Tympanuchus pallidicinctus (lesser prairie-chicken): 128072821
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Entry
128072821 CDS
T08967
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128072821 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128072821 (NRXN1)
Membrane trafficking [BR:
tpai04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
128072821 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
128072821
NCBI-ProteinID:
XP_052523012
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MGAALVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLSDMAVNDNLWHAVVIRR
HFKNTTLIIDRAEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQTSPVESQEVRLDDEQSRLCAREDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEEDNYVEGLAHLMMGDQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTL
QRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRN
LRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFM
GCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPK
WNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLD
MGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDDLYL
GGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRE
TAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCEREATILSYDGSMFMKIQLPVVM
HTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDCIRINCNSSKGP
ETLFAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLEFHNIETGIITER
RYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKASY
VALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLI
KGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQSTAGARNLDLKSDLYIGGVAKEM
YKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCANQ
GVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRPSTRADRLAIG
FSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGTDDIAIEEINAIINDGKYHVV
RFTRSGGNATLQVDNWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTI
FNSQATIKIGGKERGHPFQGQLSGLYYNGLKVLNMAAENDANIVIEGNVRLVGEVPSSMT
TESTATAMQSEMSTSVMETTTTLATSTARRGKAPTKEPIGQTTDDILVASAECPSDDEDI
DPCEPSSGGLANPTRAGGGREYPGSSEVIRESSSTTGMVVGIVAAAALCILILLYAMYKY
RNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSSNKNKKNKDKEYYV
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggcgctggtgcggcgcgggggctgcctgctgctctggctggccctgctgctg
ggctgctgggctgagctgggcagcgggctggagtttccaggggccgaggggcagtggacc
aggttccccaagtggaatgcctgctgcgagagcgagatgagcttcaacatgaagacgcgc
agctccagtgggctggtgctctactttgatgatgagggcttctgtgacttcctggagctc
atccttacccaaggtgggcggctacagctcagtttctccatcttctgtgctgagcctgcc
accttgctctctgatatggcggtcaacgacaacctttggcatgccgtggtcatccgccgc
cacttcaagaacaccactctgatcattgaccgggctgaggcgaagtgggtggaggtgaag
tccaagcggcgggacatgactgtgttcagtggcctcttcttggggggactcccgccggag
ctgcggtcggcgactctaaagctgacactctcctctgtcaaggaccgggagcccttcaag
ggctggataacagatgttcgggtcaactacacacagacttcgccggtggagagccaggag
gtgcggctggatgatgagcagagccgcctgtgtgctcgggaggatgtttgcctcaacgga
ggtgtctgctcggtgctcaacgaccaggctgtctgcgactgctcccaaacgggctttcgg
gggaaggactgcagtgaagaagacaactatgtggaaggtctggcgcacctgatgatgggc
gaccaaggaaaagaagaatatattgcaacgttcaagggatcagaatacttctgctatgat
ttatctcagaatcctatacagagcagcagtgatgaaataactctatcatttaaaacactt
cagagaaatggactgatgcttcacacaggaaaatcggctgattatgtcaatcttgcactg
aagaacggagctgtctccttggtcattaatttgggctcaggggcctttgaagcactggtg
gaacctgtgaatgggaaatttaatgacaatgcctggcatgatgtgaaagtaaccaggaat
ctgcgtcagcactcaggcattggacacgctatggtgacaatatcagtggatggaattctg
accactacgggatacacacaagaagactacaccatgctgggctctgatgactttttctat
