Tympanuchus pallidicinctus (lesser prairie-chicken): 128073185
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Entry
128073185 CDS
T08967
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tpai03037
]
128073185 (CFAP54)
Cilium and associated proteins [BR:
tpai03037
]
Motile cilia and associated proteins
Sperm associated proteins
128073185 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
128073185
NCBI-ProteinID:
XP_052523683
LinkDB
All DBs
Position
Unknown
AA seq
3172 aa
AA seq
DB search
MAESAEPPPPTPQPRPLPAAFFGALAPGNPVVDSLDAELRDVMGFLRRLRGTGEAEPQRH
ELHRRGANTLFKIWTKYKPRLPDWYYNDKLLKVGDSLAQIKEYKLALTQCYGRYLQQFCS
VNPDDITDDENQFKSTFFPNGFKDKNASLTFHALQERNVCVYQMVCSSDRNLQKQESLQT
CFKVLSSLRLTMQVALPQQNLCWLIYNGTIHIYTICRHLMMIGQSAQVLEYLLWASVCME
LSIPLLSVHYLTWRATLYAAVCQCYFDCQAGIHGEVFARRGLIQIDELKQLENISSSQKS
SETGKIFREATIKMSVMIFKRAVYESRRKPKSYSRPKLRASLKEAQKLPWPRTTTEQLLM
EMFDGTAAQFLAILEALSDSSRRVLHPTPPVPDEPEIHDVISELFFAGLEILSGGVSSTD
IQGDDCADKFGMINASSTLLQLILTGEKRVSGEAAVKFVKLAFNYEEWDVFDSAIVFVTN
FLQAQNDPKWKKAEMELQLLTLMRPLLFPGKFRHGFSVDESNTRRDHLPCVSDKKSTVRT
GSLKHGEPSHDLIILATTVFSYVSTSKQNILPDKEILFDILVFLWQKCKTGLQLNPMNGN
GYFKYNHKYKASKWVYVLWIINEVILQSNVADTDVVMAAEITLCLTAVLENMADSASKSK
KKAGKRSVILSVDETCDIPEILMRSPTEQLQLAYENLEKTINEMNKSRLMTFVPDGKSVF
DNCCTKVDSHGQNLSSVLEWSNDKTRTGNIFLMDLHLELIQAQHRIAVKLLKLTQGVQKD
GRNLKSGEYHVKKIEDSHYLTEADIMGKIKKNKLSRAIFLMEKAVQMFPKDLSTYSQRQL
LQEALTLIEQVEAEQTALYHSLKEFMSSKKKNKIPPPPLLLSRSHCSMTFKPASFSSDVQ
VAWYSILGCVAGENNSKVRLNNNKLPNAGEEILADGKSLLEIQGLDPNEKYVFAVAAYSS
DGKLIGDAIGETTRPILAYPPLSATTVRAYLTQVAYQTGNYTLARGAFSPMWDYFVSNSS
PLPTNAAVVSARSTLTISEKRLRFEAISQTSPVTLYLFLRNIFAVCDINIMEGALFCDSI
YCNEILYKKQVARLAECERMTVAIELSNFLNDASYALQSVVQCYGLLAPIIYHKISAVPV
VQILIKCLAVLQEIPSATLQRRQAGCYESIQHMIACASFYTAKVLRSLKEYELAVIIINY
GKKLLDSSQRTSPGQSGATESEETHKIKKTSAKTSHLAAMEKATENLSALESNLLRLTQP
ARGSELAGQEDPLFLYPIISCWTSNTAYREVMKFRKKSRFLEFFIQVLHKILNEEKFHSV
LEWAENVQTYLKRRNNHVLCINETPRCKTSSPSEPEGTKKYTVGIKERSMETSPLKKKEA
SALKKQRKETPSATRKRQTLRQYFAKHANIMKSPEAQRNFTEELRKVAHNTLVVLLKPIV
SSYLNQKKFHQICLEEMPWRSQMNIYLAIAHYNLFKKKLEEQYNIGIYGSRRQDSYSILD
PEIFSLNNSGTVVVREALESNRRTSNPLPLEKSPSELTKKYGSSEHNTKLWGRDAPRTQM
TNDMQISISLSPKERKQFPSDTILLDHFTKIFLHLRRAAVLAHRGGHWTLLQNACRELWN
YTQESQSIANHSHSHKDAFPITREFLRNTVWLPFYLASDMIIDMITELQASNSLKIVEPE
GDFCIPSCLGGITDENGGSNFHPQFPLDDVNVVDLKWICNLILKTLEFLYQMKKWEALVH
