Tympanuchus pallidicinctus (lesser prairie-chicken): 128073785
Help
Entry
128073785 CDS
T08967
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128073785 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128073785 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tpai00537
]
128073785 (CNTN1)
Cell adhesion molecules [BR:
tpai04515
]
Immunoglobulin superfamily
Contactins
128073785 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tpai00537
]
Others
128073785 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
Interfer-bind
Tissue_fac
DUF4998
Fn3-I_PB4
Big_3_4
Motif
Other DBs
NCBI-GeneID:
128073785
NCBI-ProteinID:
XP_052524940
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MRFFISHLVTLCFIFCVSDSTHFSEEGNKGYGPVFEEQPIDTIYPEESSDGQVSMNCRAR
AVPFPTYKWKLNNWDIDLTKDRYSMVGGRLVISNPEKSRDAGKYVCVVSNIFGTVRSSEA
TLSFGYLDPFPPEEHYEVKIREGVGAVLLCEPPSHYPDDLSYRWLLNEFPVFIALDRRRF
VSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQADRAKVYPADIKVKFK
DTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLKIFNIQYEDEGLYE
CEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIRWLKNGV
SFRKGELRIQSLTFEDAGMYQCIAENTHGIIYANAELKIVASPPTFELNPMKKKILAAKG
GRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCFAENN
RGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDF
EKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG
IRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTEPSDIEGNMESARVV
DLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMP
LSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMPPSTQYQVKVKAFNN
KGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHVTEKSVEGYQIRYWAAHD
KEAAAQRVQVSNQEYSTKLENLKPNTRYHIDVSAFNSAGYGPPSRTVDIITRKAPPSQRP
RIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHEGKLFSTGKHTIEVPVPSD
GEYVVEVRAHSEGGDGEVAQIKISGATAGVPTLLLGLVLPALAVLAYSGF
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcttcatcagtcatcttgttacactctgtttcatcttctgtgtgtcagactct
acccatttttcagaggaaggaaacaaaggttatggacccgtttttgaggagcaaccaatt
gataccatctatccagaagaatcttcagatggacaagtttcaatgaactgcagggctcga
gctgttccttttcctacttacaagtggaaactcaacaactgggatattgatttaacaaag
gatcgctacagtatggtaggaggcagacttgttatcagtaatccagagaaatcaagggat
gctggaaaatatgtctgtgtagtatcgaatatctttggaactgtcagaagcagtgaagcc
actctgagttttggatatctggatccttttccaccagaggaacactatgaggttaaaata
cgagaaggtgttggagcagtgcttctttgtgagcctccttcccactacccagatgatctc
agttatcgctggcttctaaatgaattcccagtattcattgctttggacagacgacggttt
gtgtctcagacgaatggcaatctctacattgcaaatgtagaagcatcagataagggcaat
tattcgtgttttgtgtccagcccttcaataacaaagagcgtattcagtaaatttattcca
cttattccacaggccgatcgtgccaaagtgtatcctgctgatatcaaggtgaagttcaag
gacacatatgctctcctggggcaaaatgtgacactggagtgttttgctcttggaaatccg
gttcctgaactcagatggagtaaataccttgaacctatgccagctactgctgagataagc
atgtctggggcagttcttaagatctttaatattcagtatgaagatgaaggactttatgag
tgcgaagctgaaaactataaaggaaaagataaacatcaagcaagagtttatgtgcaagcc
tctccagagtgggtagaacatatcaacgacacagagaaggatataggcagtgatctctac
tggccatgtgtagctacaggcaagcctattccaacaattaggtggttgaagaatggagtc
tcgttccgaaaaggtgaactacgaattcaaagcctgacctttgaagatgctggcatgtat
caatgtatagcagaaaacacacatggaattatttatgcaaatgctgaactgaagattgtg
gcttcacctcctacttttgaactgaaccctatgaagaagaaaatcctagcagctaaaggg
gggcgtgtaatcattgaatgcaaacctaaagctgctcctaagccaaaattctcctggagc
aaaggaacagaattgcttgtaaatgggagccgcatacgtatttgggatgatgggagccta
gaaattatcaatgtcacaaagttggatgaaggccgctacacctgttttgccgaaaataac
cgaggaaaagctaatagcactggtgttctggaaatgacagaagctacaaggattacttta
gcaccactgaatgttgatgtcaccgttggagagaatgctaccatgcaatgcattgcatcc
catgatcccacattagacctgacatttatttggtccctaaatggttttgtaatagatttt
gagaaagagcacgaacattatgaaaggaatgtaatgattaaatccaatggtgagctgctc
attaaaaatgttcagctgcggcatgctggaagatacacatgcactgcccagacaattgtt
gacaactcttcagcttcagctgaccttgttgtaagaggtcctccaggccctccaggaggt
ataagaatagaagaaattagagacactgctgtagcacttacctggagtcgtggaacagac
aatcatagccctatttctaaatacactatccagtcaaaaactttcctatctgaagagtgg
aaagatgccaaaacagagccatcagatattgaaggaaacatggaatctgctagagtggtt
gacttaattccgtggatggaatatgagttccggataatagcaacaaacactttgggaaca
ggggaaccgagtatgccatcccagaggatcagaactgaaggcgctcctcctaatgtggct
ccttctgatgttggaggaggaggtggaagcaatcgagagctgacaataacatggatgcct
ttgtcaagggaataccactatggcaataactttggttacatagtggctttcaagccattt
ggtgagaaagaatggagaagagttacagttactaatcctgaaattggccgttatgtccac
aaggatgaatcaatgcctccttccacccagtaccaagtaaaagtgaaagcttttaacaac
aaaggggatggaccattcagtctcactgctgtcatttattcagcacaggacgctccaact
gaggtacctacagatgtgagcgtgaaagttttgtcatcttctgaaatttctgtttcttgg
catcatgttactgagaaatctgtggaaggatatcagattcgttactgggctgctcatgat
aaagaagcagctgcacagagggtacaagtaagcaatcaagagtattcgaccaaactggaa
aacttgaagcctaatacacgctaccacatagatgtgtctgccttcaatagtgcaggctat
ggacctcccagtagaaccgttgacattattaccaggaaagcacctccaagccaacgtcca
agaatcatcagttctgtaagatctggttcaaggtacatcatcacctgggatcatgtgaag
gcaatgtcaaatgagtctgcagttgaaggatacaaagtgctatatagaccagatggacaa
catgaaggcaagttgttttcaactggaaaacacacaatagaggtcccagttcccagtgat
ggtgaatatgttgttgaggtccgagcacacagtgaaggaggagatggagaagtagctcaa
attaaaatttcaggtgccactgctggagtgccgactctgcttctgggcctggtgctgcct
gccctcgctgtccttgcctactcgggattctga
DBGET
integrated database retrieval system
