVVFVVQSLSNVPKVVSAIHPKGIKVSK
DQDANKESKSEKRKYGAPPPMKLPPPYRALERLHSEEASVDEEEEEDACAEKKIRQRYAD
LPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPDGPAGRDGRMHIGDELLEINN
QILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQMAVTPFPLPTSTHPSIEDHSCTETP
SSEEDPSLDVVMKSLSDEEPSKADVKYKADKPVLVDQLEVEEQLPENVLKQMKQSKSSAK
VSANLQEISLVSAPTYLSPDTEITNRNILPPPLPVDPATCPIVPGQEMTIEISKGRSGLG
LSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGIDLRNANHEEAITALRQT
PQKVQLVVYRDEAHYKDEENLEIFHVDIQKKTGRGLGLSIAGKRNGSGVFISDIVKGGAA
DVDGRLIQGDQILSVNGEDMRNASQETVATILKCAQGLVHLELGRLRAGSWLSSRKTSQN
SQVSQQSAHSHFHPALAPVLSTLQNFVSTKRSSADVSQRNSVGADTGPRTVEITRGPNDA
LGISIAGGKGSPLGDIPIFIAMIQASGVAARTQRLRVGDRIVSLNGQPLDGLSHADAVNL
LKNAYGSIILQVVADTNISAIATQLESMSAGCNVNSSSEHASEDPEAPQPKIITLEKGSD
GLGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQILAVNGEALEGVTHEQAVA
ILKRQKGTVTLSVLS
NT seq 5628 nt   +upstreamnt  +downstreamnt
atgcctgaaaaccctgctgcagataaacagcaggtgctgcagatcattgaccgtctgcaa
gcaaaactgcgtgagaagagagatgtccaacataatgagaacctgtctgttctgcgcagc
acgctcaggagccctttgtttaaccagatactgaccctccagcaatccatcaagcaactg
aaagatcaactcaattatatgccacctgaccggtcagtggattttgattttactaagaga
ggactgctggtatttgctgacaaatcagttactgctggaaatgtgtgtaaacagagcagt
ttaccagaacccagagcatctaccttcattccaaacctgggggttaatgagttcaataca
atcatccaacagatggcaaaggggagacaaatagaatcaataaagattgaaaagccttct
gtcggaggtctcggatttagtgttgttacccttaaaaatcacaactcgggagaagttggt
atctttgtcaaagaagttcagccaggaagcgtggctgacagggatcaaagactaaaggaa
aatgaccacatactggccattaattgcaccccattggatcagaacatttctcatcagcac
gctattgctctcctccagcaatccacaggatctttgcatctggttgttgctagggagcca
gttcaaggaaacagcagaacttcgcctgtctcactgagtgatacaaatccacctgggact
attcgttggggccacgttgaaaacgttgagctgattaacgatggctcgggattaggcttt
ggaattgtaggaggaaagctgagtggtgtagttgtaagaaccattgttcctggaggatta
gcagatcgggatgggaggctgcgaactggagatcacatcttacagattggagggaccaac
gtgcagggaatgagcagcgagcaagtcgcccaagtgctgagaaactgtgggaattccgtt
aggatggttgttgcgagagacccaaagtgtgaaattacggagagtccaccagctcctgcg
agctggccagtcagtgcactgcctccatttcagaatggaaatgataatactgctcttttt
gagacccatgatgttgaacttataaaaaagaacgggcaaagcctggggataacaattgtt
gggtatgctggcgcatgcgatgtagcagaatcttcagggatttttgtgaaaaacataata
cctggcagcgctgctgaccacaatggccaaattcacgttcatgacaaaattgttgctgtt
gatggagttaatatacaggattttaccaaccaagaagtggtagagacgctgcgtaacacc
gggcaggttgtacgcctcaccttgctcaggaggaggccttccactgtttcttcagaaaga
tgttcagataaagtgctgccaagtgttccagctttagcatcttctggagctttagggact
gaaactaatgtggacagtaggaatgaggaaaaccaaaaacagaagggaagagacccattc
cctcctgcatatgatctaaagtccaagtgggaaaacctgctgggccctgaatatgaagtt
atggttgtgaacgtggatatgcccattacagatgactcagaactgcagaagtactcaaag
ctattacccatccatactttgagattaggagttgagcttgacacgtttgatggacatcat
tacatatcatcaattgcttcagatggtcctgctgcaacacttggtcttctgcaactggag
gatgaacttctagaggtcaatggagttcagctgtatggcaaatcacgccgtgaggcgatc
acctttctaaaagaagtgccacctccgtttacaatggtttgctgtcggcgactttttgat
gatggcagtgagtctcttgtggatgaacccactgcgagggttccatctccagaacaaaag
gtgaaacctgaagaaaacattaatcctgaggaagaagaagaaggggaattagcgttatgg
tctcctgatgtgaaaattattgaactggagaaagacaaaaacggtttaggattcagcatt
ttagactaccaggatcccctggatccaacaagaacagccattgtgatcagctctttggtg
gcaggtggagtagctgaacgtggtggtgagcttctacccggtgaccgcttggtatttgta
aatgagaaatatttagacagcacaactttaaaggaggcagtagaggtgttgaaatctgtg
cccccaggaagagtttctcttggaatctgcaaaccgttggtgggagaaagcaaagaggag
aacgtgcatagtatggataccagcaacatgaaaaccagccccggatctccagagtcaaga
gataataccaatttctcaataatccttgaagcaccacagggtttcagagatgaaacacct
