Tympanuchus pallidicinctus (lesser prairie-chicken): 128073142
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Entry
128073142 CDS
T08967
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128073142
04020 Calcium signaling pathway
128073142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128073142
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128073142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128073142
NCBI-ProteinID:
XP_052523564
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKG
SYLRNGWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAIVMFAIIGLEFYMGKFHKTCFSNETGEEVGDFPCGEEPPARQCESG
TTCREYWQGPNYGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVML
AEEDKNAEEKSPLDGRAASEGPIQQGTAPAETSSGSSYNMLKRAAIKKSKNDLIHAEEGS
PFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWIVLCVVALNTLCVAMVHYDQ
PEKLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAV
KPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALL
GMQLFGGQFNFRDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSS
IYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSP
MSAANISIAAFVKQTRGTVSRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHNFRASCE
ALYNELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRGEGRNNISKLSPVDMQEVEQIKV
SSTDGAEAPRKHHRHRDKEKLGEQEKGDVTKDENGESGINNKEERHRQHRSRSKEVEGGS
KEGKGERIRGLEGGKRHHRRGSVEEGAEKEHRRHRTHRHSAERQGKEGNGTINGARSERR
TRHRGGSRSGNREGEPGSKGENGEEPHRRHRFRSRALSTYDSVEKENREKEGETAEKEHQ
NHQSKENQCEIEASGSVSIPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVN
IPVTITAPPGETTVIPMNNVEFESKAEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRR
LFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIK
MIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKT
IKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKD
CRGQYLDYEKNEVEAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEE
QGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACID
FAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEE
MLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADNFIN
LSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGN
IALNDETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSSRACDPLSGLTKNECGS
DFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAAC
GRISYTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRT
ALEIKLASGGVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIF
DFYKQNKNSREQVHQPPGGLCQPGPVSLFHPLKATLEQTQPSAFSNAKAFLRQKSSASLN
NGGTLPAPEGGIKESSSWGTQRTQDVFYETRTPAFERGHSEEIPIERVVEMREISPTLAN
GEHQPGLESQGRAASMPRLAAETQPIPDTSPMKRSISTLTPQRPHPMHLYEYSLERVPTD
QVHHHHHHRCHRRKEKKQKSLDRTTHQLADGEAVAQSGESSSKDKKQERGRSQERKQHSS
SSSEKQRFYSCDRYGSRDRSQPKSADQSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGA
STPCRGRRQLPQTPLTPRPSITYKTANSSPVHFGTSPGGLPPFSPGRLSRGLSEHNALLR
GDQQPPPAAVARIGSDPYLGHRDAADSPVSAAPEDTLTFEEAVATNSGRSSRTSYVSSLT
SQSHQARRVPNGYHYTLGLNTGPGTGTRGRSYYHEADEDDWC
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgattttagctacaatcatagccaattgtattgtgctggctctggagcaacatttgcct
gatggagacaagacacctatgtcagagagattggatgacactgagccgtactttattgga
atattttgttttgaagctggtataaagatcattgctctggggtttgtttttcacaaaggc
tcttacctccgaaatggttggaacgtgatggatttcgttgtggtcctcacagggattcta
gcaactgctgggaccgacttcgacctgcggaccctgcgagccgtccgtgtgctgcggccg
ctgaagctggtgtcaggaatcccaagtctgcaggtcgtcctcaagtccatcatgaaggca
