Tympanuchus pallidicinctus (lesser prairie-chicken): 128073377
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Entry
128073377 CDS
T08967
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128073377 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
Gurken_M
cEGF
Motif
Other DBs
NCBI-GeneID:
128073377
NCBI-ProteinID:
XP_052524191
LinkDB
All DBs
Position
Unknown
AA seq
2550 aa
AA seq
DB search
MKRLLATGLLLALLPAPTRGVRCSQLAESCLNGGKCETFLNGTEVCQCSSAHVGERCQLP
NPCLSSPCKNAGTCIPLVRGSTADYSCVCRLGFTDELCLTPLDNACLNNPCRNGGTCDLV
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEVHYICSCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTT
YDCTCLPGFAGQNCEENIDDCPGNNCRNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECSEGFSGVHCEIDIDECNPDPCHYGTCKDSIAAFTCLCQPGYTGHRC
DININECQSQPCRNGGTCQDRDNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGRCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGGPCKN
GGECRESEDYKRFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCLCRLGFA
GRNCDTDIDDCQPNPCHNGGSCSDGVGTFFCECLAGFRGLKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPSGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDSGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSHTCGTLHCLNGGTCISMHKSSKCVCAAAFTG
PECQYPASSPCISNPCYNGGTCEFLSDASPYYHCNCPANFNGLNCHILDFDFPGGFGQDI
IPPKIEEKCEIAVCASYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNAKGEYMIFPYY
GNEEELKKHYIKRSTEDWADMSSAVINKVKSSFYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPARNSQLYPMYVVV
AALVLLAFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHSGPLGAPTLSPPLCSPSSYIGNLKPAVQGKKARKP
STKGLSCNGKDSKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQEMALGGSGRMAFEAVPPRLSHLPVSSPS
TAMSNAPMSFSVGGAAGLSGQCDWLSRLQSGMVQNQYSAMRGGMQPGTHQQAQNLQHGMM
SSLHNGLPSTSLSQMMSYQAMPSTRLASQPHLLQNQQMQQMQQPGMQQPGMQPQPSMQQP
QQQPQQQPQPQQHHNPGSNASGHMGQNFLGTELSQPDMQPVSSSAMAVHTILPQDSQLLP
TSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSP
HSNVSDWSEGISSPPTSMQSQMGHIPEVFK
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggctcttggccacggggctcctgctggccctgctgcccgccccgacgcgaggt
gtgaggtgctcgcagctggccgaatcctgcctcaacgggggcaagtgtgaaacattcctc
aatgggacggaagtgtgccagtgcagcagtgcccacgtgggcgagcgatgccagctgccc
aacccctgcctcagctctccctgcaagaacgccggcacctgcatccccctggtgcgtggc
agcaccgccgactacagctgcgtctgccgcctgggcttcaccgacgagctctgcctgaca
cctctggacaacgcctgtctcaacaacccctgccgcaacgggggcacctgcgacctggtg
acactcagcgagtacaagtgccgctgcccgccgggctggtcaggtaaaacctgtcagcag
gccgatccctgcgcctccaacccctgtgccaacggaggtcagtgcgtcccctttgaagtc
cactacatctgcagctgcacggccggcttccacggggccaactgcaagcaggacgtgaac
gaatgcaacatctcaccacctgtctgcaagaacggcggcagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccagcctacaccgggcagaactgcgagcatctctatgtg
ccctgcaacccctcaccctgccagaatgggggcacgtgccgtcagactggggacaccacc
tacgactgcacctgtctgccagggttcgccgggcagaactgcgaggagaacatcgacgac
tgtccagggaacaactgcagaaatggaggcacctgcgtggatggcgtcaacacctataac
tgccagtgcccacccgagtggacaggtcagtactgcactgaggatgtggatgagtgccag
ctgatgcccaatgcctgccagaatgggggcacctgccacaacaaccatggtggctacaac
tgcgtctgtgtcaatggctggacgggcgaagactgcagtgagaacatcgatgactgcgcc
atggctgcctgcttccagggggccacctgccacgaccgggtggcctccttctactgcgag
tgtccccatgggcgcacaggtttgctgtgccacctggatgatgcctgcatcagcaacccc
tgcaacgagggctctaactgtgataccaaccctgtcaatggcaaagccatctgcacgtgt
ccttcggggtacatggggccggcatgtaaccaggacgtggatgagtgctcactgggagcc
