Tympanuchus pallidicinctus (lesser prairie-chicken): 128073242
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Entry
128073242 CDS
T08967
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128073242 (CAPRIN2)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128073242 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
128073242
NCBI-ProteinID:
XP_052523855
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MVQLSQAPFRCPSSPSGRSEEGEEKSMKAAKQQVTPAGDSQPSASPLQAALNSAASPSQA
YETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKKGEALNQDQLEAVEKYDEVVHNLEFA
KELQKTFSGLSQDLLKAQKKAQRRESLLKLEAEKKKLRTILQVQYVLQNFTQEHVQKDFK
GGVNGAIYLPSKELDYLIRFAKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKPVVGTT
YKHMKDLLSKLLDSGYFESIPTPRTTVPVKELEEVHRKSERTRQMSKGEPIKESESLVEL
MKSEIQPQEFLNRRYLPEAEYSVKKKPEEPKSWEAECARKQEPPKSWEMLVDIEEQKQKK
ETLKPWESRVRQQETKRPDSPKHWEAHVKEEEQKREPTKSWETRVEEEQKKQEAPKAWVA
RVREEQESSKPWIAKVREEQDQKKQESPKPWVAKIREDQEQRKQESPKPWVTKAKEEPEQ
KQESPKPWVTQTREEPEQKKQEPVKSWEVHVREEPEQKKQKPVKAWAAHVREEPEQKKQE
TREAWETAERQQQVSSQQLQNPPKSWGAASVGPKEQMGPKKFDMEPKERRERKQKVEHEI
KRVPKPVHQPAAEFCSTSTLPKDPVLRREKLQDLMTQIQGTYNFMQESILDFDKASPSAI
GSSQPPSVTPASSPVASKEQKLPSQSDFLQQPLRATESSMTLHGSNTSLASADQTLSGSE
TEELVTSQTVQASASLSQETEKYASQPLYQTSPHISEPLIPKKIEIAQATVPLPSEPQSP
LPTSSTSITPVPQGQSFQSPPASSSSVTITAAPFQAMQTVFKVNAPLPPRKDQEVKEDSS
YSTGYNQSFSTASTQTPPQTQLQSSHVAEQTSLSQESLSSGVNYQPDGAVSVSNGSLAFY
PAQTNVIPRPPQPYLNSRGSVRGSARGGRSLTNSYRSPGGYKGFDAYRGSPSITNGTYGQ
LQFPARDYAGMPYSQRDVNYQQCYKRGGITSGPRANSRAGWSDSSQVSSPERDNETFNSG
DSGQGDSRSITPVDMPVTSQAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFD
LLLNNLGETFDIQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGA
PDHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttcccaagcccctttccgttgcccatcgtcaccttcaggccggtcggag
gagggggaggagaagagtatgaaggcagccaagcagcaggtgaccccggctggggacagc
cagccctccgccagcccgctgcaggccgcactgaactcggcggcctctccttcccaggcg
tacgagacctacatcgacaatgggctcatctgcctcaaacacaagatcaggaatatcgag
aagaagaagctcaaactagaagactacaaagatcgactgaagaagggagaggccctcaat
caagaccagttggaggcagtagagaaatatgatgaagtagtacacaatctagaatttgcc
aaggagcttcagaagacattttcaggtcttagccaagatttgctgaaagcacagaagaag
gcccagcgaagagagagtctattgaagcttgaagcagagaagaaaaaactgcgtacaatt
cttcaagtccagtatgtgctgcagaactttactcaagagcatgttcagaaagatttcaaa
ggtggtgtgaatggtgcaatatacttgccttctaaagaactagactacctcataagattt
gcaaaactgacatgtccagaaagaaatgagagcttgagtgttgaagatcagatggaacaa
tcatctctttacttttgggaccttctagaaggcagcgagaaacccgtggttggaacaaca
tataaacacatgaaggacttgttatccaaacttctagactctggttactttgaaagtatt
ccaactcctcgcaccactgtgccagtgaaagaattggaggaagtacatagaaaatctgag
aggacaagacagatgtcaaaaggagaacctatcaaagaatcagaatcccttgtggagctt
atgaagtctgaaatacagccacaggagtttctcaacaggcgttatttgcctgaagcagaa