atggtgcctctgcttcagattgggctgctcctcttctttgccatcgtgatgtttgccatc
atcggcttggaattctacatggggaagtttcacaaaacctgcttctctaatgagacaggt
gaagaggtgggagattttccttgcggagaggagcctcctgccaggcaatgcgagagtggg
accacctgcagggaatactggcaagggcccaactatggcatcaccaactttgacaacatc
ctctttgctgtgctcaccgtcttccagtgcatcaccatggagggatggaccgacatcctc
tacaatacgaacgatgctgcaggaaatacctggaactggctttacttcatccctctcatc
atcatcggctctttcttcatgctcaacttggtgctgggcgtcctatcaggtgaatttgcc
aaagaacgagagagggtagaaaaccgtcgagctttcctgaaactccgtaggcaacagcaa
atagaacgggagctaaatggatatttggagtggatcttcaaagcagaggaagtcatgctg
gctgaggaagacaagaacgcagaagagaaatctcctctggacgggagggccgcctcggaa
gggccgattcaacaaggcacggcaccggcagagactagcagcggcagcagctacaacatg
ttgaaaagagccgcaataaagaagagcaaaaacgacctgattcatgctgaagaagggtct
ccttttgcccgtgccagtttgaagagtgggaagaatgagagctcatcctacttcaggagg
aaagagaaaatgttccgcttcttcatccggcgcatggtgaaagcccagagcttctactgg
atcgtgctctgcgtggttgccctcaacacgctctgcgtcgcaatggtgcactatgatcag
ccagagaaactcaccactgctctgtatttcgccgagtttgtttttctgggtctgttcctt
actgagatgtctttgaagatgtatggactgggaccaagaaattactttcattcctcattc
aactgctttgactttggggtcattgtgggaagcatctttgaagtcatctgggctgcagtg
aaacctggtacctcgtttggcatcagcgtgctgagagctctgcggctgctgcggattttc
aaagtcaccaaatactggaactccctgaggaacctcgtggtctccttgctgaactccatg
aagtccatcatcagtttgctctttctgctgttcctcttcattgtggtgtttgctctgctg
gggatgcagctcttcggagggcagttcaattttagagacgaaacaccaaccacgaatttc
gatacttttccagctgccatcctcacagtgttccagatcctgactggggaggactggaac
gcagtgatgtaccatggcatagagtcacagggcggtgtccactcggggatgttctcctcc
atttacttcatcgtcctgacgttgtttggtaactatacactcctgaatgtcttcttggcc
atcgccgttgacaacctggccaatgcccaagagctgaccaaggatgaggaggagatggag
gaagccaccaaccagaagctcgccctgcagaaggccaaggaggtagcagaagtcagcccc
atgtctgcagccaacatttccatagccgcttttgtaaagcaaactcgaggtactgtatct
cgcagctcgtcagtctccagcgtaaattcacccaagcagcagaactcctccaaatccaag
tcggtttgggagcagcgaaccagccagattcggatgcacaatttccgagccagctgtgag
gctctgtacaatgaactggaccctgaggagcgggtgcgctacgccacgaccctacacatc
cgcccagacatgaagacccacttggatcggccactggtggtggagccaagaggtgaaggg
aggaacaacatcagcaagctgagccctgtggatatgcaggaggtggagcagatcaaggtc
agctctactgatggagcagaagctcctcggaagcatcaccggcatcgggataaggagaaa
ctgggagagcaagagaaaggtgatgtgaccaaagatgaaaatggggaatctggcatcaac
aataaggaggagaggcacaggcagcacagaagccgcagcaaggaagtggaagggggcagc
aaggaagggaaaggtgagcgcatcaggggcctggaaggagggaagaggcaccatcgccgg
gggtcggtggaagaaggcgctgaaaaggagcaccggaggcaccgcacgcaccggcactct
gcagaacggcaaggcaaggagggcaatgggaccatcaatggggccaggagcgagcggaga
acccggcaccgtggagggtcgaggtctgggaaccgggaaggagagcccggctccaagggt
gagaacggagaggagcctcacagacggcaccggttcagaagcagggcgttgtcgacgtac
gattcggtggagaaggagaacagggagaaggaaggggagactgctgagaaggagcaccag
aatcatcagtccaaggagaatcagtgtgagattgaggccagtgggagtgtgagcatcccg
gtgcacacccttcccagcacctatctgcagaaagtgccggagcagccagaagatgctgac
aaccagaagaacgtgacacgcatgattcagccgcctctggacaaaaccaccactgtgaac
atccctgtcaccatcactgccccgccaggagaaaccaccgtcattcccatgaacaacgtt
gagtttgaaagtaaagcggaagagaagaaggacgttgatgacttgacaaaaaatgggcct
aaaccaatcttgccttacagttccatgttcatcctaagtcctacgaacccgatccggcgt
ctgttccactacatcgtcaacctgcgctacttcgagatggtcatcctcatcgtcattgcc
ctcagcagcattgccctggcagcagaagaccccgtccaagcagaatcgccgaggaacgat
gctctgaagtacttggattatatatttacgggtgtctttaccttcgagatggtgatcaag
atgattgacctggggctgttactccaccctggctcctatttccgtgacctgtggaacatc
ttggacttcattgtggtcagtggggccttggtggcatttgccttctcaggaaccaaaggc
aaggacatcaacacgatcaagtcgctgcgggttctgcgggtcctgcgaccactgaagacc