aacccctgtgagcacgcagggaaatgcatcaacacccaggggtccttccagtgccagtgt
ctgcagggctactcaggcccccgctgtgagatcgatgtcaatgagtgtctctccaacccc
tgccagaacgatgccacctgcctggaccagattggggagttccagtgcatctgcatgcct
ggatacgagggcgtctactgtgaaatcaacacagatgagtgtgccagcagcccctgcctt
cacaatggcaactgcctggataaaatcaacgagttccactgcgagtgtcccaccgggttc
aatgggcacctgtgccagttcgacatcgatgagtgcgccagcaccccctgcaagaatggg
gccaagtgcgtggatggccccaacacctacagctgcgagtgctccgaaggtttctcgggt
gtgcactgtgagatcgacattgatgagtgcaaccccgacccgtgccactatgggacctgc
aaggacagcatcgccgccttcacctgcctctgccagcccggctacacgggccaccgctgc
gacatcaacatcaatgagtgccagagccaaccctgcagaaacgggggaacctgtcaggac
agggacaacgcctacaattgcctgtgcctcaaggggaccacggggcccaactgcgagatc
aacctggacgactgcgccagcaacccctgtgactatggcaagtgcattgacaagatcaac
ggctacgagtgcacctgtgagccggggtacacagggcgcatgtgcaacatcaacatcgat
gaatgtgccagcaatccgtgccacaatgggggcacatgcaaggatggcatcaatggcttc
acctgcctctgccctgagggcttccatgaccccaagtgcctgtccgaagtgaatgagtgc
aacagcaacccctgcatccacgggaggtgccacgatgggctgaacggttaccgctgtgat
tgcgacccgggctggagcggcacaaattgtgatatcaacaataatgagtgtgaatccaat
ccctgcatgaatggtggcacctgcaaggacatgaccagcggttacatctgcacctgcagg
gaagggttcagcggacccaactgtcagaccaatatcaatgaatgtgcttccaacccgtgc
ctgaaccaaggcacgtgcattgacgatgtggctggctacacctgcaactgcctcctgccc
tacacaggagccacctgtgaggacgtgctggccccctgcgccggcggcccctgcaagaac
ggcggcgagtgccgggagtcggaggactacaagaggttctcgtgcagctgcccgcccggc
tggcaaggccagacgtgtgagattgacatcaatgagtgtgtgaagagcccctgccgcaat
ggggccacgtgccagaacaccaacgggagctaccgctgcctgtgccggctgggcttcgca
ggccgcaactgtgacaccgacatcgacgactgccagcccaatccgtgccacaatggtggc
tcctgctcggatggagtcgggacgttcttctgcgagtgcctggccggcttccgcgggctc
aagtgtgaggaggacatcaatgagtgtgccagcaacccctgcaagaacggggccaactgc
accgactgcgtcaacagctacacctgcacctgcccctccggcttcagtggcatccactgc
gagaacaatacacccgactgcactgagagctcctgcttcaatggggggacctgcgtggat
ggcatcaacaccttcacctgtctctgcccatccggcttcacgggcagctactgtgagcac
aacatcaacgagtgtgattccaagccctgcctgaatgggggcacgtgtcaggacagctac
gggacgtacaagtgcacctgtcctcagggatacactgggctcaactgccagaacttggtg
cgctggtgtgactcctcaccctgcaaaaatgggggcaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcggctggacggggctctactgtgatgtccccagcgtctcc
tgcgaggtggctgcaaagcagcaaggtatcgacgtcgctcatctctgcaggaactcaggg
ctctgtgtggacagtggcaacactcacttctgccgctgccaggccggctacacgggcagc
tactgcgaggagcaagtggacgagtgctccccaaacccctgccagaacggagccacctgc
acggactacctggggggctattcctgtgagtgcgtggctggttatcatggagttaactgc
tcggaggagatcaatgagtgcttgtcccacccatgccagaatggaggaacctgtatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccttggggcccaagtgctttaac
aatggcaagtgcacggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagacgtcaacgagtgcctctccaacccctgcgacgcgcgcggc
acccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgccggcccggctacgca
gggcgtcgctgtgacactgtggtggatggctgcaagggcaaaccttgcaggaatggggga
acgtgcgctgtggccagcaacaccggccgtggcttcatctgcaagtgccctccgggcttt
gtgggtgccacctgcgagaacgactcccacacctgcgggaccctgcactgcctgaatggt
ggcacctgcatctccatgcacaagagctccaagtgcgtgtgtgcagcagccttcaccggc
ccggagtgccaatacccggccagcagcccctgcatctccaacccctgctacaacgggggc
acctgcgagttcctcagcgatgcctccccttactaccactgcaactgccccgccaacttc
aacggcctcaactgccacatcctcgacttcgatttcccaggcggcttcgggcaggacatc
atcccacccaaaattgaggagaagtgtgagatcgccgtgtgcgcgagctatgctggcaat
aagatctgcgatgggaagtgcaacaaccacgcctgcggctgggacggcggtgactgctca
ctcaatttcaatgacccctggaagaactgctcgcagtcgctgcagtgctggaagtacttc