IAVQFNVFTHERYTEQVSPLLVYAQRQLLERIQQFSGPDSHESHFTKYLSDNANKMSCRD
YIGKNLQLPVAHSASVLIFPDCFFYPELKNDCADGTQIKPIVNVPLDVKDTLKCFRETLK
KSKYHSRTLRHSRKLLSLFLAYTQENVGRTISQISPNRRLEFNVGAELAFLPTPSDPSQE
KFNFSSSIESKPIPHSQLSLIVSSYEQTIEILEINNQRDLKVQALHELGNLHFFAGNKRA
AFKHWCQALDETLNIADILNTWQELGFPKNAMECFEVGRSTDISQKFLSQAGIWGCLHAA
VLVAKIAQYITTSNVRLRTKYCQFSAILFKTLFRASLPHPTSDCDFAQYEIHVLIPGIDL
FSDRYRADISTVVASLNFLMSELHCAKQNLTILPLFTLYQYFVSEICKDTAKCIEGRIFK
IKVLTDIGFFTEAFHELYLLNCGERIPWKIPAGYQKPEETKSLLYFDSSKSLLSFTNLQV
LEDIFNWSLSLTVVPLCDQQIMNKLILAKMHFIICLSDTINNIPEKVEKCIYSVDNKIDG
VAPTNEKVDAVKNSRRREQRNTVMQLINCKAELNMTMLKGILLTEAEESLNHLVQNIQDK
YDGKISLCSAEDLEVLIEAKLQLAAISQQWHRAAFSVALAFSAIRLLQDADIFRMTATTF
QEKKDKRGSLDSCVEDAQQPHSSIAEDHLNIHLWLRCRKMLVTALATQLPSVGDKEENYV
AERKSIMKEVILEAEAFGDIETQAEMMVQAAILDLQEGCPTADIELLLQNIISLLQEDKF
ISPPASLTLVKSMLLMTDVLALQTIENMENSSSAVEPLNLLNLAHEITVKEIFFCGEYIE
QQIEDSTMTCLVLPAKNIYLPYINLLAQVKMRIGNTLAERVACTPEREDPLQWLRALKHL
ETALKLCRASATKALDMEAQLLFQIGKVECQITKAGNNKSYRAVETLLEAIKLSQEHDQN
FELIRRSYLEIALLYLHFATNNENLSQRDKMVASKSEISAGELSSSPGEALKSEGCKVRG
WIAVRAARQVSEAVVASQLLTGMESIKENNVKDTVQQKIPEFASMDLLASYRDYLSDGYN
VVCGSHTASSTENKQIIKEQNQNEGMECLDTSSSQKKEIITWVHLIRYHSYIKGLCHANL
FAAHKSGLGSLSERDGRLNSLFDSRIVLRVAEMHSFLKKHLFEYSVCCLENFPEQLQDLE
VSHGSPLDSSKASLENSGILCVKIASPVSAITEADGQTESRATNASNKEISIQWYIPPLA
KPTNDTETKILLLYAYNTEPVKISNVKFFSSMSVFSGQLWIPLARIISLREKLSNLKHQV
EMLMQSLGNSSAAEPTGFLEQNETLKTSPSEKTEMNIAKVHLDEKTEEMAIRCLSEVKAL
LSAVPVMTLPLTEIPFDITLQSIASLEDMFDLANGCTITEESLFSWIISLFH
NT seq
9519 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtccgcagagccgccgcccccaactccgcagccgcggccgctgccggctgct
ttcttcggggccttggcgccgggcaacccggttgtggacagcctggatgccgaactgcgg
gacgtcatgggcttcctgcggcggctgagaggcacaggggaggccgagccgcagcggcac
gagctgcaccgccgcggagcaaatactctgtttaagatttggaccaaatacaagcctcga
ctgccagattggtattacaatgacaaacttctgaaagttggtgattcccttgctcagatc
aaagagtataagttggcacttacacagtgctatggaagataccttcagcagttctgttct
gtaaatcctgatgatatcacagatgatgaaaatcagtttaaatccaccttttttccaaat
ggtttcaaggacaaaaatgcatctcttacgttccatgctttgcaagagaggaatgtttgc
gtttatcagatggtttgtagcagtgacagaaaccttcagaaacaagagtccctgcagacc
tgtttcaaagtcttgtcatcattacgactcaccatgcaagtggctctacctcagcagaat
ttatgttggcttatctacaatggtacaatccatatttataccatatgcagacatttgatg
atgataggtcagtctgctcaggtgctggaatatctactgtgggccagtgtatgtatggaa
