Tympanuchus pallidicinctus (lesser prairie-chicken): 128072735
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Entry
128072735 CDS
T08967
Symbol
DNAJC6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128072735 (DNAJC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpai03041
]
128072735 (DNAJC6)
03110 Chaperones and folding catalysts [BR:
tpai03110
]
128072735 (DNAJC6)
04131 Membrane trafficking [BR:
tpai04131
]
128072735 (DNAJC6)
Spliceosome [BR:
tpai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128072735 (DNAJC6)
Chaperones and folding catalysts [BR:
tpai03110
]
Heat shock proteins
HSP40 / DNAJ
128072735 (DNAJC6)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
128072735 (DNAJC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
128072735
NCBI-ProteinID:
XP_052522807
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MSLLGGYRKKPGGDGYESLQLVESGAEGGGGGPGAVGAGGRSPARQQQQQHRADGSTMDS
SGASSPDMESSYGGGLLDMVKGGAGRLFSNLKDNLKDTLKDTSSKVMQSVASYTKGELDI
SYITSRIIVMSFPAEGVELGFRNHIEDVRTFLDSRHPDHYTVFNLSPKYYRSAKFHNRVS
ECSWPVRQAPSLHNLFAVCKNMHNWLQQNPKNVCVIHCMDGRAASAVLVSAMFCFCHLFS
NPGPAMQLLNTKRPGIVLWPSHRRYIGYICDLIADKPVIPHCKPLTIKSVTLSPVPCFNK
QRNGCRPFCDILSGETRILTTSQEYERMKEYRVQEGKVLIPLGATVHGDVVVSVYHMRST
IGGRLQAKMTNTQIFQIQFHTGFIALGTTTLKFTKPELDACDSPDKYPQLFHVILEIEIQ
STDRQTELTPPWENFTTKDINPTILFSSHQEHQDTLALAGKGPTDSPQDNIRNVGQSAFF
SSLSWQDQKSDKSSSHPTSEDRAALVHEESEQSDDELLSLSSQHSNASGDKPHGTPKHGK
KQQELPAPPPPEDVDLLGLDGSPMSKTFPSQPAAAPSNSDLLSDLFGVGGPGSQGQSTQP
AADEVFHMAGPGSVQSTPRHSAASASPSPSPRVGEASAFDPFGSSPKQAGPDLLGSFLSS
SNVPGDPFLQATRSPSPTVHSDPFHMASSTPTVSIQPDVSGGWDWPNKPGGLGMGSKSAA
TSPTGSLHSTPTHQPKPQTLDPFADLGTLGASLAGGPSFASKPTTPTGMGGGFPPSPQKP
SPQPMGSSWQQGAGYGWQQAQPKAQPAMPHASPQNKPNYNVSFSAMPGAQNERGKGPANA
DSKPKVSADFEDLLSGQGFNAHKDKKGPKTIAEMRKEEMAKEMDPEKLKILEWIEGKERN
IRALLSTMHTVLWAGETKWKPVSMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKM
IFMELNDAWSEFESQGQKPLY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcggcggctaccgcaagaaacccggaggtgacggttatgaatctttgcag
ctggtggagagcggcgctgagggaggcggcggtgggcccggcgcggtgggggcgggcggc
cggagccccgcgcggcagcagcagcagcagcaccgcgccgacggcagcaccatggacagc
tccggtgcctcatcaccggacatggagtccagctatgggggaggcttgctggatatggtg
aaaggaggagcagggaggctgttcagcaatctgaaggataacctaaaggatactctgaaa
gatacgtcttcgaaggtcatgcaatctgttgccagttacaccaagggagagctagatatt
tcatacattacctcgagaatcatagtgatgtcttttccggctgaaggcgttgagctggga
ttcaggaaccacattgaagatgtccggacatttctggattccagacaccctgaccactac
acagtcttcaatttgtcacccaagtactatcgcagtgccaagtttcacaacagggtatct