aatgatggcaagtgtgactcgcagtgcaacaacgcgggctgcctgtatgatgggtttgac
tgccagaagtacgaggggcagtgcaaccccctgtacgaccagtactgtaaggaccacttc
tcagatggtcactgtgaccagggctgcaataactttgagtgtgagtgggacgggctggac
tgtgcaaacaacatgcctgagaagctggcggacggcacgctggtggtggtggtgctcatc
acccccgagaacctgaagaacaattccttcaacttcctgagggagctgagccgcgtgctg
cacaccaatgtagtcttcaagaagaacgccaagggagagtacatgatcttcccttactac
ggcaacgaggaggagctgaaaaagcactacatcaagaggtcaacggaggactgggcagat
atgtccagtgctgtcatcaacaaagtgaagagcagcttctactcgagggctggcaggagg
cagaagagagagctggatcagatggacatcagagggtccatcgtctacttggaaattgac
aaccggcagtgcatccagtcgtcctcccagtgcttccagagtgcaaccgatgtggcagcc
ttcctgggggccttggcctccctgggcaacctgaatattccctacaaaatagaggccgtc
aagagtgaaacggcggagcccgcgaggaactcccagctgtatcctatgtatgtggtggtg
gctgcactggtcttgctggctttcattggagtgggagtgctggtgtcccgcaagcggcgc
agggagcatggccagctctggttcccagagggcttcaaagtgacggagtcgagcaagaag
aagcgccgagagccgcttggggaagattctgttggactgaaacccctcaaaaatgcctct
gacggcacgctgatggacgacaaccaaaatgagtggggtgacgaggagaccctggacacc
aagaagttcaggttcgaggagcaagcgatgctgcctgatacagatgaccagacagaccac
aggcagtggactcagcagcacctggatgctgccgacctccgcatctcctccatggcccca
accccaccgcagggcgagatcgatgcagactgcatggatgtcaacgtgcgaggtccagat
ggtttcacgcccctcatgatcgcctcgtgcagcggaggagggctggagactggtaacagc
gaggaggaggacgatgctcctgcagtcatctcagatttcatctatcagggcgccagtttg
cacaaccagaccgaccgcactggcgagaccgcgctgcacctggctgcccgctactcgcgc
tctgacgctgccaaacgcctgctggaggccagtgctgatgcaaacattcaggataacatg
ggcaggacccctctgcacgccgccgtctctgccgatgcccaaggagtcttccagatcctg
ataaggaacagggcgactgatctcgatgcccgaatgcacgacgggacgaccccactgatc
cttgctgctcgcttggctgtggaggggatgctggaggacctcatcaactgccatgcagat
gtcaacgctgtggatgatctgggcaagtcagcactgcactgggcagctgctgtgaacaat
gttgaagccgcagtcgtcctcttgaagaacggtgccaataaggatatgcagaacaataag
gaggagaccccgttgttcctcgccgccagagaagggagctacgaaacagccaaggtcctg
ctggaccactttgcgaaccgcgacatcacggaccacatggaccggctgccgcgggacatc
gcgcaggagcgcatgcaccacgacatcgtgcgcctgctggatgagtacaacctggtgcgg
agccctccgctgcacagcggcccgctcggggcccccacgttgtcccccccgctctgctcc
cccagcagttacatcggcaacctgaagccggccgtgcaaggcaagaaagccaggaagccg
agcaccaagggcctgagctgcaacggcaaggattccaaagacctgaaagcccggaggaaa
aaatcacaagatggaaaaggctgtctgctcgacaactccagcgtgctgtccccagtggac
tccctggagtcaccccacgggtacctgtccgacgtcgcctcccctccgctgatgacgtct
ccgttccagcagtccccttccatgccgctgaaccacctgcccggcatgcccgacgcccac
atgagcatcaaccacctcaacatggcagggaagcaggagatggccctgggcggctctggc
aggatggccttcgaggcggtgccgccgcgcctctcgcacctccccgtctccagccccagc
acggccatgagcaacgccccgatgagtttctccgtcggcggagccgccggcctgagcggg
cagtgcgactggctgagccggctgcagagcggcatggtgcagaaccagtacagcgccatg
cggggcggcatgcagccgggcacgcaccagcaggcgcagaacctgcagcacggcatgatg
agctccctgcacaacgggctgcccagcaccagcctgtcgcagatgatgagctaccaggcc
atgcccagcacccggctggcctcccagccccacctgctgcagaaccagcagatgcagcag
atgcagcagcccggcatgcagcagcccggcatgcagccgcagcccagcatgcagcagccg
cagcagcagccccagcagcagcctcagccgcagcagcaccacaaccccggctccaacgcc
agcggccacatgggccaaaatttcctcggtactgagctgagccagcccgacatgcagccg
gtgagcagcagcgccatggcggtgcacaccatcctgccccaagattcacagctgcttccc
acctctctgccgtcctccctcgcgcagcccatgaccaccacgcagttcctgaccccccct
tcccagcacagctattcctccccgttggacaacacccccagccaccagctccaggtgccc
gaccaccccttcctcactccctctcctgaatctccagaccagtggtcgagctcctcgccc
cactccaacgtgtccgactggtccgagggcatctccagcccccccaccagcatgcagtcg
cagatgggacacatccccgaggtcttcaagtga
DBGET
integrated database retrieval system