ttatccattccactcttatctgtacattatttgacatggagggccacgctatacgcggca
gtttgtcagtgttattttgactgtcaagccggcattcatggagaggtatttgctcgccgt
ggtctgattcaaattgatgaactgaagcaattagaaaatatcagttcttcacagaaaagt
tcagaaacaggaaagatttttagagaggcgactataaagatgtcagtaatgattttcaaa
agagcagtgtatgaatccagacgaaagccaaaaagctattctcgacctaagttaagagct
agcttaaaagaagcacaaaaattgccatggcctcgcacaacaactgaacagctgctgatg
gaaatgtttgatggtactgcggctcaattccttgccatcctggaagctctgtctgatagt
agtaggcgtgtgctgcaccctactccacctgttcctgatgaacctgaaattcatgatgtg
atttcagagcttttttttgcagggctggaaatcctctcaggtggagtgagcagtactgat
attcaaggagatgattgcgctgataaatttggtatgattaatgcatcatcaactcttctg
cagttgatactaacaggagaaaagagagtgtctggagaggctgctgtgaagtttgtaaaa
ttagctttcaactatgaggagtgggatgtgtttgattctgctattgtatttgttactaat
tttcttcaggcccagaatgacccaaagtggaagaaggcagaaatggaactccaacttctt
accttgatgcgaccgttactatttccaggaaaatttaggcatggtttttctgttgatgaa
agtaatactaggagagatcatttgccttgtgtttcagataagaagagtacagtcagaaca
ggttccttaaagcatggagagccttctcatgatcttatcattttggcaacaacagtgttc
tcctatgtctctacatctaagcagaacatcctacctgacaaggaaatactttttgatatc
ctggtgtttttgtggcagaagtgtaaaacaggacttcagttaaacccaatgaatggaaat
ggctactttaaatataaccacaaatacaaagcttccaaatgggtttatgtactgtggata
ataaatgaagtgattctgcaaagtaatgtagcagatactgatgttgtaatggcagcagag
ataaccttatgtctaactgcagtactggaaaatatggctgattctgcaagtaaatctaag
aaaaaagcagggaaaagaagtgtaattctctctgtagatgaaacctgtgacattcctgaa
atattaatgagaagtcctacagaacaactgcagcttgcttatgaaaatcttgaaaaaaca
attaacgaaatgaacaaatctcgcttaatgaccttcgtaccagatggaaagtcagtattt
gacaactgctgtacaaaggtggactcacatggccagaatctaagttctgttttggaatgg
agtaatgataagacaagaacaggaaatatttttttaatggatttacatttggagctcatt
caagcccaacatcgaatagccgtgaaacttcttaaactgacacaaggtgttcaaaaggat
ggcagaaatcttaagtccggcgagtatcatgtgaagaagattgaagattcccattattta
acagaggcagatataatgggaaaaataaagaagaataagctatccagagcaatctttttg
atggaaaaagctgtacagatgttccctaaagacctaagtacttattcccaaaggcagcta
ctgcaggaggcactaactttaatcgaacaagttgaagctgaacaaactgcgttgtatcac
agtctcaaagaatttatgagcagcaagaaaaaaaacaagattcctcctcctcctctctta
ctttctagatcacattgctccatgacatttaaaccagcctcattctcctcggatgttcag
gttgcatggtacagtattttgggctgtgtagcaggagaaaataattcaaaagtaagatta
aataacaataaacttccaaatgctggagaagagatactggctgatggaaaaagcctcttg
gaaatacaaggcttagatcccaatgagaaatacgtatttgctgttgcagcatattcttct
gatggaaaacttattggtgatgctattggggaaacaactaggccaatcctcgcatatcca
