Tympanuchus pallidicinctus (lesser prairie-chicken): 128073490
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Entry
128073490 CDS
T08967
Symbol
NRCAM
Name
(RefSeq) neuronal cell adhesion molecule isoform X1
KO
K06756
neuronal cell adhesion molecule
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128073490 (NRCAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128073490 (NRCAM)
Cell adhesion molecules [BR:
tpai04515
]
Immunoglobulin superfamily
L1 family
128073490 (NRCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
V-set
LAP2alpha
Bravo_FIGEY
Adeno_E3_CR1
Sp38
INCA1
Motif
Other DBs
NCBI-GeneID:
128073490
NCBI-ProteinID:
XP_052524438
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MMKKKSISASKASLIFFLCQMISALDVPLDSKLLEELSQPPTITQQSPKDYIVDPRENIV
IQCEAKGKPPPSFSWTRNGTHFDIDKDAQVTMKPNSGTLVVNIMNGVKAEAYEGVYQCTA
RNERGAAISNNIVIRPSRSPLWTKEKLEPNHVREGDSLVLNCRPPVGLPPPIIFWMDNAF
QRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTIQQKQPISVKVFSMDSLN
DTIAANLSDTDIYGAKPVTERPPVLLTPTGSTSNKVELRGNVLLLECIAAGLPTPVIRWI
KEGGELPANRTFFENFKKTLKIIDVSEADSGNYKCIARNILGSTHHVISVTVKASPYWIT
APRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPIAIAPEDPSRKVDGDTIIFSAVQER
SSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQVIADSPALIDCAYFGSPKPE
IEWFKGVKGSILRGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDP
TMIIKQPEYKVIQRSAQASFECVIKHDPTLLPTVIWLKDNNELPDDERFLVGKDNLTIMN
VTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLERSIEL
SWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTEVPGSQTTVQLKLSPYVNYSFRVIAVN
EIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVS
WRQKDVDDEWTSVVVANVSKYIVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLP
MVAPGNVQVHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILT
FRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKMFKTPEGVPSSPSFLKITNPTL
DSLTLEWGSPTHPNGVLTSYILKFQPINNTHELGPLVEIRIPANESSLILKNLNYSTRYK
FYFNAQTSVGSGSQITEEAVTIMDEGKMAGILRPAVGAGKGYSEILFATSPVMHTVRPTF
YKVQPLYPRIRNVTTAAAETYANISWEYEGPDHANFYVEYGVAGSKEDWKKEIVNGSRSF
FVLKGLTPGTAYKVRVGAEGLSGFRSSEDLFETGPAMASRQVDIATQGWFIGLMCAVALL
ILILLIVCFIRRNKGGKYPVKEKEDAHADPEIQPMKEDDGTFGEYRSMSAWTGKKMDKEK
KRKGSCASSSEADPVFTKAKSVRSDRSSFFRRSGDQYSNVRSETSFTRRKARQSSELRRA
SSVSASLCQEEKRSDKWIYRHGSRCHASEQQIMGLDEGSNSQAGHPHPFHQPLSCNSIHG
SLARQHSSLLHRFSQTPDYYSSDSEDTQSSKHRKVRPSATTHFSESEKNSLMKSVILPEL
ATVLKDALTAARQSITSVAQTRSHSIKHPRIPITEVPVVPLEEMGSSSQTFESDQIGSIK
NQATSGKERVDAYKDLEVDSSLEDDEVSSESPAEDEEGPDAERKFGMENQSYLFKHIKRV
LMLKTSKGECPSEEMPVLSEEGKVDNALPIHSTVENFICRIWGNPEAKHKAPEILHKLYP
LPVDKAALWGTLPTVDRPLITADSVLSTSANMDALPKDLTDRKIEEEIKRSFSLVAAQLG
VSIYCTYASKALLLWLEEEQARVKRKCVPSGAIQRKHRLCKLAANFIHDAAEDSLRLTVK
NVACLTVAWRAIWLRPWTSSLDLRCQLLSLPYTGGKLFGESLVQILKDFAEHKHSLHRMK
KKCSFGSSFSYPHKSQSSFRSPPKFKGGKGKYKVSQSFHASYERTSRFQRDTRPSRGTF
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaagaagagcatatctgcaagcaaagcttccttgattttctttctgtgccaa