tttaaagaagaagctgttgatgaaccaattttggacttgggaaggtcatttcagctttct
caaaatgacagtggatatgagaaggagtcctgggagatgcgtgaattctggaaacccaca
acagaagaagtggatgaagaaagggaaatgttggtggatgagtatgaagaagatttagac
ttcgtgaaatatagctcatcagatagacagaaggcatcttcagagaagaacctgaataca
gaatgggcagagcaacttcagacagctaaaatacaagacttaagatctagtgccaactta
agtccaaagcagtccctggaatatacattcaatagggagcagatgtatgaagaaaatgct
aatgtaacttcacagtcttctggaaccatggcacacagggactaccaaaaaggcctattg
gacagtggagctacccagtcaggatcaagaaacaaaatggatttaggtacaaagcttcat
atggactctaaagtacccggtttcactgttgacctagaaggtgttgaaaaggaagaaggg
gaggattacatgttttccaagaatgaaaaatctgtgagagtgaccaccttacctcagcct
agaacagttttgtacagtgaattacctgaaagagaagaaggagaaggtgaagaaactcca
aacttcagccactggggaccacctcggactgttgaaatcttcagagatcctcatgtgtct
cttggaataagtattgttggtggacaaactgtcataaagcgcctaaagaatggagaagaa
cttaaagggatctttatcaaacaagttttggaagacagcccagcaggaagaacaagagct
ttaaaaactggagataaaatacttgaggtttctgggatagatctacaaaatgccacgcac
gaagaagcagtagaagctatcaagaatgcaggaaatcctgttgtgtttgtagttcagagt
ttgtctaacgtaccaaaagtggtttctgccatacatcctaagggaatcaaagtcagcaaa
gatcaggatgcaaacaaagaaagtaagagtgaaaagagaaagtatggggccccacctcca
atgaaactgccacctccctacagagcacttgaaaggctgcactcggaggaagccagcgtg
gatgaagaggaggaggaggatgcttgtgcagagaaaaagatcaggcaacgatatgcagat
ctaccaggagagctgcacattattgagcttgagaaagacaaaaatgggcttgggctgagc
cttgctggcaacaaggaccgatctcgtatgagcatctttgtagttggtatcaatccagat
ggacctgcaggacgggatggaaggatgcatattggtgatgaacttctagagataaacaat
cagatattgtatggaagaagtcatcagaatgcttctgcaataattaagactgccccatca
aaggtcaagctagttttcatacgaaatgaagatgcagtcaatcagatggctgttactcct
tttccattgcctaccagcacccacccttctattgaggatcacagctgcactgaaacccca
agcagtgaagaagacccaagcttggacgttgtcatgaaaagcctgtctgatgaggagcct
agcaaagctgatgtgaagtataaagctgacaaaccggtgttggtggatcagttggaagta
gaggagcagctgccagaaaatgtccttaaacagatgaaacaatccaaatcttcagcaaaa
gtatcagccaacttgcaggagatatccctggtgtcagcacctacttatctctctccagac
acagaaatcacaaaccgcaatatcttaccacctccattgcccgtggatccagcgacttgt
cctattgttcctgggcaggagatgactatagagatatctaagggtcgatcaggacttgga
ctcagcattgttggagggaaagacaccccactggatgccatcgtgatccatgaagtttat
gaagaaggggcggcagccagggatggcaggctgtgggctggagaccagatccttgaggtg
aacgggatcgatctgcggaacgccaaccacgaggaagccatcactgcgctgagacagaca
cctcagaaggtgcagttggttgtttatagagatgaagctcattacaaagatgaggaaaac
ttagagatcttccacgtagatattcagaagaaaacaggccgaggactggggctcagcata
gctggaaaacgaaatggaagtggagtgtttatctctgacattgttaaaggaggagctgca
gacgtagatggaagattaattcaaggagatcagattttgtcagttaatggagaggatatg
agaaatgcctcacaagagactgttgccactatacttaagtgtgcccaaggcctggtgcat
ctcgagctggggaggctgagagctggatcgtggctgtcatcacggaaaacatcccagaac
agtcaggtgagccagcagagtgcccacagccacttccaccccgcactcgctccggtcctc
tccacgttgcagaactttgtcagcacaaaaagatcttcagcagacgtgtctcaaagaaac
tcagtaggggcagatacgggcccaaggactgtggagataacaaggggaccaaacgatgct
cttggtatcagcatagcaggaggaaaggggagtccattaggagatattcccatcttcatt
gctatgattcaggctagcggtgtggcagcacggacccaaagactcagagttggagatcgg
attgtcagtcttaatgggcaacctttggatgggctgtcgcatgcagatgctgttaatcta
ctaaagaatgcttatgggagcattatcctgcaggtcgtggctgataccaacatcagtgcc
attgctacccaactggagagcatgtctgcaggatgcaatgtcaactcttcttctgagcat
gcttctgaagatccagaagcacctcagcctaagattattactttggagaaaggctctgat
ggactgggatttagtattgtgggggggtatggaagtccccatggagacctgcccatttat
gtcaagactatatttgccaagggagcagctgcggacgatggcagactgaagcgcggcgat
cagattttagcagttaatggggaagctttggaaggtgttacccatgagcaagctgtagct
attctgaagcgccagaaaggaactgtgacattatcggtgttatcatga

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