cctctttctgctactactgttcgagcttatctaactcaggtagcctatcagactggcaac
tacacgttagccagaggagcattttcaccgatgtgggattattttgtttcaaattcttct
ccactgcccaccaatgcagctgttgtttccgcaagaagtactttgactatatctgaaaag
aggttacgttttgaggctatatctcagacctctcctgtcaccttgtatctctttctgagg
aatatatttgctgtttgtgacattaatatcatggaaggagcactcttctgtgattccatt
tattgcaatgagatactttataagaaacaagttgctagattagcagaatgtgagagaatg
actgtggcaattgaacttagtaatttcttgaatgatgcaagttatgcactgcagtctgtt
gtacaatgctatggtctccttgctccaattatttatcacaagatttctgcagtgccagta
gttcagattctcattaagtgcttggccgtccttcaagaaattccaagtgctactttgcag
aggagacaggcaggctgttatgagagtattcagcatatgatagcttgtgcttcattttat
acagcaaaggttctacgttcattgaaggaatatgaactagcagtgattattattaactat
gggaaaaaattgttggattcctcacaaagaacctcacctggccagtcaggagctacagaa
agtgaagaaacacataaaattaagaagacttctgcgaagacatcccatttagctgcaatg
gaaaaagcaacagaaaatctaagtgctcttgaatcaaatctcctaagactgacacaacca
gctcgtggatcagagcttgcaggacaggaagatcctttgttcctctaccccataatttca
tgttggacatcaaacactgcttatcgagaagtgatgaaattcagaaagaaatcacgtttt
ctagagttctttattcaagttttgcacaaaatcctgaatgaagagaaattccacagtgtt
ctggaatgggcagaaaatgtgcaaacttacttgaaaaggaggaacaaccacgttctctgt
atcaacgaaactccaagatgtaaaacaagctctcccagtgagcctgagggcaccaagaag
tacactgtaggaattaaggagagaagtatggagacctcacctttaaagaagaaggaagca
tcagctttgaagaaacaaagaaaagaaaccccgagtgctactagaaagaggcagactctt
agacagtattttgcaaaacatgcaaacataatgaaatctccggaagcacaaaggaatttt
acagaagaattacgaaaagtagctcacaacaccttagtggtactgctgaaaccaattgtg
agtagttacttaaaccaaaagaagtttcatcagatatgtcttgaagagatgccctggagg
tcccagatgaatatttatctggcaattgcacactacaacttatttaaaaagaagctagaa
gaacaatataacattggaatttatggttcacgtcgtcaagacagttacagtattctggat
cctgagatattctcattaaataattctggaactgtagtggtgagagaagctctggagagt
aacagaagaacatcaaatcctcttcctcttgagaagtcaccttcagagctgaccaaaaaa
tatggatcttctgagcacaacactaaattgtggggaagagatgcacctcgaactcaaatg
acaaatgatatgcaaatatccatctcactttctcccaaagaacgcaagcagtttccatca
gataccattttattggaccattttacaaaaatctttctacatttaagaagagcagcagtt
cttgctcaccgtggaggccactggacattgcttcaaaatgcatgcagagaactgtggaac
tatactcaagaatcacagtcaattgctaaccattcccattcccacaaggatgcatttccc
attaccagggagtttcttaggaacacagtttggttgccattttatttggcatcagacatg
attattgatatgataactgaactacaagcaagcaattctcttaagattgtggagcctgaa
ggagatttctgcattcccagttgcttaggaggtattactgatgagaatggtggttcgaat
ttccatccacagtttcccttggatgatgtgaatgtggttgacttgaaatggatatgtaat