atgatttctgcattggatgtacctcttgattcaaaacttctagaagaattgtctcaacct
ccaacgataactcagcagtctccaaaagattacattgttgaccctcgagagaatattgta
atacagtgtgaagcaaaaggaaaaccacctcctagtttctcctggacacgcaatggaact
cattttgatatagataaagatgcacaggtaacaatgaagccaaattcaggaacccttgtt
gtaaatattatgaatggtgtgaaggcagaagcatatgaaggagtgtaccagtgtacagca
aggaatgaaagaggagcagccatttccaacaatattgttatacggccatctaggtctcct
ttgtggacaaaagaaaaactagaaccaaatcatgttcgggaaggtgattctctagtacta
aactgcagacctcctgttggcttaccaccacctataatattttggatggataatgctttc
caaaggctgcctcaaagtgaaagagtttcccaaggtctcaatggagacctttacttttct
aatgtgcaaccagaggacacccgtgaggactatatctgctatgcgagatttaatcataca
caaactatacagcagaaacaacccatttctgtaaaagtcttttcaatggattcattgaat
gacactatagctgctaatttgagtgacactgatatttatggtgccaagccagttacagaa
aggccaccagtccttcttacaccaacaggcagcacaagtaacaaagtggaactgagagga
aatgttcttttgttggaatgcattgcagcaggattacccacgccagtaatccgctggatt
aaagagggcggtgaactgccagccaacagaacgttttttgaaaatttcaagaaaactctc
aagattatagatgtttctgaagctgactctgggaactacaaatgtatagcaagaaacata
ttaggttccactcatcatgtcatttcagtaactgtaaaagcttccccctactggataaca
gcacccaggaacttggtcttatctcctggagaagatgggacattgatctgcagagctaat
ggcaacccaaaacctagcataagctggttaacaaatggcgttcccatagcaattgcccca
gaagaccctagcagaaaggtagatggggataccatcattttctctgctgtgcaagagcgg
tcaagtgctgtttatcagtgcaatgcttctaatgagtatggatacttgctggcaaatgca
tttgtgaatgttcttgctgagccaccaaggattctaactcctgctaataaactgtatcaa
gtcatcgcagatagtcctgcattaatagactgtgcttattttggttcacctaagcctgaa
attgaatggtttaagggagtgaaaggtagcatcttacgtggaaatgagtatgtttttcat
gataatgggaccttggaaattccagtggctcagaaggatagtactggcacatacacatgt
gttgcgaggaataaattaggaaagacacaaaatgaagtacaattggaagttaaagaccca
acgatgataattaaacagccagaatacaaagtgattcagagatctgcccaggcttcattt
gagtgtgtaataaaacatgatcctaccttattgccaacagttatatggctgaaagacaat
aatgaactaccagatgatgaaaggtttctagttggtaaagacaacttgaccattatgaat
gtaactgataaagatgatggaacatatacttgcatagttaatactactctggacagtgtt
tcagcaagtgctgtgcttactgttgttgctgctcccccaactccagctatcatttacgct
cggccaaatccaccgcttgacttggaattgacaggtcagctagaaagaagcattgaactc
tcatgggtaccaggagaagaaaataacagtcccattacaaactttgtgattgagtatgaa
gatggattgcatgagccaggggtatggcattaccagacggaagttcctggatctcagaca
actgtacagttgaagttgtctccatatgtcaactattcattccgtgtgattgctgtcaat
gaaattggtagaagtcagccaagtgaaccatctgaacagtacctgacaaaatccgcaaac
cccgatgaaaatccttctaatgtacaaggaataggctcagaacctgataatttggtaata
acgtgggagtctttaaaaggctttcagtctaacggaccaggactccaatacaaagtcagc
tggcgccagaaggatgttgacgatgaatggacatctgtagtagttgcaaacgtgtctaaa
tatattgtgtctggtacaccaacttttgttccctatgaaataaaagtgcaggctttaaat
gacctgggatatgcaccagagccatcagaggttattggacactcaggggaagacttgcca
atggttgctccaggcaatgtgcaggttcatgtaattaacagcacattggcaaaggtgcac
tgggaccctgttccactaaaatctgtccgaggacatcttcaagggtataaagtttactac
tggaaagtacagagtctatccagaaggagtaagcggcatgtagaaaaaaagatcttgact
ttcaggggaaacaagacttttggaatgttaccagggctagagccctatagttcttacaag
ctgaatgttagagttgttaatggtaaaggagaaggaccagcaagcccagacaaaatgttt
aaaactcctgaaggagttcctagctcaccctcctttttgaagatcactaatccaacactg