ataaaacggctgccaaaactaaaggctgtctttgactgcgtggtgaattccctgaagaac
gtcctcaacatcctcattgtttatatgctcttcatgttcatctttgctgtcattgctgtg
cagctcttcaaaggcagattcttctattgcaccgacgagtcgaaagagctggagaaggat
tgcaggggtcagtaccttgactatgaaaaaaatgaggtggaggcgcagcccagagaatgg
aaaaaatacgagttccattacgacaacgtgctgtgggctctgctgacacttttcactgtc
tccacaggagaagggtggccaactgtgctgaagcactcagtggatgctacctacgaggaa
cagggtcccagccctggctaccgaatggaaatgtctatcttttacgtggtgtattttgtt
gtcttcccttttttctttgtgaacatctttgtggcgttaatcataatcaccttccaagag
caaggagataaagtgatgtcagaatgcagcctagagaaaaatgagagggcctgcattgac
ttcgccataagcgccaagccgctgacccgctacatgcctcagaacaagcagtcatttcag
tacaagatgtggaaattcgtggtgtcccctccctttgagtattttatcatggtcatgatt
gcactcaatactattgttctcatgatgaagttctatgatgctccagaagcatacgaagaa
atgttgaaatgcctgaatattgtctttacatccatgttttcaatggagtgtgtgctgaag
atcattgcctttggtgtgctgaattatttccgagatgcctggaatgtctttgattttgta
acagtgttgggaagtattactgatattttagtaacagagattgcggacaacttcatcaac
ctcagcttcctgcggctcttcagggcagcaagacttatcaaactccttcgccagggttac
actatccgcatcttgctttggacgtttgtgcagtcatttaaggccttgccttacgtgtgt
cttctcattgcaatgctcttcttcatctatgccattattggcatgcaggtatttggaaac
attgcactaaatgatgaaacctccatcaatcggcacaataatttccgtaccttccttcaa
gccctgatgcttctcttcaggagtgccacaggggaagcctggcatgagatcatgctgtca
tgcctgagcagcagggcctgcgacccgctctctggcctcaccaagaacgaatgcggcagc
gacttcgcctatttctacttcgtgtcgttcatcttcctctgctccttcctgatgttgaac
ctgtttgtggctgtaatcatggacaactttgaatacttgacgagagactcctccatcctt
gggccccatcatttggatgagtttgttcgtgtctgggctgaatacgacccagctgcctgc
gggcgcatcagttacacagacatgtatgagatgctgagacacatgtccccacctctaggc
cttggaaagaaatgccctgctcgcgttgcctataagcgcctggtgaggatgaacatgccc
atctcacccgaggatctgacagtccacttcacctccacgctgatggccctgatccgcact
gctctggaaatcaagcttgcctcagggggtgttaagcagcaccagtgtgatgctgagctg
agaaaggagatctctctggtttggcccaacctgtcccagaagacactggatttgctggtg
cctcctcacaaacctgatgagatgactgtggggaaggtctacgcggcgctcatgatattt
gacttctacaaacagaacaagaacagcagggaacaagtccaccagcctcctggggggctc
tgccagcctggaccggtgtcactcttccaccccttgaaggccactttggagcaaacccaa
ccctcagccttcagcaatgcgaaggcattcctgcgccagaaaagctcagcctcgctcaac
aacgggggcacattgccagccccagagggtgggatcaaagagtccagttcctgggggacc
caacgcacccaggatgtgttttatgaaaccaggaccccagcttttgaacgaggccactca
gaggagatccccattgaacgggtggtggaaatgagggaaatcagccccacgcttgccaat
ggagagcaccaaccagggctggagagccagggtcgggcggcttccatgccgcgcctggct
gccgaaactcagcccatcccggacacgagccccatgaagcgctctatctccacgctgacc
ccgcagcgtccacatcccatgcacctctatgagtactccctggaacgcgtgcccacggac
caggtgcatcaccaccaccaccaccgctgccaccggcggaaagagaagaagcagaagtcc
ttggacaggaccacgcatcagctggccgacggggaagctgtggcccagtctggtgaatct
tcttccaaggacaagaagcaggagcgtggacggtcccaagagaggaagcagcactcttcc
tcctcttcagaaaagcagcgcttctactcctgtgatcgctatggcagccgggaccgatcc
cagcccaagtctgctgatcagagcaggcccacttcgcccaatggtgggcctgagcaaggt
ccccacagacagggcagtggttcggttaacgggagccccttgctgtcgacatctggtgct
agtaccccctgccggggtcggaggcagctcccgcagacccccctgaccccacgccccagc
atcacttacaagaccgccaactcctcgcccgtccacttcggcacgtcgccgggcggcctc
ccgcccttctccccgggccgcctgagccgcgggctgtctgagcacaacgcgctgctgcgt
ggggaccagcagccgcccccagccgcggttgcccgcatcggctctgatccttacctgggc
caccgcgacgccgccgacagcccggtgagcgcagcgcccgaggacacgctcaccttcgag
gaagccgtggccaccaactcggggcgttcctccaggacttcttacgtctcctccttgacc
tcccagtctcaccaagcacgccgggtgcccaatggctaccattacacgctggggctcaac
acggggcccggcactggcaccaggggacggagctactaccacgaagccgacgaggacgac
tggtgctag
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