ctgattcttaaaacattagaatttttgtatcaaatgaagaaatgggaagcactggtacac
atagctgtgcagtttaatgtatttacacatgagagatacacagaacaagtgagtccattg
ctggtgtatgctcagaggcaactactggaaaggatacagcaattcagtggcccggatagt
catgaatctcatttcacaaaatatctatccgataatgcaaataagatgagctgcagagat
tatatagggaagaatctacagctacctgttgcccattctgctagtgtactgatctttccc
gactgctttttctatcctgagttgaaaaatgattgtgcagatggcactcaaattaaaccc
atagttaatgtacctcttgatgtaaaggacacactgaaatgttttagagaaactctaaaa
aaatctaaatatcacagcagaacattgagacacagcagaaaactgctttcactttttctc
gcatacacacaagaaaatgttggaagaacaatcagtcaaatctctccaaatagaaggctg
gaatttaatgtgggagccgaattggcgtttctaccaacaccgagtgacccttctcaagaa
aaatttaatttctccagtagcattgagagtaaaccaataccgcactcacagctttcatta
attgtctcttcctatgaacaaacaattgaaatccttgaaataaacaaccagagagacctc
aaagttcaggctctacatgaacttggaaatcttcacttttttgctggaaacaaaagagct
gcttttaaacattggtgtcaagcccttgatgaaacactcaacattgctgatattcttaac
acctggcaagagttaggctttccaaaaaatgctatggagtgctttgaggttggaagatct
actgatattagtcagaaatttttatctcaggctggaatttggggatgtttgcatgcagca
gttttagtagctaagatagctcagtatataacaacatcaaatgtgagattaagaactaaa
tattgccaattttctgctatactctttaagactctgtttagggcctctcttccacatccc
acatctgactgtgactttgcacagtatgaaatacatgtgcttattcctggaattgacttg
ttctctgatcgctacagagctgacatctccaccgtagttgcaagtctgaatttccttatg
tctgaattgcactgtgcaaagcaaaatttaacaattttacctttgttcacgttataccaa
tattttgtttctgagatttgtaaggacactgctaaatgcattgaaggaagaatcttcaag
attaaagtacttacagatataggattttttacagaggcctttcatgaactgtatttactt
aactgtggagaaagaatcccatggaaaataccggcagggtaccaaaaacccgaagaaacg
aagagcttactgtactttgactcctcaaaatctctcctcagttttacaaatttacaggta
ctggaggacatatttaattggagtctgtctttaacagtagtgccactgtgcgaccaacaa
attatgaataaattaatcttagccaaaatgcatttcatcatttgcctttctgacacaata
aataatatacctgaaaaagtagaaaaatgcatatattctgttgataacaagattgatgga
gttgcaccaacaaatgaaaaagttgatgctgtgaagaattcaagacgacgggaacaaaga
aacacagtgatgcagctcattaactgtaaagctgaattaaatatgaccatgctgaaggga
attttgttaacagaagctgaagaaagtcttaaccatcttgtgcagaacatacaggacaag
tatgatgggaagatatccctgtgttctgcagaagatttagaggttcttattgaagccaaa
cttcagcttgcagctatttctcagcagtggcaccgagcagctttcagtgttgctttggct
ttctctgcaattcgacttctccaagacgcagatatttttaggatgacagcaacaactttt
caagaaaaaaaggataaaagggggagtttggattcttgtgttgaagatgctcaacagcct
cacagttctatagcagaagatcatctgaatatacatctgtggctaaggtgtcgtaaaatg
