Tympanuchus pallidicinctus (lesser prairie-chicken): 128073702
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Entry
128073702 CDS
T08967
Name
(RefSeq) unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128073702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128073702
04131 Membrane trafficking [BR:
tpai04131
]
128073702
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128073702
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpai04812
]
128073702
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128073702
mRNA cycle factors
P-body specific factors
128073702
Membrane trafficking [BR:
tpai04131
]
Others
Actin-binding proteins
Myosins
128073702
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128073702
Cytoskeleton proteins [BR:
tpai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128073702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
DUF4145
nSTAND3
AAA_22
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
128073702
NCBI-ProteinID:
XP_052524829
LinkDB
All DBs
Position
Unknown
AA seq
1724 aa
AA seq
DB search
MAAGQPYGQGARVWIPDSIHVWRAAEITKGYEEGDSILHLRLEDGSPLVYPLGSQLPPLC
NPECLSGKDDLVALSHLHEPAVLHSLRVRFLEANAIYTYCGIILVAINPYKLLPIYEDEV
IYAYSGREMGDMDPHIFALAEEAYRQMVRFGRNQSLIISGESGAGKTASAKYAMRYFTTV
GGGLGDSSMEEKVLASSPLMEAFGNAKTTRNDNSSRFGKYIEIGFSHARVMGATIKTYLL
EKSRVTFQAKAEQNYHIFYQLCASAALPELQALHLRGAETFYYTQQGRCSAGADDASDLD
STRLAFSLLGVPEVDQLELFAVLAAILHLGNVTIRGRDRHGDGCFVEPNSEALGLFCALL
GIEEVQVTRWLCHRKLVTAGETYMKPLSRQQALDCRDALAKHMYGQVFRWMTSRVNRALR
SPEGHHTSIGILDIYGFEMFDLNSFEQFCINYANEKLQQLFNLHVFKLEQEEYVAEEIPW
VFIDFCDNQPCIELIEGRLGVLDLLNEECKMPQGSDGSWAQKLYQTHLGSSHFQKPKRPT
DAFIVCHFAGKVEYQCDGFVEKNRDTIPEELVGLLRASKSVLLAELFLEDGDGPTSRRSS
GSRSARPSRRSIPGTQKSKKSISSQFKSSLHRLMETLGSTTPHYVRCIKPNDSKLPFVFD
SRRAVEQLRACGVLETIRISAAGYPSRWTYQEFFERYRALLSKEELVGDDAKQSCSLALE
RLLQDPSMYCCGKSKVFFRAGQVAFLEELRCRRLRAACTLLQRHLRGWLARRRFGRIRAA
ALCLQRHTRGLLARRLTAELRRSRAAVVLQKNVRMALARRSYLRVRRAALTIQAFGRGMF
ARRLYRQMVQHQKAVVLQAAVRGWLARLHYSRLRRAVLYLQCCYRRARARRELQRLRAEA
RSVEHYKQLHKGMEIKVMQLQRRLDEQAQEKQRLAEQLLALNAAHAEEVQRLREEMRWLR
EDAAHDAQVQRLQERLAELERNSAESRLAQEVEELRQRLAEVEAVKLHLGEEKDALIQRT
LEQSQDLEEQHQRAARESRGLQQELEEERARYQSLVQDYARLEQGYENLRDEVAFHRQST
FRRSPSSESFLGSESSYMSSMSTAPSRDGSDLQAEGQEERWQPPTEVPQPPHPMEDPMPN
AAVGQDRFEKAYLLLLGQLNAVTEELARTREELGRSKASAEHEERKPLDFLKRRNIAEML
GLGRSPEKAAGDDLKHAYDAVQVANKLLVSQLQEEKQHHEEEVEGLHLDIRSLKQLSQQQ
AALIQDLQRHQGQEGLQHHVVRLKEENWELSQKLERQERTTLKLQKQLRTYMKQIQEFTA
MKKEPPTPGQEPAASLRVPSSSGPPQAMLAWRLEDEGRIIKAIITDYRLQSSPGAMPELP
AYVLFLCIRHADHCRDEPRAHSLLDAAINAIKRVMKKHSDDFDMVALWLANACRLLNCLR
QYGRDESCHQGNTAHQNEHRLRNLDPQGPYHSLGALAVQLYQQLIRTAEKRLKPMIVSAM
LESETIQGLSSSCPPTHRLSSAPPAHTLPELLQQLGSFHHTLEHYGLSPAVGHQLLRQLL
FLISGTTLNFLLLRKDACSWSRGIQLRYNVSQVEQWLRAQGLQQSGAREMLEPLIQAAQL