gttggtggcagtcctagcacagcagacctcccggggtcaccagtcagtaacaactttatg
ggctgtctcaaagaggttgtatataaaaataatgatgtcaggttggagttatctcgactt
gccaagcaaggagatcctaagatgaagattcatggggtagtagcgtttaaatgtgagaat
gttgcaaccttagatccgatcacatttgaaacaccagagtctttcatttctttgccaaag
tggaatgccaagaaaacaggctcaatatcatttgactttcgtacaactgagccaaatggt
ttgattcttttcagtcatggaaagccaaggcaccaaaaggatgccaaacacccacagatg
gtgaaagttgacttttttgccattgagatgcttgatggccacctctacctgctgttagac
atgggatcaggtactataaaaataaaagcgttgcagaagaaggtgaatgatggtgaatgg
taccatgtggactttcaaagggatggacggtcaggaaccatatctgtgaacacgttacgt
acaccatatactgcaccaggggaaagtgaaatccttgacttggatgatgacttgtatctt
ggaggcttaccagaaaataaagcaggcctggtcttcccaacagaggtgtggacagcactt
ctcaattatggatacgtcggctgcattagagatttatttattgatggtcagagcaaagac
attcgacagatggctgaaattcaaagtacagctggagtaaaaccctcgtgctcgagagaa
actgcaaagccatgccttagcaatccctgtaaaaacaatggtgtatgcagggatgggtgg
aacagatacgtttgtgattgctctgggacagggtaccttggcagatcttgtgaaagagag
gcaacaatattaagctatgatggaagtatgtttatgaaaatacagctccctgttgtgatg
cacacagaggcagaagatgtttctttacggttcaggtctcagcgagcttatggcatttta
atggcaacaacttccagggagtctgctgataccctccggttggagttggatgcgggacga
gtaaaactaacggtcaacctagactgtatcaggattaactgtaattccagcaaaggtcca
gaaaccctttttgctggctataacctcaatgacaatgagtggcacacagtgcgtgtggtt
cgacgaggaaaaagtttaaagttaatggtggatgaccagcaggccatgacaggtcaaatg
gctggtgatcacacacggctggaattccacaacatagagactggaataataacagaacgt
cgctacctgtcttctgtgccttctaatttcattgggcatctacagagccttacatttaat
ggcatggcatacattgacttatgtaaaaatggagacatcgattattgtgagctaaatgca
agatttgggttcagaaacatcatagcagaccctgtaacctttaaaacaaaagcaagttat
gtcgcattggccacattgcaagcatatacatctatgcacctttttttccagttcaaaacc
acctctctggatggattgatactttataacagtggcgatggaaatgatttcattgtggtt
gaattagtaaaaggatatttacactatgtgtttgacttgggaaatggtgcaaatctcatc
aaaggaagttctaataaacctctgaatgacaaccagtggcataatgtgatgatatcaagg
gataccaacaatctccacactgtaaagattgacacaaaaatcacaactcagagcacagct
ggagccagaaatttagatctcaaaagtgatttatatattggaggagtggccaaagaaatg
tataagtccttaccaaagctggtgcatgcaaaggagggttttcaaggctgtcttgcatca
gttgatttgaatggacggctccctgatctaatctcagatgctctcttctgcaatgggcaa
atagaaagaggatgtgaaggccccagcacaacgtgccaagaggattcgtgtgcaaaccag
ggagtgtgcttgcagcagtgggatggattcagttgtgactgtagcatgacctcctttagc
ggaccattatgcaatgacccgggaacaacgtatatctttagcaaaggtggtggacaaatc
acttatacgtggcctccgaatgatcgcccaagcactcgcgcagacagattggcaataggg
tttagtactgttcaaaaagaagccgtgttggtacgagtggacagttctactgggcttgga
gactatttagagctgcatattcaccaaggaaaaattggagtaaaatttaatgttggcaca
gatgacatcgctatcgaagaaatcaacgccatcattaatgatggaaaataccacgtagta
cgtttcacgaggagcggtggcaatgccacattacaggtggacaactggccagttatcgaa
cgctacccagcaggaaacaatgataacgagcgcctggcgattgctagacagcgaattcca
tatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgtcaactcacaatc
ttcaatagccaagcaaccataaaaattggaggcaaggaacggggccatcctttccaaggc
cagctctctggtctttactacaatggcttgaaagttctgaatatggcagcagaaaatgat
gccaacatcgtgatagaaggaaatgtgagacttgttggtgaagtgccttcctccatgaca
accgagtccacagccacagcgatgcagtctgagatgtcaacatcagtcatggaaaccacc
accactttggccacgagcaccgctaggagagggaaggccccgacaaaggaacctattggc
cagaccacagatgacatcctggtggcctcggctgaatgtcccagcgatgatgaggacatt
gatccctgtgagccgagctcaggtgggttagcaaatcctaccagggcaggaggaggaagg
gagtatcctggctcatctgaggtgattcgtgaatccagcagcacaacaggcatggtagtt
gggatcgtggcggcagcagcgctgtgtatcctcattctcctgtatgccatgtacaagtac
aggaaccgagacgaaggatcgtatcacgtagacgagagtcgaaactacatcagtaactca
gcacaatccaatggggctgtaatcaaggaaaaacagcccaacagcgctaaaagttccaac
aaaaacaagaaaaataaggataaggagtactatgtctga
DBGET
integrated database retrieval system