tactctgtcaagaagaagccggaagagcccaagtcttgggaagctgaatgtgctagaaaa
caagaacctccaaaatcctgggaaatgcttgttgatattgaagagcagaagcagaaaaaa
gagactttaaagccttgggaatctcgtgttaggcagcaggaaacaaaacggccagattca
ccaaagcattgggaagctcatgttaaagaagaggagcagaagcgtgagcctacaaagtct
tgggagacccgtgttgaagaagaacagaagaagcaagaagctccgaaggcctgggtagca
cgtgttcgagaggaacaggagtcctccaaaccttggatagcaaaggttagggaagagcag
gatcagaagaaacaggaatctcctaagccatgggtagcaaaaattagggaagatcaggaa
cagagaaaacaagagtccccaaaaccttgggtaacaaaagctaaggaagaaccagagcaa
aagcaggaatctccaaaaccttgggtaacccaaactagggaggaaccagaacaaaagaag
caagagcctgtgaaatcatgggaagtgcatgttagggaagagccagagcagaagaagcag
aagcctgtgaaggcttgggctgcacatgttagggaggagccagagcaaaagaagcaggaa
actcgagaggcttgggaaacagctgagaggcaacagcaagtgtcatcacagcagttacag
aatcctccgaagtcctggggagctgcaagtgttgggccaaaggagcagatggggccaaag
aagtttgatatggaacccaaagaaaggcgggagcgcaaacagaaggttgaacatgagatt
aaaagagtgcctaaacctgtacatcagccagctgcagaattttgctctacttcaactctt
ccaaaagatccagtactgagaagggaaaagcttcaggatttgatgactcagatacaaggg
acttacaacttcatgcaagaatccattctggattttgataaagcttcaccaagtgccatt
ggttcatctcaaccaccttcagttactccagcaagtagccctgtagcttcaaaagaacag
aaactgccaagtcaaagtgattttcttcaacaacctctgcgagctactgaatcatccatg
acactgcacggttctaatacttccctagcatctgctgatcagacactttctggctctgaa
actgaggaactggtaacatcacagacagtacaggcatcagcatcgctgtctcaagagact
gagaagtatgcttcccagccactgtatcagacaagtcctcatatttctgagccactgata
cctaaaaagattgaaatagcccaggcaactgttcctctcccaagtgagcctcagtcacca
ttgccaacttcaagcacctccataacaccagtaccacaagggcagagctttcagtctcct
ccagcaagtagcagttctgtcacaataacagcagctccctttcaagctatgcagactgta
tttaaagtgaatgctcctctgcctccacgtaaagaccaggaagttaaagaggattcttca
tattcaacgggatataaccagagtttctctacagcaagtacacagactcctcctcagacc
cagttgcaatcttctcatgttgcagaacaaacctctctttcacaggaatctctttcttca
ggagtgaattatcaacctgatggagctgtttctgttagcaatggtagccttgccttttat
ccagcacagacaaatgttattcccagaccccctcagccttaccttaacagtcgtgggtct
gtcagaggatctgctagaggtggaaggtctctgaccaattcatatcgttcccctggtgga
tacaaaggttttgatgcttacagaggatcaccttcaataactaatggcacctatggccag
ctgcagttccctgctagagattatgctggaatgccgtattctcagagagatgttaattac
cagcagtgctataaacgaggtgggataactagcggtccacgagcaaattcaagagcaggg
tggagtgattcatctcaggtgagcagtccagaacgagacaatgaaacctttaacagtgga
gactctgggcagggagactctcgcagcatcacacctgttgatatgccagtgacaagccaa
gctgccactatactaccagtgcacgtctaccccctcccacagcagatgagagttgccttc
tctgcagctagaacatcaaacctggcccctggaactctagaccagccaattgtgtttgat
ctattgctgaacaaccttggagaaacatttgacatccagcttggtagattcaattgccca
gtgaatggtacttatgtctttatcttccacatgctgaagctggctgtaaatgttcccctg
tatgtgaacctcatgaagaatgaagaggtcctagtgtcagcatatgcaaatgatggggct
cctgatcatgaaacagccagtaaccatgcagtcctgcagctgttccagggagatcagatc
tggttgcgtctgcatcggggagccatttatggaagtagctggaaatactctactttttcg
ggatacctcctttatcaggactaa
DBGET
integrated database retrieval system