gactctctgactctagagtggggttcacctacccatccaaatggtgttttgacatcatac
atactgaagtttcagccaattaacaacacgcatgaattaggtcccttggtagaaataaga
atacctgccaacgagagcagcttgatattaaaaaatttgaattacagcacacgatacaag
ttttactttaatgcacaaacatcagttggatcaggaagtcagataactgaggaagcagta
acaattatggatgaaggtaagatggccggtattcttcgtcctgctgtaggtgcaggcaaa
ggatattcagaaatcctttttgcaacctccccagtcatgcatactgtccgtccaactttc
tataaggtgcaaccactttatccaaggatcagaaatgttacaacagctgctgctgagacc
tatgccaatatcagttgggagtatgagggaccagatcatgccaacttttatgttgaatat
ggtgtagcaggcagcaaagaagattggaaaaaagaaattgtaaatggttctcgaagcttc
tttgtgttaaagggtttaacaccaggaacagcatataaagtccgagttggtgctgagggc
ctgtctggttttaggagttcagaggatctgtttgagacaggtccagcaatggcaagtcgg
caggtagacattgctactcaaggatggttcattggacttatgtgtgctgttgcacttctt
atcttgattttactgattgtttgcttcataaggaggaataaaggtggcaaatatccagtg
aaagaaaaggaggatgcacatgctgatccagaaatacagcctatgaaggaagatgatgga
acgtttggtgaatacaggtccatgtctgcttggacaggaaagaaaatggacaaggaaaag
aaaagaaaaggtagctgtgcaagttcttctgaagcagaccctgtctttaccaaagcaaag
tctgtgagatctgacagatccagcttcttcagaaggtcaggggatcaatactccaacgtc
agatcagagacctccttcaccaggaggaaggctaggcagtcttcagagcttagaagggct
agttctgtctctgcttccctctgccaagaggaaaagaggtcagacaaatggatatacagg
catggctctagatgtcatgcttctgagcaacaaataatgggtttggatgagggttcaaat
tctcaggcaggacatccacaccctttccaccaacccctcagctgcaactcaattcatggc
tcactggcaaggcagcattcttctctcctgcaccggttcagccagaccccagactactac
agctcagattcagaagacactcagagctccaaacacaggaaggtaagaccttctgctact
actcatttctctgaatctgaaaagaattcattaatgaaatctgtaattttgcctgagcta
gctactgtcttaaaggatgcactcacagcagccagacaaagtataacttctgtggcacag
actaggtcccactcaataaagcatcctaggataccaattacagaagttccagtggttcct
ctagaagaaatgggaagcagttcccaaacttttgagtctgatcaaataggcagtatcaaa
aatcaagcaacttctgggaaggagagagttgatgcttacaaggatttggaggttgattca
tcccttgaagatgatgaggtgtcatctgaatcccctgcagaagatgaagaaggaccagat
gctgaacgtaagtttggcatggaaaatcagagttatctgttcaagcacattaaaagggtg
ttaatgctgaaaacttccaaaggtgaatgcccttcagaagaaatgcctgtattatctgaa
gaaggcaaggtagataatgcacttcctatccattcaacagtggaaaatttcatctgtagg
atctggggtaatcctgaggcaaaacacaaagctccagaaatcctacataagctgtatccc
cttccagtggataaagctgctttgtgggggaccttgcctacggtagacaggccattgatt
actgctgattctgtgctttcaacgtctgctaacatggatgctctccctaaagatcttact
gatagaaaaattgaagaagaaatcaaaagatctttcagtctggttgcagcccagcttgga
gtgtctatctactgcacttatgcttctaaagcattactattatggctggaggaagaacaa
gccagagttaaaagaaaatgtgtcccatctggtgccatacagaggaagcacagactgtgt
aaacttgcagctaactttatccatgatgcagctgaggattctcttagactcacagttaaa
aatgttgcatgcctcacagtagcctggagagctatatggctgcgtccttggacctcatca
ctagatctcagatgtcagctgctctctctaccatacactggtggcaagctatttggtgaa
tccttggtccagatcctgaaggactttgcagaacacaaacattccttacatcggatgaaa
aaaaaatgctcttttggcagctcgttttcttatcctcacaagtctcagagttcctttcgt
tctcctccaaagtttaaaggaggaaagggaaaatacaaagtctcacaatcttttcatgcc
agctatgaaaggacatctcgttttcaaagagataccagaccatcaagaggaactttctaa
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integrated database retrieval system