gaatgtagctggccggtacgacaggcgcccagtctgcacaatctctttgctgtctgcaag
aacatgcataactggctacagcagaaccccaaaaacgtgtgtgtcatccactgtatggat
ggccgtgcagcctcagcagttctggtcagcgcgatgttctgtttctgtcacctcttctct
aacccaggccctgctatgcagctgctgaacacaaagagacctggaattgtactgtggcca
tctcacaggagatacataggatacatttgcgatctaatagcagacaagcccgtcattcct
cactgcaagcctctgactatcaagtcagtcaccctcagcccagtcccctgtttcaacaag
caaagaaatggctgccggcccttctgcgacatcctcagtggagaaaccagaatcctgacc
acatcccaagagtatgagaggatgaaagaataccgtgtgcaagaagggaaagtcctgatt
ccactgggagccactgtccacggagatgttgttgtttccgtctaccatatgaggtcaacc
atagggggacgccttcaagcaaaaatgaccaacacgcaaatattccaaattcaatttcat
actggatttatagccctgggaacaaccacattaaaattcaccaaacctgaactggatgcc
tgtgactctccagacaaatatccccagcttttccatgttatactggagatagaaatacaa
tctactgatagacaaacagagttaactcctccgtgggagaacttcacaacaaaagacatc
aatccaaccattctcttctcctctcatcaggagcatcaggacactcttgctttggcaggt
aaaggtcccactgattcaccccaggataacatcaggaatgttggacagagtgcattcttc
tcatctctcagctggcaagatcagaaatctgacaaaagtagctctcaccccacctcagag
gaccgagcagcattggtgcacgaggaaagcgaacagtcagatgatgaactcttgtccctt
tccagtcaacacagcaatgccagcggtgacaaaccccacgggacgccaaaacatggcaaa
aagcagcaagagctgccggcaccgcctccgcctgaggacgtggacctgctggggctggat
ggcagccccatgagcaaaacctttccctcgcagccggcggctgcaccctctaactcggac
ttgctgagcgatctgtttggggttggcgggccgggatcccaggggcagagcacacagcct
gctgccgatgaggtctttcacatggcggggcccggatcggtgcagtccacccctcggcat
tccgcggcctcggcgtccccgtccccatccccgagggtgggagaagcatctgcctttgat
ccatttggaagcagccctaagcaagccggtccagacctcctgggttcctttctcagttca
tcaaatgtccccggtgatcctttccttcaggcaacaagaagtccttcaccaactgtgcac
agcgatcccttccacatggcttctagcacaccaacagtttccatacagccagatgtttcg
ggtggctgggactggcccaacaaaccaggtggcttaggtatgggaagtaagtcggctgcc
accagtcctacaggatccctccacagcactcccactcaccagcctaaaccccaaacactg
gatccatttgctgacctggggactcttggagcaagtttagcaggtggcccttcgtttgcc
agtaagccaaccacgccgacgggaatgggcggaggattccccccctcaccacagaagccc
tctccgcagcccatgggcagcagctggcagcagggagctggctatggctggcagcaggca
cagcccaaggcccagccagccatgccccatgcctcaccccagaacaagcccaactacaac
gtgagtttctcagcaatgccaggagcgcagaatgaacgtggaaaaggaccagctaatgct
gattcaaaacctaaagtgtctgcagattttgaagatctgttatctggccaaggttttaat
gctcataaggacaagaagggacccaaaacaatagctgagatgagaaaagaagaaatggct
aaggagatggaccctgaaaaactgaaaatcctggagtggattgaaggaaaggagagaaat
ataagagccctgctgtccacaatgcataccgtcctatgggcaggggagaccaagtggaaa
cctgtaagcatggcagatcttgtaactccagagcaagtgaagaaggtctaccgacgggca
gtgcttgtcgttcaccctgacaaggctactgggcagccatacgaacaatatgcaaagatg
atatttatggagctaaatgatgcctggtcagaatttgaaagccaaggacagaaacccttg
tattag
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