LQVKKATEEDAAAICSLCTVLTPQQVVKILRAYTPTAGLEERVSPAFISSVENRLQEQQA
EGPSQLLVDTSHFFPVQLPFIPSPLHLDELCIPNTVDLAFLVRL
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagggcagccctacgggcagggtgcccgggtctggattcctgactctatccat
gtctggagagcagcagaaataaccaaaggctatgaggaaggagactccatcctgcacctc
cgcctggaggatggctcgcctctcgtttaccccctgggctctcagctgccccctctctgc
aaccctgagtgcctctcaggcaaggatgacctggtggctctgagccacctgcacgagccg
gcagtgctgcattcgctccgtgtgcgcttcctggaggccaacgccatctacacctactgc
ggcatcatcctggtggccatcaacccctacaagctgctgcccatctatgaggatgaggtg
atctacgcctacagcggccgggagatgggggatatggacccccacatctttgcgttggca
gaggaggcctacaggcagatggtgaggtttggtaggaaccagtccctcatcatcagtggt
gaatcaggagcagggaaaaccgcctcagccaaatatgccatgagatatttcaccacggtc
gggggtggtctgggggactccagcatggaggagaaggtgctggcctccagtccgctcatg
gaggcctttgggaacgccaagactaccaggaacgacaacagcagccgcttcgggaagtac
atcgagattggcttcagccatgcccgtgtgatgggggccaccatcaagacctacctgctg
gagaagtcccgtgtcaccttccaggcaaaagcggaacagaactaccacatcttctaccag
ctctgtgcgtcagctgccctgcctgagctgcaggctctgcatctgcgtggagcagagacc
ttctactacacccagcagggccgctgcagcgcaggcgctgatgatgcatctgacctggac
agcacgcggctcgccttctccctgctgggtgtccctgaggttgaccagctggagctcttt
gccgtccttgctgccatcctgcatctgggcaacgtcaccatcagagggagggaccgccat
ggggacggctgctttgtggagcccaacagtgaggccttggggctgttctgtgcgctgctg
ggcatcgaggaggtgcaggtgactcgctggctctgccaccgcaagctggtgacggcgggt
gagacctacatgaagccactcagcaggcagcaggcgctggactgccgggatgccctggcc
aagcacatgtatgggcaggtcttcaggtggatgacaagcagggtcaaccgtgccctgcgc
tcgccggagggccaccacacctccatcggcatcctggacatctatgggtttgagatgttt
gacctcaacagctttgagcagttctgcatcaactacgccaatgagaagctgcagcagctc
ttcaacctgcacgtcttcaagctggagcaggaggaatacgtggctgaggagatcccatgg
gtcttcattgacttctgtgacaaccagccatgcattgagctcatcgagggtcgactgggc
gtgctggacctgctgaatgaggagtgcaagatgccccagggcagtgatgggagctgggcc
cagaagctgtaccagacccacctcggcagctcccacttccagaagcccaagaggccgacg
gatgccttcattgtgtgccactttgctggcaaggtggaatatcagtgtgatgggtttgtg
gagaagaacagggacaccatccccgaggagctggtggggctgctgagagccagcaagtct
gtgctgctcgctgagctcttcctggaggatggcgatggccccacatcccgcaggtccagt
gggtccaggtccgcccgccccagccgcaggtcaattcctggtacccagaagagcaagaag
tccatctccagccagttcaaatcctccctgcaccggttgatggagacgctgggcagcacc
acaccacactacgtgcgctgcatcaaacccaacgacagcaagctgccctttgtctttgac
tccaggagagcagtggagcagctgagagcttgtggagtgctggaaaccatccggatcagt
gctgctggttacccctccaggtggacctaccaggagttctttgagaggtacagggcactg
ctgagcaaggaggagctggtgggtgatgatgcaaagcagagctgcagccttgccttggag
agactgctgcaagaccccagcatgtactgctgcgggaagagcaaggtgttcttccgtgct
ggccaggtggcattcctggaggagctgcggtgccgccggctgcgtgcagcctgcaccctg
ctgcagaggcacctgcggggctggctggcacggcgccgcttcgggcgcattcgcgctgca
gctttgtgcctgcagcgtcacacccggggcttgttggcacgcaggctcaccgctgagctg
cggaggagcagagctgcggtggtgctgcagaagaacgtgaggatggcgttggctcggcgc
tcctacctgcgtgtgcgccgggctgctctcaccatccaagccttcggccgggggatgttt
gctcgacgcctctaccgccagatggtgcagcaccagaaagctgtggtgctccaggctgct