ttagtgactgcactagcaacacagctacccagtgttggtgataaggaagaaaattatgtg
gctgaacgcaaaagtattatgaaagaagtaatattagaggcagaagcctttggtgatatt
gagactcaggctgaaatgatggtgcaagcagcaattcttgacctgcaagaaggatgtccc
acagctgatattgaacttcttttgcagaatatcatcagtttactccaagaggataaattt
atttctcctccagcttctttgactcttgtgaaaagtatgcttctgatgacagatgtgcta
gcactgcaaacaatagagaatatggaaaattcttcttctgcagtggaaccattaaattta
ctaaatttggcacatgaaatcactgtgaaagaaatttttttttgcggagaatatattgaa
cagcagatagaagacagtacaatgacctgccttgtcctacctgcaaaaaatatctacttg
ccctatataaaccttctagcccaagtcaaaatgagaattggaaacacattagctgaaaga
gtagcttgcacacctgaaagagaagatccgctgcaatggttacgtgctctcaaacattta
gaaacagcactgaagctctgcagagcatctgcaacaaaagcattagatatggaagctcaa
cttctttttcagataggtaaggtggaatgccagataaccaaagcaggaaataacaagtca
tatcgagctgttgaaaccctgctggaagctataaaactgagccaggaacacgatcaaaac
tttgagctaatcagaagatcataccttgaaatagcactattatatttgcattttgccacg
aataatgagaatttgtcacaaagagacaagatggtagcttcaaaatcagagatctctgct
ggagaactttcttcctctcctggtgaggctctgaaatcagaaggctgtaaagtacgaggt
tggattgcagtaagagcagccagacaggtcagtgaagcagtggttgcctctcagctatta
actggaatggagagcattaaagaaaacaatgtgaaggatacagtacagcagaaaattcca
gaatttgcttccatggatcttcttgcttcatacagagattacttgtctgatggatacaat
gttgtttgtggaagtcatacagcatcttctactgaaaataaacaaatcataaaggagcag
aaccaaaatgaaggaatggaatgtcttgacaccagctccagccagaagaaagagataata
acatgggttcacctaattcgataccatagttatataaaagggctttgtcacgcaaaccta
tttgctgcccataaatcaggacttggatcgctttctgaaagagatggacgcttgaattct
ctttttgactcacggattgttctacgtgttgcagaaatgcattcctttctcaaaaaacac
ttatttgaatattcagtgtgttgtctcgagaacttcccagaacagctacaagatttagaa
gtgtcacatggtagtccacttgattcttcaaaggcgtctcttgaaaattctggaattttg
tgtgtgaagatagcttctccagtttctgccatcacagaagcagacggtcagacggagagt
agggcaacaaatgcttcaaataaagaaattagcattcagtggtatattcctcctctggca
aagccaaccaatgatacggagactaagattttgctgctttatgcttataatacagagcct
gtcaagatcagcaatgtcaagtttttcagttcaatgtctgtgttttcaggtcagttgtgg
attccattagcgagaattatttctttgagagagaaattatctaatctgaaacatcaagtt
gaaatgctgatgcaaagtttgggaaactcttcagctgcagaacctacaggttttcttgaa
caaaatgaaaccctgaaaacaagtccttcagaaaaaactgaaatgaatattgcaaaagtg
catcttgatgaaaaaacagaagaaatggctataaggtgcttatctgaagtcaaagctctg
ctctctgctgttccagtcatgaccttgccattaactgagattccatttgacattactttg
caatcaatagcaagtttggaagatatgtttgatcttgcaaatggttgtacaataactgaa
gaaagtcttttcagttggatcatttctcttttccactaa
DBGET
integrated database retrieval system
