Tympanuchus pallidicinctus (lesser prairie-chicken): 128073777
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Entry
128073777 CDS
T08967
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128073777 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128073777 (CNOT2)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128073777 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128073777 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
128073777
NCBI-ProteinID:
XP_052524929
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MGLQEKEDAGITINIRSAVSVWGKFIRATKGILPMNPRNMMNHSQVGQGIGIPSRTNSMS
SSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGS
ENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPASEQSQDFSIHNED
FPALPGSSYKDPTSSNDDNKSNLNTSGKTSSSTDGPKFPGDKSSTTQNNNQQKKGIQVLP
DGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKF
ASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLL
AAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYD
KLEERPHLPSTFNYNPAQQAF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggacttcaagagaaggaagatgctggcatcaccatcaacatcaggtcagctgtctca
gtttggggcaagtttatacgggcaacaaaggggatattgcctatgaatcctaggaatatg
atgaaccactcccaggttggtcagggcattggaattcccagcaggacaaacagcatgagc
agttcagggttaggcagccctaacagaagctctccaagcataatatgtatgccaaagcag
caaccctctcgacaaccttttactgtgaacagtatgtctggatttgggatgaacagaaat
caggcatttggaatgaataactccttatcaagtaacatttttaatggaacagatggaagt
gaaaatgtgacaggactggacctctcagattttccagcactagcagacagaaacagaagg
gaaggaagtggcaatccaactccattaataaaccctttagctggaagggctccctatgtt
gggatggtaacaaaaccagcaagtgagcagtcccaggacttttcaatacacaatgaagat
ttcccagcattaccaggctccagctacaaagacccaacatcaagtaatgatgataataaa
tctaatttgaatacatcaggcaaaacatcatccagcacagatgggcccaagtttcctgga
gataaaagttcaactacgcaaaacaacaaccagcagaaaaaagggatccaggtgttacct
gatggtcgggttaccaacattccacaagggatggtgacggaccagtttggaatgattggc
ttgttaacattcatcagggcagcagagacagatccaggaatggtacatcttgcattagga
agtgatttaacaacactaggtctcaatctcaactctcctgaaaatctttatcccaaattt
gcatcaccttgggcatcatcaccttgtcgacctcaagacatagacttccatgttccatct
gagtacttaactaacattcacattagggataagctggctgcaataaaactcggccgatat
ggagaagatctcctgttttatctctattacatgaatggaggagatgtattacagctatta
gcggcagtagagctatttaaccgggattggagataccacaaagaagaacgagtatggatc
accagggcacccggaatggagccaacaatgaaaaccaatacgtacgagaggggaacatat
tacttctttgactgtcttaactggaggaaagtagctaaggagttccatctggaatatgac
aaattagaagaaaggcctcatctgccatcaaccttcaactacaaccctgctcagcaagcc
ttctaa
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