gtgaggggctggttggcccgcctgcactacagccgtctgcgcagggctgtgctctacctg
cagtgctgctaccgccgggcgcgggcgcgccgtgagctgcagcggctgcgggctgaagcg
cgctcagtagagcactacaagcagctgcacaaaggcatggagatcaaggtgatgcagctg
cagcgcaggctggatgagcaggcccaggagaagcagcgattggcagagcagctcttggca
ctgaacgctgctcacgctgaggaggtgcagcggctgcgggaggagatgcggtggctgcgg
gaggatgcggcacacgatgctcaggtgcagcggctgcaggagcggctggccgagctggag
aggaacagtgctgagagccgcctggcccaggaggtggaggagctccgacagcgcctggca
gaagtggaagcagtgaagctgcacctgggggaggagaaggatgctctgattcagcgcacc
ttggagcagtcgcaggatctagaagagcagcaccaacgtgcggcacgggagagccggggg
ctgcagcaggagctggaggaggagcgggcgcgctaccagagcctggtgcaggattatgcc
cgcctggagcagggctacgagaacctgcgggatgaggtggccttccataggcaaagcacc
ttcaggcgttctccttcatccgagagcttcctgggctctgagagcagctacatgtcctct
atgtccaccgccccttctcgggatggctctgacctacaggctgaggggcaggaggagcgc
tggcagccaccaactgaggtcccccagcctccccaccccatggaggaccctatgcctaac
gctgctgtggggcaggaccgctttgagaaggcgtatctgctgctgctggggcagctcaat
gctgtcactgaggagctggcccgcacccgggaggagctggggaggagcaaagcatctgct
gagcacgaggagaggaaacccctggatttccttaagagaaggaacatcgctgagatgctg
ggactgggcaggagccctgagaaggcggcgggggatgacttgaagcacgcctacgatgcg
gtgcaggtggccaacaagctgttggtgagccagctgcaggaggagaagcagcaccacgag
gaggaggtggaggggctgcacctcgacatccgttcactcaagcagctgagccagcagcag
gcagccctcatccaggacctgcagaggcaccagggccaggaggggctgcagcaccacgtt
gtgcgcctgaaggaggagaactgggagctgtcccagaagctggagagacaggagaggacc
acgctgaagctgcagaagcagctgagaacctacatgaagcagatccaggagtttacagca
atgaagaaagagccccccacgccggggcaggagccagcagcatccctcagggtcccatcc
tcatcagggccgccccaggccatgctggcatggaggctggaggacgaagggcgcatcatc
aaggccatcatcacagattatcgcctgcagagcagccctggggcaatgccagagcttcca
gcctacgtcctcttcctctgcatccggcacgcagaccactgccgtgatgagccacgtgcc
cactcactgctggatgcagccatcaatgccatcaagagggtcatgaagaagcacagtgat
gactttgacatggtggcactctggcttgcaaatgcctgccggctcctgaactgcctgcgt
cagtacggccgggatgagagctgccaccaggggaacacagcacaccagaatgagcatcgc
ctgcgcaacctggaccctcagggcccctaccacagcctgggagcgttggcagtgcagctg
taccagcagctcatccgcacggctgagaagcgcctcaagcccatgattgtctctgcaatg
ctggagagtgagaccatccaaggcctctcctcctcctgccctcccacccaccgcctctcc
tcggcccccccagcccacacgctgcccgagctcctgcagcagctgggctccttccaccac
acgctggagcattatgggctgtccccagccgtggggcatcagctgctgcgccagctcctc
ttcctcatcagcggcaccaccctcaacttcctgctgctgaggaaggacgcctgctcctgg
agccgtggcatccagctcaggtacaacgtcagccaggtggagcagtggctgcgggcgcag
gggctgcagcagagcggtgcccgtgagatgctggagcctctgatccaggctgctcagctg
ctgcaggtgaagaaggcgacagaggaggacgcggcggccatctgcagcctgtgcaccgtg
ctgaccccacagcaggtggtgaagatcctgcgggcgtacaccccgactgctgggctggag
gagcgtgtgagccctgccttcatcagcagcgtggagaaccgactgcaggagcagcaggca
gagggaccaagccagctcctggtggacaccagccacttcttccctgtgcaactgcccttc
atcccctccccgctgcacctggatgagctctgcatccccaacaccgtggacctggccttc
ctcgtgcgcctctga
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integrated database retrieval system
